Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_F09
(456 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0457 - 3263519-3263749,3264565-3265175,3265966-3266143 98 3e-21
02_05_1246 - 35226759-35226860,35227521-35227715,35227804-352283... 90 9e-19
01_03_0220 - 13905808-13905831,13906694-13906885,13906960-139075... 87 6e-18
03_02_0491 + 8854438-8854657,8854897-8854942,8855268-8855307,885... 53 1e-07
03_05_0488 - 24847076-24847220,24847823-24847872,24848139-248482... 40 0.001
09_02_0241 + 6179869-6180116,6180406-6180436,6182038-6182190,618... 38 0.003
10_07_0165 + 13740611-13740706,13741159-13741215,13741523-137416... 36 0.020
03_06_0366 + 33408671-33408745,33409342-33409398,33410398-334104... 36 0.020
03_01_0473 - 3639533-3639598,3639848-3639955,3640037-3640126,364... 36 0.020
01_06_0339 + 28549449-28549529,28549768-28549914,28550027-285500... 34 0.062
06_03_0542 + 21959533-21959785,21960732-21960846,21962815-219629... 33 0.11
02_02_0075 - 6572385-6572558,6573416-6573607,6574553-6574630,657... 33 0.11
05_01_0319 + 2503963-2504176,2504316-2504376,2504691-2504769,250... 32 0.25
05_02_0083 + 6450694-6450766,6451391-6451560,6451633-6451704,645... 31 0.33
12_01_0961 + 9566730-9566998,9567096-9567187,9567294-9567427,956... 28 3.1
01_06_1547 - 38150814-38151488,38151608-38151666,38151774-381519... 28 4.1
06_01_0911 - 7031099-7031779,7031896-7032221,7032306-7032318,703... 27 5.4
04_04_0481 - 25541355-25541849,25541933-25542535,25542730-255428... 27 5.4
12_02_0629 - 21360831-21361310,21361391-21361663,21362212-213624... 27 9.5
03_03_0246 + 15789635-15794227,15794314-15794555,15794630-157947... 27 9.5
03_02_0771 + 11041882-11042073,11042669-11042851,11042946-110430... 27 9.5
03_01_0265 + 2046918-2049102,2052385-2052452,2052542-2052652,205... 27 9.5
>06_01_0457 - 3263519-3263749,3264565-3265175,3265966-3266143
Length = 339
Score = 97.9 bits (233), Expect = 3e-21
Identities = 45/64 (70%), Positives = 51/64 (79%)
Frame = +1
Query: 1 FFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYNGINSGRPA 180
FFAKRQLVT+FSAPNYCGEFDNAG MMS+D++L CSFQILKPS+KK K N +P
Sbjct: 271 FFAKRQLVTIFSAPNYCGEFDNAGAMMSIDDSLTCSFQILKPSDKKGKAGTG--NMSKPG 328
Query: 181 TPQR 192
TP R
Sbjct: 329 TPPR 332
>02_05_1246 -
35226759-35226860,35227521-35227715,35227804-35228363,
35229299-35229476
Length = 344
Score = 89.8 bits (213), Expect = 9e-19
Identities = 39/45 (86%), Positives = 42/45 (93%)
Frame = +1
Query: 1 FFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEK 135
FFA RQLVT+FSAPNYCGEFDNAG MMSVD+TLMCSFQILKP+ K
Sbjct: 254 FFANRQLVTIFSAPNYCGEFDNAGAMMSVDDTLMCSFQILKPARK 298
>01_03_0220 -
13905808-13905831,13906694-13906885,13906960-13907519,
13910007-13910187
Length = 318
Score = 87.0 bits (206), Expect = 6e-18
Identities = 37/61 (60%), Positives = 49/61 (80%)
Frame = +1
Query: 1 FFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYNGINSGRPA 180
FFA+R+LVT+FSAPNYCGEFDNAG ++S+DE+LMCSFQILKP++ A + ++ P
Sbjct: 255 FFAQRRLVTIFSAPNYCGEFDNAGALLSIDESLMCSFQILKPNDTGAPHSRKPTSNKTPK 314
Query: 181 T 183
T
Sbjct: 315 T 315
>03_02_0491 +
8854438-8854657,8854897-8854942,8855268-8855307,
8856025-8856090,8856237-8856318,8857036-8857595,
8857681-8857771,8858300-8858316
Length = 373
Score = 53.2 bits (122), Expect = 1e-07
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +1
Query: 1 FFAKRQLVTLFSAPNYCGEFDNAG 72
FFA RQLVT+FSAPNYCGEFDNAG
Sbjct: 346 FFADRQLVTIFSAPNYCGEFDNAG 369
>03_05_0488 - 24847076-24847220,24847823-24847872,24848139-24848278,
24848358-24848493,24848584-24848683,24848837-24848949,
24849034-24849132,24849227-24849311,24849799-24850037,
24850202-24850372,24850544-24850784,24850899-24851172,
24851481-24851660,24852170-24852251,24852336-24852437,
24853315-24853384,24853725-24853824,24853931-24854025,
24854105-24854184,24854361-24854439,24854603-24854663,
24855570-24855984
Length = 1018
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +1
Query: 4 FAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKP 126
FA+ L+TLFSA NYCG +NAG ++ + L+ +++ P
Sbjct: 892 FAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHP 932
>09_02_0241 +
6179869-6180116,6180406-6180436,6182038-6182190,
6182921-6182983,6183396-6183664,6184055-6184133,
6184213-6184263
Length = 297
Score = 38.3 bits (85), Expect = 0.003
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = +1
Query: 16 QLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYNGINSGRPA 180
++VT++SAPNYC N ++ +DE L F++ + A ++ G+ + RPA
Sbjct: 242 KIVTVWSAPNYCYRCGNVAAILELDENLNKQFRVF----EAAPHESRGVPAKRPA 292
>10_07_0165 +
13740611-13740706,13741159-13741215,13741523-13741681,
13742315-13742398,13742496-13742567,13742810-13742881,
13743085-13743125,13743296-13743362,13744033-13744224,
13744314-13744403,13744742-13744849,13745089-13745154
Length = 367
Score = 35.5 bits (78), Expect = 0.020
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +1
Query: 10 KRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAK 144
++++VT+FSAPNYC N ++ VD+ +F +P+ ++ +
Sbjct: 311 EQKVVTIFSAPNYCYRCGNMASILEVDDCRNHTFIQFEPAPRRGE 355
>03_06_0366 +
33408671-33408745,33409342-33409398,33410398-33410481,
33410575-33410646,33410768-33410839,33411011-33411051,
33411517-33411583,33411673-33411864,33411947-33412036,
33412111-33412218,33412513-33412578
Length = 307
Score = 35.5 bits (78), Expect = 0.020
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +1
Query: 10 KRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAK 144
++++VT+FSAPNYC N ++ VD+ +F +P+ ++ +
Sbjct: 251 EQKVVTIFSAPNYCYRCGNMASILEVDDCREHTFIQFEPAPRRGE 295
>03_01_0473 -
3639533-3639598,3639848-3639955,3640037-3640126,
3640203-3640394,3640952-3641018,3641472-3641512,
3641762-3641779,3641984-3642055,3642154-3642237,
3642296-3642373,3642703-3642759,3643374-3643469
Length = 322
Score = 35.5 bits (78), Expect = 0.020
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +1
Query: 10 KRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAK 144
++++VT+FSAPNYC N ++ VD+ +F +P+ ++ +
Sbjct: 266 EQKVVTIFSAPNYCYRCGNMASILEVDDCNSHTFIQFEPAPRRGE 310
>01_06_0339 +
28549449-28549529,28549768-28549914,28550027-28550094,
28550771-28550828,28551474-28551584,28551668-28551718,
28552308-28552451,28552570-28552665,28552781-28552852,
28553392-28553475
Length = 303
Score = 33.9 bits (74), Expect = 0.062
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 4 FAKRQLVTLFSAPNYCGEFDNAGGMMSVDETL 99
F + LVT++SAPNYC N ++S ET+
Sbjct: 245 FQDKGLVTVWSAPNYCYRCGNVASILSFSETM 276
>06_03_0542 +
21959533-21959785,21960732-21960846,21962815-21962923,
21963027-21963104,21964200-21964391,21964995-21965168
Length = 306
Score = 33.1 bits (72), Expect = 0.11
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +1
Query: 13 RQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKK 138
+ +VT+FSAPNYC N ++ + E + +F P+ ++
Sbjct: 251 KNVVTVFSAPNYCYRCGNMAAILEIGENMDQNFLQFDPAPRQ 292
>02_02_0075 -
6572385-6572558,6573416-6573607,6574553-6574630,
6574712-6574820,6575442-6575556,6576280-6576535
Length = 307
Score = 33.1 bits (72), Expect = 0.11
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +1
Query: 13 RQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKK 138
+ +VT+FSAPNYC N ++ + E + +F P+ ++
Sbjct: 252 KNVVTVFSAPNYCYRCGNMAAILEIGENMDQNFLQFDPAPRQ 293
>05_01_0319 +
2503963-2504176,2504316-2504376,2504691-2504769,
2504861-2504940,2505046-2505140,2505748-2505847,
2506647-2506716,2507657-2507758,2507972-2508053,
2508257-2508304,2508841-2509009,2509089-2509314,
2509961-2510131,2510200-2510438,2510600-2510684,
2510778-2510876,2510954-2511153,2511232-2511307,
2511463-2511675,2511763-2511815,2511999-2512151,
2512474-2512606
Length = 915
Score = 31.9 bits (69), Expect = 0.25
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +1
Query: 4 FAKRQLVTLFSAPNYCG 54
FA QL+TLFSA NYCG
Sbjct: 762 FAHGQLITLFSATNYCG 778
>05_02_0083 +
6450694-6450766,6451391-6451560,6451633-6451704,
6451893-6452043,6452709-6452817,6452906-6453023,
6453214-6453361,6453520-6453768,6454209-6454334,
6454474-6454574,6454728-6454802,6455160-6455219
Length = 483
Score = 31.5 bits (68), Expect = 0.33
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 16 QLVTLFSAPNYCGEFDNAG 72
+L+T+FSAPNYC + N G
Sbjct: 426 KLITVFSAPNYCDQMGNKG 444
>12_01_0961 +
9566730-9566998,9567096-9567187,9567294-9567427,
9567542-9567591,9569026-9569100,9569179-9569734
Length = 391
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 131 RKRQSISTTVSTVGGRPRLNGHHRKRNNW 217
R+R+ STT S+ GG + RKR +W
Sbjct: 67 RRRRRASTTSSSAGGGGSAGSNTRKRRSW 95
>01_06_1547 -
38150814-38151488,38151608-38151666,38151774-38151919,
38152078-38152274,38152542-38152920,38153000-38153031
Length = 495
Score = 27.9 bits (59), Expect = 4.1
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -1
Query: 348 GTSKLKHGYYYSALSNDYNIININSQLI 265
G + L H Y ++ + N Y+I+NI+ L+
Sbjct: 280 GNAALLHRYGFTEMDNSYDIVNIDLALV 307
>06_01_0911 -
7031099-7031779,7031896-7032221,7032306-7032318,
7032402-7032414,7032498-7032510,7032592-7032790
Length = 414
Score = 27.5 bits (58), Expect = 5.4
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2
Query: 239 AGHWTPNASYFFFGGDR*GVAGLP 168
AGHW P+++ ++ G+ GV G P
Sbjct: 224 AGHWFPHSAVYYDDGEIVGVHGRP 247
>04_04_0481 -
25541355-25541849,25541933-25542535,25542730-25542837,
25542925-25543260,25543391-25543461,25543692-25543824
Length = 581
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 291 IININSQLIIYRAFLSLCRTLDTECQLFLF 202
+ N S LI+ + FLSL + L T FLF
Sbjct: 495 VANWVSNLIVTQTFLSLTKALGTSATFFLF 524
>12_02_0629 -
21360831-21361310,21361391-21361663,21362212-21362488,
21362590-21362735,21363207-21363416
Length = 461
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 73 GMMSVDETLMCSFQILKPSEKKAKYQYNGINSGRPATP 186
G+ +VD ++ ++L +EK KYQY +G +TP
Sbjct: 319 GLEAVDRAIVQLARLLWEAEKSGKYQYFLCVTGDHSTP 356
>03_03_0246 + 15789635-15794227,15794314-15794555,15794630-15794771,
15796089-15796272,15796349-15796696,15796753-15797450,
15798208-15798900
Length = 2299
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 170 GGRPRLNGHHRKRNNWHSVSSVLHSERNA 256
GGR R G+ K +N S SSV HS +++
Sbjct: 1331 GGRGRKYGYAVKESNIRSTSSVDHSNKDS 1359
>03_02_0771 +
11041882-11042073,11042669-11042851,11042946-11043020,
11043089-11043283,11043380-11043478,11044189-11044352,
11045676-11045742,11045842-11045894,11046287-11046413,
11047439-11047627,11048201-11048287,11048411-11048565,
11048814-11048933,11049043-11049268,11049729-11049788,
11049877-11050050,11050138-11050247,11050417-11050582
Length = 813
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -1
Query: 366 NKKFKKGTSKLKHGYYY 316
NKK K+GT K KHG Y
Sbjct: 503 NKKEKRGTGKKKHGDLY 519
>03_01_0265 +
2046918-2049102,2052385-2052452,2052542-2052652,
2053164-2053250,2053476-2053684,2054115-2054340,
2054473-2054510,2054657-2054714,2055363-2055662,
2055832-2055903,2055988-2056112,2056240-2056312,
2056417-2056521
Length = 1218
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 102 VFLPDIKAV*EKGKVSVQRYQQWEAGHASTVTTEKEITGIRCPVSCTV 245
+F+ DI+ + GK +V E+ ++TVT ++ +TG++ S V
Sbjct: 763 LFIGDIQTQHKSGKTTVDVKIDSESRVSTTVTVDEALTGLKTSFSFRV 810
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,418,354
Number of Sequences: 37544
Number of extensions: 243974
Number of successful extensions: 569
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 568
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 895500300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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