Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_F09
         (456 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    26   0.15 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   1.0  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   2.4  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    21   5.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.5  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   5.5  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   7.2  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    20   9.5  

>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 26.2 bits (55), Expect = 0.15
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 372 KDNKKFKKGTSKLKHGYYYSALSNDY 295
           +  + F K  S++ + Y+YS LSN Y
Sbjct: 232 RKRRNFSKQASEILNEYFYSHLSNPY 257


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -1

Query: 369  DNKKFKKGTSKLKHGYYYSALSNDYNIININSQLII 262
            D   F +  S+   G Y   + NDY   ++  QLI+
Sbjct: 1358 DGSLFIRDVSRNNAGEYSCHVENDYGQDSVTHQLIV 1393


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -2

Query: 311 LCPMTIISLI*IHN*LFIEHSSHCAGHWTPNASYFFF 201
           LC M+++++I IH     E  S   G W   A   F+
Sbjct: 280 LCNMSLLTVIPIHVWTSKEKISFLRGFWLSPAVDMFY 316


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 224 VSSVLHSERNAL*IINC 274
           V  +LHS+R  L  INC
Sbjct: 43  VDRILHSKRLLLNYINC 59


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = +1

Query: 7    AKRQLVTLFSAPNYCGEFDNAGGMMSVDE 93
            A R L      P   GEF  AGG ++  E
Sbjct: 2576 ADRGLNAKSYGPGEAGEFTRAGGFLAYYE 2604


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 369 DNKKFKKGTSKLKHGYYYSALSN 301
           D+K  K  +SK K  YYY ++ +
Sbjct: 226 DHKWKKNDSSKKKTRYYYRSVDD 248


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +1

Query: 34  SAPNYCGEFDNAGGMMSVDETLMC 105
           SAP+ CGE  +   +  V     C
Sbjct: 33  SAPSICGEHGHCVNLPGVGHRCQC 56


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 319 IIAVFQFTCAFFKLFIVLVSDINL*KI 399
           I  VF F   FF  +I  + + N+ +I
Sbjct: 35  IFVVFSFAVTFFSAWICALVNYNVSEI 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,815
Number of Sequences: 336
Number of extensions: 2358
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10406187
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)