Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_F07
(502 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 175 2e-45
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 174 5e-45
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 146 2e-36
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 121 7e-29
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 81 7e-17
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 77 1e-15
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 59 4e-10
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 57 1e-09
SPAC926.08c |||Brix doamin protein Rpf2 |Schizosaccharomyces pom... 26 2.8
SPAC3C7.01c ||SPAC732.03c|inositol polyphosphate phosphatase |Sc... 25 4.8
SPBC36B7.08c |||nucleosome assembly protein |Schizosaccharomyces... 25 6.4
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 25 6.4
SPBC27B12.11c |||transcription factor |Schizosaccharomyces pombe... 25 8.4
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 175 bits (427), Expect = 2e-45
Identities = 85/123 (69%), Positives = 98/123 (79%)
Frame = +1
Query: 1 STHASIEIDSLFDGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDNAQIHDIVL 180
S ASIEIDSLF+GIDFYTSITRARFEEL ADLFR TMEPVE+ LRD+K+D A +++IVL
Sbjct: 275 SAQASIEIDSLFEGIDFYTSITRARFEELCADLFRKTMEPVERVLRDSKVDKASVNEIVL 334
Query: 181 VGGSTRIPKVQKLLQDFFNGKELNKSINPDDXXXXXXXXXXXILHGDKSEEVQDLLLLDV 360
VGGSTRIP+VQKL+ DFFNGKE KSINPD+ +L GD SE+ QDLLLLDV
Sbjct: 335 VGGSTRIPRVQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAVLTGDTSEKTQDLLLLDV 394
Query: 361 TPV 369
P+
Sbjct: 395 APL 397
Score = 49.2 bits (112), Expect = 3e-07
Identities = 25/40 (62%), Positives = 25/40 (62%)
Frame = +3
Query: 381 IETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQXGVLIQV 500
IETAGGVMT LIKRN YSDNQ GVLIQV
Sbjct: 401 IETAGGVMTPLIKRNTTIPTKKSEIFSTYSDNQPGVLIQV 440
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 174 bits (424), Expect = 5e-45
Identities = 84/123 (68%), Positives = 99/123 (80%)
Frame = +1
Query: 1 STHASIEIDSLFDGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDNAQIHDIVL 180
S ASIEIDSL++GIDFYTSITRARFEEL ADLFR+TMEPVEK LRD+K+D + +++IVL
Sbjct: 275 SAQASIEIDSLYEGIDFYTSITRARFEELCADLFRNTMEPVEKVLRDSKIDKSSVNEIVL 334
Query: 181 VGGSTRIPKVQKLLQDFFNGKELNKSINPDDXXXXXXXXXXXILHGDKSEEVQDLLLLDV 360
VGGSTRIP++QKL+ DFFNGKE KSINPD+ IL GD SE+ QDLLLLDV
Sbjct: 335 VGGSTRIPRIQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAILVGDTSEKTQDLLLLDV 394
Query: 361 TPV 369
P+
Sbjct: 395 APL 397
Score = 48.0 bits (109), Expect = 8e-07
Identities = 24/40 (60%), Positives = 25/40 (62%)
Frame = +3
Query: 381 IETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQXGVLIQV 500
IETAGGVMT LIKRN Y+DNQ GVLIQV
Sbjct: 401 IETAGGVMTPLIKRNTTIPTKKSEVFSTYADNQPGVLIQV 440
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 146 bits (353), Expect = 2e-36
Identities = 68/123 (55%), Positives = 93/123 (75%), Gaps = 1/123 (0%)
Frame = +1
Query: 4 THASIEIDSLFDGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDNAQIHDIVLV 183
T ++E+DSL +GIDF +SITRARFE++NA F++T++PV K L+D+K+ A +HDIVLV
Sbjct: 280 TQTTVEVDSLSNGIDFSSSITRARFEDINATTFKATIDPVAKVLKDSKVPKADVHDIVLV 339
Query: 184 GGSTRIPKVQKLLQDFFNGKELNKSINPDDXXXXXXXXXXXIL-HGDKSEEVQDLLLLDV 360
GGSTRIPKVQ+L+ DFF+G+ LNKSINPD+ +L + S++ QDLLLLDV
Sbjct: 340 GGSTRIPKVQRLVSDFFDGRALNKSINPDEAVAYGAAVQAAVLTNKADSDKTQDLLLLDV 399
Query: 361 TPV 369
P+
Sbjct: 400 VPL 402
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 121 bits (291), Expect = 7e-29
Identities = 57/118 (48%), Positives = 86/118 (72%)
Frame = +1
Query: 16 IEIDSLFDGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDNAQIHDIVLVGGST 195
IEI+S F+G DF +++RA+FEE+N DLF+ T++PVE+ L+D+ + ++I DIVLVGGST
Sbjct: 312 IEIESFFNGQDFSETLSRAKFEEINMDLFKKTLKPVEQVLKDSNLKKSEIDDIVLVGGST 371
Query: 196 RIPKVQKLLQDFFNGKELNKSINPDDXXXXXXXXXXXILHGDKSEEVQDLLLLDVTPV 369
RIPKVQ+LL+ FF GK+ +K INPD+ +L G++ + +++LLDV P+
Sbjct: 372 RIPKVQELLESFF-GKKASKGINPDEAVAYGAAVQAGVLSGEEGSD--NIVLLDVIPL 426
Score = 35.1 bits (77), Expect = 0.006
Identities = 20/40 (50%), Positives = 20/40 (50%)
Frame = +3
Query: 381 IETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQXGVLIQV 500
IET GGVMT LI RN DNQ VLIQV
Sbjct: 430 IETTGGVMTKLIGRNTPIPTRKSQIFSTAVDNQNTVLIQV 469
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 81.4 bits (192), Expect = 7e-17
Identities = 40/103 (38%), Positives = 68/103 (66%)
Frame = +1
Query: 61 ITRARFEELNADLFRSTMEPVEKSLRDAKMDNAQIHDIVLVGGSTRIPKVQKLLQDFFNG 240
I+RA+FE+L L R T++P +++L+DA + ++I++++LVGG TR+P+V + ++ F
Sbjct: 343 ISRAQFEKLVDPLVRRTIDPCKRALKDANLQTSEINEVILVGGMTRMPRVVETVKSIFK- 401
Query: 241 KELNKSINPDDXXXXXXXXXXXILHGDKSEEVQDLLLLDVTPV 369
+E KS+NPD+ +L G V+DL+LLDVTP+
Sbjct: 402 REPAKSVNPDEAVAIGAAIQGGVLSG----HVKDLVLLDVTPL 440
Score = 29.9 bits (64), Expect = 0.22
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +3
Query: 381 IETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQXGVLIQV 500
IET GGV T LI RN +D Q V I+V
Sbjct: 444 IETLGGVFTRLINRNTTIPTRKSQVFSTAADGQTAVEIRV 483
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 77.0 bits (181), Expect = 1e-15
Identities = 39/120 (32%), Positives = 69/120 (57%)
Frame = +1
Query: 1 STHASIEIDSLFDGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDNAQIHDIVL 180
++ A I+ L DGIDF ITR+ E L D+ + +EP+ K+L+ A + ++I+ I+L
Sbjct: 311 NSEAIASIEELADGIDFRLKITRSVLESLCKDMEDAAVEPINKALKKANLTFSEINSIIL 370
Query: 181 VGGSTRIPKVQKLLQDFFNGKELNKSINPDDXXXXXXXXXXXILHGDKSEEVQDLLLLDV 360
GG++RIP +Q L D+ + +++K++N D+ L KS V+ L++ D+
Sbjct: 371 FGGASRIPFIQSTLADYVSSDKISKNVNADEASVKGAAFYGASL--TKSFRVKPLIVQDI 428
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 58.8 bits (136), Expect = 4e-10
Identities = 29/91 (31%), Positives = 55/91 (60%)
Frame = +1
Query: 1 STHASIEIDSLFDGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDNAQIHDIVL 180
+ +A + ++ + + ID + I R+ FEEL L P+EK+L A + ++ I +
Sbjct: 283 NANAPLNVEMIMNDIDASSFIKRSDFEELIKPLLERLTPPIEKALELAGIKKEDLYSIEM 342
Query: 181 VGGSTRIPKVQKLLQDFFNGKELNKSINPDD 273
VGG TR+P V++++ ++F GK L+ ++N D+
Sbjct: 343 VGGCTRVPIVKEVIANYF-GKGLSFTLNQDE 372
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 57.2 bits (132), Expect = 1e-09
Identities = 27/85 (31%), Positives = 49/85 (57%)
Frame = +1
Query: 4 THASIEIDSLFDGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDNAQIHDIVLV 183
T AS +DSL DGIDF++SI R R++ + + V +++ A M+ I +++L
Sbjct: 302 TTASAAVDSLADGIDFHSSINRLRYDLAASATLNRMADLVTEAVEKANMEPFDISEVILA 361
Query: 184 GGSTRIPKVQKLLQDFFNGKELNKS 258
GG++ PK+ L++ F + + +S
Sbjct: 362 GGASNTPKLTSLMESIFPEQTIIRS 386
>SPAC926.08c |||Brix doamin protein Rpf2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 26.2 bits (55), Expect = 2.8
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -2
Query: 87 QLLKTSTSDRRVEVDTIEE*IDFNAR 10
+LLKT T+ RVE++ + IDFN R
Sbjct: 207 KLLKTKTNLPRVELEEMGPRIDFNIR 232
>SPAC3C7.01c ||SPAC732.03c|inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 611
Score = 25.4 bits (53), Expect = 4.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 154 NAQIHDIVLVGGSTRIPKVQKLLQDF 231
N Q+HDI ++ S + + LQDF
Sbjct: 407 NMQLHDIGVLSSSESLEEYDSFLQDF 432
>SPBC36B7.08c |||nucleosome assembly protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 25.0 bits (52), Expect = 6.4
Identities = 9/29 (31%), Positives = 12/29 (41%)
Frame = +2
Query: 104 DLQWSPSKSPSAMRRWTMPRFTTSYSWAG 190
D+ W P KS + P F + W G
Sbjct: 141 DIHWKPGKSLFRKNKKLPPNFFDYFQWTG 169
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 25.0 bits (52), Expect = 6.4
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -2
Query: 183 HEYDVVNLGIVHLRIAEGLFDGLHCRSEQISVQLLKTSTSD 61
HEY+V+ + E LF G++ R E + ++L + D
Sbjct: 931 HEYNVIKGLLEEYYNVEKLFSGINKREEDVILRLRDENKDD 971
>SPBC27B12.11c |||transcription factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 738
Score = 24.6 bits (51), Expect = 8.4
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +3
Query: 144 EDGQCPDSRHRTRGRVHSHS*SAEAPARFLQR 239
E+ PD + RGR+HS S + ++ ++R
Sbjct: 622 EEEDVPDHQPSWRGRIHSFSIATDSSQHVVER 653
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,718,309
Number of Sequences: 5004
Number of extensions: 28663
Number of successful extensions: 88
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 85
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 198176188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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