Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_F08
(416 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00005A3B99 Cluster: PREDICTED: similar to epsilon su... 79 3e-14
UniRef50_O14579 Cluster: Coatomer subunit epsilon; n=42; Eumetaz... 76 3e-13
UniRef50_Q7Q558 Cluster: ENSANGP00000011535; n=1; Anopheles gamb... 68 9e-11
UniRef50_Q55FU2 Cluster: Putative uncharacterized protein; n=1; ... 60 2e-08
UniRef50_O64748 Cluster: Coatomer subunit epsilon-2; n=12; Magno... 60 2e-08
UniRef50_A5B6P3 Cluster: Putative uncharacterized protein; n=1; ... 50 1e-05
UniRef50_A6NKA3 Cluster: Uncharacterized protein COPE; n=10; Deu... 48 6e-05
UniRef50_O62246 Cluster: Probable coatomer subunit epsilon; n=2;... 46 3e-04
UniRef50_Q5DEQ9 Cluster: SJCHGC01641 protein; n=2; Schistosoma j... 45 7e-04
UniRef50_Q9Y0Y5 Cluster: CG9543-PA; n=3; Sophophora|Rep: CG9543-... 35 0.59
UniRef50_Q7S6M8 Cluster: Putative uncharacterized protein NCU048... 34 1.4
UniRef50_UPI0000D9E5C3 Cluster: PREDICTED: similar to USP6 N-ter... 33 1.8
UniRef50_A0HIL3 Cluster: Type I secretion outer membrane protein... 33 2.4
UniRef50_Q63WE0 Cluster: Putative type I restriction enzyme spec... 32 4.1
UniRef50_A6Q4U4 Cluster: Putative uncharacterized protein; n=1; ... 32 4.1
UniRef50_Q9KA97 Cluster: BH2393 protein; n=20; Bacillaceae|Rep: ... 32 5.5
UniRef50_Q92BW3 Cluster: Lin1429 protein; n=13; Listeria|Rep: Li... 32 5.5
UniRef50_Q02WI0 Cluster: Predicted Zn-dependent peptidase; n=4; ... 32 5.5
UniRef50_Q5DYB4 Cluster: Iron-regulated protein FrpC; n=1; Vibri... 31 7.2
UniRef50_Q5WBW0 Cluster: Acetyl-CoA acetyltransferase; n=1; Baci... 31 9.6
UniRef50_Q2AHK6 Cluster: Peptidase M16, C-terminal; n=1; Halothe... 31 9.6
UniRef50_A5JFL6 Cluster: MhaC; n=8; Moraxella catarrhalis|Rep: M... 31 9.6
>UniRef50_UPI00005A3B99 Cluster: PREDICTED: similar to epsilon
subunit of coatomer protein complex isoform a isoform 3;
n=2; Eutheria|Rep: PREDICTED: similar to epsilon subunit
of coatomer protein complex isoform a isoform 3 - Canis
familiaris
Length = 279
Score = 79.4 bits (187), Expect = 3e-14
Identities = 35/96 (36%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
Frame = +2
Query: 131 LNPSSPLVALQRDVFLYRSYIAQGNHRIVLQELKTAD-PILQPLKSLVDYLSPGANKPAI 307
+ PSSP ++RDVFLYR+Y+AQ + +VL E+K + P LQ ++ +YL+ + + +I
Sbjct: 41 VKPSSPERDVERDVFLYRAYLAQRKYGVVLDEIKPSSAPELQAVRMFAEYLANDSQRDSI 100
Query: 308 VADIDARVAKGTELSNEVFHVVAATIYYYEDNYEAA 415
V ++D +++ +++N F ++AA+IY+++ N +AA
Sbjct: 101 VVELDREMSRSVDVTNTTFLLMAASIYFHDQNPDAA 136
>UniRef50_O14579 Cluster: Coatomer subunit epsilon; n=42;
Eumetazoa|Rep: Coatomer subunit epsilon - Homo sapiens
(Human)
Length = 308
Score = 76.2 bits (179), Expect = 3e-13
Identities = 36/93 (38%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
Frame = +2
Query: 140 SSPLVALQRDVFLYRSYIAQGNHRIVLQELKTAD-PILQPLKSLVDYLSPGANKPAIVAD 316
SSP ++RDVFLYR+Y+AQ +VL E+K + P LQ ++ DYL+ + + +IVA+
Sbjct: 44 SSPERDVERDVFLYRAYLAQRKFGVVLDEIKPSSAPELQAVRMFADYLAHESRRDSIVAE 103
Query: 317 IDARVAKGTELSNEVFHVVAATIYYYEDNYEAA 415
+D +++ +++N F ++AA+IY ++ N +AA
Sbjct: 104 LDREMSRSVDVTNTTFLLMAASIYLHDQNPDAA 136
>UniRef50_Q7Q558 Cluster: ENSANGP00000011535; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000011535 - Anopheles gambiae
str. PEST
Length = 306
Score = 67.7 bits (158), Expect = 9e-11
Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Frame = +2
Query: 155 ALQRDVFLYRSYIAQGNHRIVLQELKTA-DPILQPLKSLVDYLSPGANKPAIVADIDARV 331
+L++D+F+YRSYIAQ +R+VL E+K + D L L+ L +Y+S A K AIV+ D +
Sbjct: 40 SLEKDIFMYRSYIAQHKYRVVLDEIKPSNDTPLLALRYLAEYMSNSARKEAIVSIFDEKF 99
Query: 332 AKGTELSNEVFHVVAATIYYYEDNYEAA 415
+ V+ +V A IY E+ YE A
Sbjct: 100 QGDINELHVVWIIVGAIIYCNEETYETA 127
>UniRef50_Q55FU2 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 300
Score = 60.1 bits (139), Expect = 2e-08
Identities = 36/91 (39%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Frame = +2
Query: 161 QRDVFLYRSYIAQGNHRIVLQELKT-----ADPILQPLKSLVDYLS-PGANKPAIVADID 322
+ D FLYR YIAQGN+ +VLQE K DP + L+ L YLS P N+ + I
Sbjct: 40 ESDYFLYRCYIAQGNYDLVLQETKNNRGSGEDPTIAGLQLLASYLSKPDENREGTLITIT 99
Query: 323 ARVAKGTELSNEVFHVVAATIYYYEDNYEAA 415
++ G N V+ ATIY+ E Y+ A
Sbjct: 100 QWISDGVVKFNYHLQVIIATIYFNEQLYDEA 130
>UniRef50_O64748 Cluster: Coatomer subunit epsilon-2; n=12;
Magnoliophyta|Rep: Coatomer subunit epsilon-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 293
Score = 59.7 bits (138), Expect = 2e-08
Identities = 30/89 (33%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Frame = +2
Query: 143 SPLVALQRDVFLYRSYIAQGNHRIVLQEL-KTADPILQPLKSLVDYLSPGANKPAIVADI 319
SP A++RD ++RSYIA G++++V+ E+ ++A LQ +K L YLS NK + ++ +
Sbjct: 36 SPENAVERDCLVFRSYIALGSYQLVISEIDESAATPLQAVKLLAMYLSTPQNKESTISSL 95
Query: 320 DARVAKGTELSNEVFHVVAATIYYYEDNY 406
+A T +N+ ++A I+ +E++Y
Sbjct: 96 KEWLADSTIGNNDTLRLIAGIIFMHEEDY 124
>UniRef50_A5B6P3 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 173
Score = 50.4 bits (115), Expect = 1e-05
Identities = 26/92 (28%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Frame = +2
Query: 143 SPLVALQRDVFLYRSYIAQGNHRIVLQEL-KTADPILQPLKSLVDYLSPGANKPAIVADI 319
SP +++RD ++RSYIA G++++V+ E+ +A LQ +K L LS NK + ++ +
Sbjct: 32 SPEDSIERDCLVHRSYIALGSYQLVINEIDSSAATPLQAVKLLALXLSSPENKESTISSL 91
Query: 320 DARVAKGTELSNEVFHVVAATIYYYEDNYEAA 415
+ +N + ++A ++ +E +Y A
Sbjct: 92 KELLGDPAIGNNPILRLIAGIVFMHEQDYNEA 123
>UniRef50_A6NKA3 Cluster: Uncharacterized protein COPE; n=10;
Deuterostomia|Rep: Uncharacterized protein COPE - Homo
sapiens (Human)
Length = 257
Score = 48.4 bits (110), Expect = 6e-05
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +2
Query: 140 SSPLVALQRDVFLYRSYIAQGNHRIVLQELK-TADPILQPLKSLVDYLSPGANKPAIVAD 316
SSP ++RDVFLYR+Y+AQ +VL E+K ++ P LQ ++ DYL+ + A+
Sbjct: 44 SSPERDVERDVFLYRAYLAQRKFGVVLDEIKPSSAPELQAVRMFADYLAHESRSTAMTVQ 103
Query: 317 I 319
I
Sbjct: 104 I 104
>UniRef50_O62246 Cluster: Probable coatomer subunit epsilon; n=2;
Caenorhabditis|Rep: Probable coatomer subunit epsilon -
Caenorhabditis elegans
Length = 292
Score = 46.0 bits (104), Expect = 3e-04
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Frame = +2
Query: 161 QRDVFLYRSYIAQGNHRIVLQEL--KTADPILQPLKSLVDYLSPGANKPAIVADIDARVA 334
++DV+LYRSYIAQG I L+E+ T L ++ ++ + A K I+A++ VA
Sbjct: 37 EKDVYLYRSYIAQGQAFIPLKEIPAATKSADLAAVRRYAEFRNNPAAKKKILAEVQEEVA 96
Query: 335 KGTELSNEVFHVVAATI 385
+ +E+ V+AATI
Sbjct: 97 -SRNIKSEIAAVLAATI 112
>UniRef50_Q5DEQ9 Cluster: SJCHGC01641 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC01641 protein - Schistosoma
japonicum (Blood fluke)
Length = 296
Score = 44.8 bits (101), Expect = 7e-04
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = +2
Query: 170 VFLYRSYIAQGNHRIVLQEL--KTADPILQPLKSLVDYLSPGANKPAIVADIDARVAKGT 343
V LY+ YIAQ + +VL E+ T P + L+ LV YLS ++ + + +++ + +
Sbjct: 40 VLLYKLYIAQKKYGVVLDEIPEDTIIPEFRLLRLLVKYLSKMESRQSTLEELELMFKQSS 99
Query: 344 ELSNEVFHVVAATIYYYEDNYEAA 415
E S + ++A TIY D EAA
Sbjct: 100 EFSQDAV-IIAVTIYLNMDMDEAA 122
>UniRef50_Q9Y0Y5 Cluster: CG9543-PA; n=3; Sophophora|Rep: CG9543-PA
- Drosophila melanogaster (Fruit fly)
Length = 306
Score = 35.1 bits (77), Expect = 0.59
Identities = 20/82 (24%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +2
Query: 173 FLYRSYIAQGNHRIVLQELKTADPI-LQPLKSLVDYLSPGANKPAIVADIDARVAKGTEL 349
++Y SY+A + RIV ++K + LQ L+ + + + ++ + +VA G E
Sbjct: 47 YMYLSYLAIDSGRIVASDIKEGNSTPLQALRLVHEAFEQPSRTEELLEKLTDKVA-GEED 105
Query: 350 SNEVFHVVAATIYYYEDNYEAA 415
++H+ A +Y ++ +E A
Sbjct: 106 ETNIWHLATAIVYCHDGQFENA 127
>UniRef50_Q7S6M8 Cluster: Putative uncharacterized protein
NCU04807.1; n=3; Sordariomycetes|Rep: Putative
uncharacterized protein NCU04807.1 - Neurospora crassa
Length = 744
Score = 33.9 bits (74), Expect = 1.4
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +2
Query: 215 VLQELKTADPILQPLKSLVDYLSPGANKPA-IVADIDARVAKGTELSN 355
VL KTA L P++S++D ++PG KP + DI A + T LSN
Sbjct: 81 VLPHAKTASSYLAPVRSMLD-IAPGPAKPVRSMLDIPAATSSRTPLSN 127
>UniRef50_UPI0000D9E5C3 Cluster: PREDICTED: similar to USP6
N-terminal like; n=1; Macaca mulatta|Rep: PREDICTED:
similar to USP6 N-terminal like - Macaca mulatta
Length = 450
Score = 33.5 bits (73), Expect = 1.8
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = -1
Query: 314 LLLWQVYLLQEINNLLGISEVEVSGQRSSTLARQYG----GYPERYTNGRGKHLV 162
L LW VYLL+ L+ I+ + QRS + Q+G G R T GR H V
Sbjct: 353 LRLWDVYLLEGEQVLMPITSIAFKVQRSKSPCAQWGLGSPGVRRRLTRGRLPHTV 407
>UniRef50_A0HIL3 Cluster: Type I secretion outer membrane protein,
TolC family precursor; n=1; Comamonas testosteroni
KF-1|Rep: Type I secretion outer membrane protein, TolC
family precursor - Comamonas testosteroni KF-1
Length = 460
Score = 33.1 bits (72), Expect = 2.4
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +2
Query: 194 AQGNHRIVLQELKTADPILQPLKSLVDYLSPG---ANKPAIVADIDARV 331
AQG + L ELK AD L P S+ S G A++PA D+D RV
Sbjct: 269 AQGQRALALAELKAADAQLMPTLSVDGSASRGLTAASRPAGYPDLDMRV 317
>UniRef50_Q63WE0 Cluster: Putative type I restriction enzyme
specificity protein; n=1; Burkholderia pseudomallei|Rep:
Putative type I restriction enzyme specificity protein -
Burkholderia pseudomallei (Pseudomonas pseudomallei)
Length = 429
Score = 32.3 bits (70), Expect = 4.1
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +2
Query: 131 LNPSSPLVALQRDVFLYRSYIAQG-NHRIVLQELKTADPILQ--PLKSLVDYLSPGANKP 301
LN + V + +V Y Y+ Q H +L LK+A P + + + L P +P
Sbjct: 315 LNTALYTVQMHDNVPKYLWYMLQSLKHIFILNSLKSAVPGVDRNDIHPAIVCLPPAEEQP 374
Query: 302 AIVADIDARVAK 337
AIVA +DA ++K
Sbjct: 375 AIVAFLDAEISK 386
>UniRef50_A6Q4U4 Cluster: Putative uncharacterized protein; n=1;
Nitratiruptor sp. SB155-2|Rep: Putative uncharacterized
protein - Nitratiruptor sp. (strain SB155-2)
Length = 421
Score = 32.3 bits (70), Expect = 4.1
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Frame = +2
Query: 74 KIALLCWKLPNKLLTRHNALNPSSPLVALQRDVFLYRSYIAQGNHRIVLQELKTADPILQ 253
KI WKLP K+ + + SS ++ + VF R +G +IV+ EL + Q
Sbjct: 126 KILYYLWKLPQKMSILEDVVQKSSHDLSKLQTVFEKRDEELRGFKQIVMDELNEIEGRFQ 185
Query: 254 PLKSLVDYLSPGANKPAIVADIDARVAK--GTELSNEVFHVVAATIYY 391
L + + +K + ++ ++ E NE F+ + YY
Sbjct: 186 NLDHAILQIDKELHKLTPIQNLPFFYSQTISFEKKNEDFYTMLEEHYY 233
>UniRef50_Q9KA97 Cluster: BH2393 protein; n=20; Bacillaceae|Rep:
BH2393 protein - Bacillus halodurans
Length = 431
Score = 31.9 bits (69), Expect = 5.5
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -3
Query: 147 GDEGFNALCLVNSLFGNFQHKRAIFLNNSEKVSIQQF 37
GD + A+ ++N LFG F H + +F+N EK S+ +
Sbjct: 276 GDPDYVAMQVMNGLFGGFSHSK-LFINVREKESLAYY 311
>UniRef50_Q92BW3 Cluster: Lin1429 protein; n=13; Listeria|Rep:
Lin1429 protein - Listeria innocua
Length = 430
Score = 31.9 bits (69), Expect = 5.5
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -3
Query: 147 GDEGFNALCLVNSLFGNFQHKRAIFLNNSEKVSIQQF 37
GD+ F AL L N L G F + + IF+N EK S+ +
Sbjct: 268 GDDDFVALQLANGLLGGFANSK-IFINVREKASLAYY 303
>UniRef50_Q02WI0 Cluster: Predicted Zn-dependent peptidase; n=4;
Lactococcus|Rep: Predicted Zn-dependent peptidase -
Lactococcus lactis subsp. cremoris (strain SK11)
Length = 428
Score = 31.9 bits (69), Expect = 5.5
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -3
Query: 147 GDEGFNALCLVNSLFGNFQHKRAIFLNNSEKVSI 46
GDE + AL ++N L G F H + +F N EK S+
Sbjct: 262 GDENYLALQVMNGLLGGFAHSK-LFTNVREKASL 294
>UniRef50_Q5DYB4 Cluster: Iron-regulated protein FrpC; n=1; Vibrio
fischeri ES114|Rep: Iron-regulated protein FrpC - Vibrio
fischeri (strain ATCC 700601 / ES114)
Length = 3933
Score = 31.5 bits (68), Expect = 7.2
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +2
Query: 191 IAQGNHRIVLQELKTADPIL--QPLKSLVDYLSPGANKPAIVADIDARVAKGTELSNEVF 364
+ +G++ IV++E TA + L ++D +P N P I D+D+ ++ G L+N+
Sbjct: 1831 VVEGDNSIVVRETDTAGNVSGSSTLDFVLDTQAP--NAPTITLDVDSGISNGDLLTNDGS 1888
Query: 365 HVVAATIYYYEDNYEAA 415
V + Y+AA
Sbjct: 1889 FTVTPSEVGNTVEYQAA 1905
>UniRef50_Q5WBW0 Cluster: Acetyl-CoA acetyltransferase; n=1;
Bacillus clausii KSM-K16|Rep: Acetyl-CoA
acetyltransferase - Bacillus clausii (strain KSM-K16)
Length = 378
Score = 31.1 bits (67), Expect = 9.6
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Frame = +2
Query: 104 NKLLTRHNALNPSSPLVALQRDVFLYRSYIAQGNHRIVLQELKTADPILQPLKSL-VDYL 280
N+ + + A +VAL+ ++ + IAQ I L+++ TA P+ PL+ L +
Sbjct: 150 NRYIHEYGAQRKHLAMVALKNRMYAQANPIAQFQKAISLEDVLTARPVTDPLRLLDCSPI 209
Query: 281 SPGANKPAI------VADIDARVAKGTELSNEV 361
S GA + V + + A GT L EV
Sbjct: 210 SDGAAAVVLQKSESGVRVLSSGQASGTPLMQEV 242
>UniRef50_Q2AHK6 Cluster: Peptidase M16, C-terminal; n=1;
Halothermothrix orenii H 168|Rep: Peptidase M16,
C-terminal - Halothermothrix orenii H 168
Length = 427
Score = 31.1 bits (67), Expect = 9.6
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -3
Query: 147 GDEGFNALCLVNSLFGNFQHKRAIFLNNSEKVSIQQF 37
GD+ +NAL N + G F H + +F N EK S+ +
Sbjct: 273 GDKLYNALLFYNGILGRFPHSK-LFQNVREKASLAYY 308
>UniRef50_A5JFL6 Cluster: MhaC; n=8; Moraxella catarrhalis|Rep: MhaC
- Moraxella catarrhalis
Length = 705
Score = 31.1 bits (67), Expect = 9.6
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +2
Query: 254 PLKSLVDYLSPGANKPAIVADIDARVAKGTELSNEVFHVVAATI---YYYEDNYE 409
PL++L + S AN + A ID A G N H++A + YY++ + +
Sbjct: 594 PLQNLNQHFSTNANSAQLYASIDQGYAYGKNTLNNQRHILAGAVGMRYYFQGSQD 648
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 414,746,214
Number of Sequences: 1657284
Number of extensions: 8040717
Number of successful extensions: 20976
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 20582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20971
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 19465676618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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