Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_F08
         (416 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    25   0.83 
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   1.9  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   1.9  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   3.4  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   3.4  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   4.5  
AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.       23   4.5  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   5.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   5.9  

>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 25.4 bits (53), Expect = 0.83
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = -1

Query: 284 EINNLLGISEVEVSGQRSSTLARQYGGYPERYTNGRGKHLVEELPREMKDL 132
           E    L   E+EVS   +  L   +  + E + + R K   EEL   ++ L
Sbjct: 98  EFEEFLNAVEIEVSAHPNVVLGGDFNAWHEAWGSARTKRKGEELLNTVEQL 148


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +1

Query: 247  TSTSEIPSRLFISWSK*TCHSSRH 318
            T+  EI SRLF+S SK T  +++H
Sbjct: 1066 TNGEEIVSRLFVSKSKVTPLATKH 1089


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 200  PERYTNGRGKHLVEELPREMKDLMR 126
            P+R  NGR     EEL R  +++ R
Sbjct: 1174 PDRQQNGRAVSSAEELERRRREMER 1198


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 351 DNSVPFATLASMSATMA 301
           DNSVPF+T   M  ++A
Sbjct: 333 DNSVPFSTFCRMGKSIA 349


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -1

Query: 284 EINNLLGISEVEVSGQRSSTLARQYGGYPERYTNGR-GKHLVEEL 153
           E   LLG  E+E +      +A  +  + E + +GR G+  +E L
Sbjct: 163 EFERLLGAIELEAASHSRVVVAGDFNAWHEEWGSGRNGQRGIELL 207


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 33   PRIVELKLFRNCLEKLPFYVGNY 101
            P I   +   + +E +PF+V NY
Sbjct: 1881 PPIYHYRAHTSTMENVPFFVANY 1903


>AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.
          Length = 458

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 12/45 (26%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = +2

Query: 182 RSYIAQGNHRIVLQELKTADPILQPLKSLVD---YLSPGANKPAI 307
           R  +   N+R  +Q   T+DP L  +  L+    +++P    PA+
Sbjct: 388 RKVVCVDNYRPSVQNRWTSDPFLASMSKLMRECWHMNPNVRLPAL 432


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 6/13 (46%), Positives = 12/13 (92%)
 Frame = -1

Query: 68  TIPKKFQFNNSWL 30
           T+P+ ++FN++WL
Sbjct: 175 TLPESWKFNSTWL 187



 Score = 22.2 bits (45), Expect = 7.8
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 329  VAKGTELSNEVFHVVAATIYYYEDN 403
            + +G E  N    VV AT++ Y D+
Sbjct: 2547 IYEGKESENNAPSVVRATVFVYADD 2571


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 6/13 (46%), Positives = 12/13 (92%)
 Frame = -1

Query: 68  TIPKKFQFNNSWL 30
           T+P+ ++FN++WL
Sbjct: 175 TLPESWKFNSTWL 187


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 440,095
Number of Sequences: 2352
Number of extensions: 8148
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34205040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)