Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_F08
(416 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 24 0.60
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 23 1.8
AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor p... 22 2.4
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 22 2.4
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 3.2
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 21 4.2
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 21 4.2
AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin prot... 21 4.2
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 21 4.2
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 21 5.6
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 21 5.6
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 20 9.7
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 24.2 bits (50), Expect = 0.60
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 245 ILQPLKSLVDYLSPGANKPAIVADIDARVAKGT 343
IL+ LVD PG + V D++A +A T
Sbjct: 113 ILEKKPELVDATDPGEHNGDTVTDVEAGLASRT 145
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 22.6 bits (46), Expect = 1.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 263 ISEVEVSGQRSSTLARQYGGYPERY 189
I EV RSS LA + GYP Y
Sbjct: 123 IIEVNARLSRSSALASKATGYPLAY 147
>AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor
protein.
Length = 139
Score = 22.2 bits (45), Expect = 2.4
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -2
Query: 337 FCNPSINVCYYGRF 296
+CN +IN C Y F
Sbjct: 52 YCNSAINPCIYALF 65
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 22.2 bits (45), Expect = 2.4
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -2
Query: 337 FCNPSINVCYYGRF 296
+CN +IN C Y F
Sbjct: 500 YCNSAINPCIYALF 513
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.8 bits (44), Expect = 3.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 266 LVDYLSPGANKPAIVADIDARVAKGT 343
LVD PG + V D++A +A T
Sbjct: 125 LVDATDPGEHNGDTVTDVEAGLASRT 150
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 21.4 bits (43), Expect = 4.2
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -3
Query: 144 DEGFNALCLVNSLFGNFQHKRAIFL 70
D+ N S+ G F+H IFL
Sbjct: 675 DKARNDFLTEASIMGQFEHPNVIFL 699
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 21.4 bits (43), Expect = 4.2
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = -1
Query: 287 QEINNLLGISEVEVSGQRSSTLARQYGGYPERYTNGRGKHLVEELPREMK 138
++IN + + G+++S Y P + RGK +EE+ E+K
Sbjct: 82 EDINKRAPMGFQGMRGKKASFDDEYYKRAPMGFQGMRGKKSLEEILDEIK 131
>AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin
protein.
Length = 215
Score = 21.4 bits (43), Expect = 4.2
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = -1
Query: 287 QEINNLLGISEVEVSGQRSSTLARQYGGYPERYTNGRGKHLVEELPREMK 138
++IN + + G+++S Y P + RGK +EE+ E+K
Sbjct: 82 EDINKRAPMGFQGMRGKKASFDDEYYKRAPMGFQGMRGKKSLEEILDEIK 131
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 21.4 bits (43), Expect = 4.2
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = -1
Query: 287 QEINNLLGISEVEVSGQRSSTLARQYGGYPERYTNGRGKHLVEELPREMK 138
++IN + + G+++S Y P + RGK +EE+ E+K
Sbjct: 82 EDINKRAPMGFQGMRGKKASFDDEYYKRAPMGFQGMRGKKSLEEILDEIK 131
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.0 bits (42), Expect = 5.6
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -1
Query: 248 VSGQRSSTLARQYGGYPERYTNGRGK 171
+ G T + + G+PER RGK
Sbjct: 587 IGGSEPFTYSEKMLGFPERLILPRGK 612
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.0 bits (42), Expect = 5.6
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -1
Query: 248 VSGQRSSTLARQYGGYPERYTNGRGK 171
+ G T + + G+PER RGK
Sbjct: 587 IGGSEPFTYSEKMLGFPERLILPRGK 612
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 20.2 bits (40), Expect = 9.7
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +2
Query: 2 LQEFRHEGQPTKNC 43
++EFRH G+ + C
Sbjct: 1 MEEFRHNGRDFEYC 14
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,977
Number of Sequences: 438
Number of extensions: 2978
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10626762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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