Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_F06
(662 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0176 - 41733845-41734834,41736058-41736588 33 0.20
08_01_0799 + 7734031-7735102,7735453-7735475 33 0.27
07_03_1529 + 27491963-27492465,27493045-27493154,27493384-274935... 32 0.47
08_01_0794 - 7687480-7687798,7687817-7688523 31 0.82
04_03_0991 - 21500143-21500799,21500834-21501172 31 0.82
08_02_1308 - 26024491-26025405 31 1.1
04_03_0990 - 21481459-21481933,21482140-21482771 31 1.1
11_01_0366 + 2793732-2793838,2793944-2794979 30 1.4
07_01_0484 - 3643294-3643478,3644282-3644555,3644646-3645018,364... 30 1.4
06_03_0049 + 15961706-15962017,15962952-15963851,15964769-159649... 30 1.4
10_08_0051 + 14489255-14490403 30 1.9
10_08_0052 - 14491990-14493108 29 2.5
06_01_0844 - 6411121-6411129,6411671-6411796,6411980-6412043,641... 29 2.5
10_08_0053 - 14496494-14497240,14497418-14497501,14497676-14498152 29 3.3
08_01_0657 + 5674907-5674993,5675615-5676583 29 3.3
04_04_1221 + 31845938-31847038 29 3.3
08_02_0028 - 11371547-11371657,11372326-11372518,11372738-113728... 29 4.4
06_03_0004 + 15296139-15296433,15297045-15297406 29 4.4
12_01_0252 + 1868670-1869200,1870167-1871120 28 5.8
11_01_0252 + 1934505-1935032,1936001-1936957 28 5.8
05_06_0259 + 26733699-26733854,26733940-26734071,26734171-267343... 28 5.8
05_03_0631 - 16402182-16402474,16403195-16403468 28 5.8
02_02_0713 + 13209130-13209691,13209731-13209850,13209896-132103... 28 5.8
11_01_0588 - 4679813-4680970 28 7.6
11_01_0579 + 4616191-4617348 28 7.6
10_04_0015 + 7586705-7587218,7587294-7588063,7588243-7588278,758... 28 7.6
06_03_0323 - 19579118-19579489 28 7.6
04_01_0409 - 5409018-5410268 28 7.6
>01_07_0176 - 41733845-41734834,41736058-41736588
Length = 506
Score = 33.1 bits (72), Expect = 0.20
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +1
Query: 205 NMSAGFHGLLSRGDLV-DVTLAAEGRLLQAHKLVLSRMFTLFSRNVQNEPNSXSAFPXXV 381
++S + LL G DVT + EGRL+ AH+ +L+ F + +A P
Sbjct: 7 SLSMDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGAAADQAAAPPGA 66
Query: 382 FLTSMLTP 405
L L+P
Sbjct: 67 LLLDHLSP 74
>08_01_0799 + 7734031-7735102,7735453-7735475
Length = 364
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +1
Query: 202 ANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSRMFTLFSRNVQNE 348
+++S F LL +G+ DVT G + AHK++L+ ++F + +
Sbjct: 175 SDLSENFGELLEKGEGSDVTFVVGGEKIAAHKIILAARSSVFKAELYGQ 223
>07_03_1529 +
27491963-27492465,27493045-27493154,27493384-27493510,
27494082-27494430,27494975-27495251,27496236-27496333,
27498090-27498214,27498270-27498326,27498328-27498370,
27498581-27498667,27498802-27498882,27499735-27499901,
27499987-27500098,27500188-27500390,27500473-27500607,
27501106-27501205
Length = 857
Score = 31.9 bits (69), Expect = 0.47
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 202 ANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSRMFTLF 327
+NMS LL+ G D+T +G + AHK+VL+ +F
Sbjct: 295 SNMSQHIGQLLTDGKRTDITFEVDGEVFPAHKVVLAARSPVF 336
>08_01_0794 - 7687480-7687798,7687817-7688523
Length = 341
Score = 31.1 bits (67), Expect = 0.82
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 220 FHGLLSRGDLVDVTLAAEGRLLQAHKLVLSRMFTLFSRNVQNE 348
F LL +G+ DVT G + AHK+VL+ ++F + +
Sbjct: 180 FGELLEKGEGADVTFVVGGEKIAAHKIVLAARSSVFKAELYGQ 222
>04_03_0991 - 21500143-21500799,21500834-21501172
Length = 331
Score = 31.1 bits (67), Expect = 0.82
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 226 GLLSRGDLVDVTLAAEGRLLQAHKLVLSRMFTLF 327
GLL+ G+ DVT G+ AH+LVL+ +F
Sbjct: 168 GLLATGEGADVTFEVSGKTFAAHRLVLAARSPVF 201
>08_02_1308 - 26024491-26025405
Length = 304
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 202 ANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSRMFTLF 327
+++ A GLL RG+ DV+ +G AH+ VL+ +F
Sbjct: 112 SDIGAHLGGLLDRGEGTDVSFLVDGETFPAHRAVLAARSPVF 153
>04_03_0990 - 21481459-21481933,21482140-21482771
Length = 368
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 226 GLLSRGDLVDVTLAAEGRLLQAHKLVLSRMFTLF 327
GLL+ G+ DVT EG+ AH+ VL+ +F
Sbjct: 188 GLLATGEGADVTFEVEGKTFAAHRWVLAARSPVF 221
>11_01_0366 + 2793732-2793838,2793944-2794979
Length = 380
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 217 GFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSRMFTL 324
G + + GD+ DV A +G L Q H +V+SR L
Sbjct: 262 GLRNVFAIGDITDVPEAKQGYLAQRHAMVVSRNLRL 297
>07_01_0484 -
3643294-3643478,3644282-3644555,3644646-3645018,
3645177-3645233,3646034-3646458
Length = 437
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +1
Query: 220 FHGLLSRGDLVDVTLAAEGRLLQAHKLVLSRMFTLF 327
F LL + VDV L+ G AHKLVL+ T+F
Sbjct: 215 FGTLLDNHEGVDVVLSVGGERFHAHKLVLAARSTVF 250
>06_03_0049 +
15961706-15962017,15962952-15963851,15964769-15964913,
15964969-15965705
Length = 697
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 101 YWNYRVPKLRIGFPQSPPSWRRTNNSHYVGTISTRI 208
+W P G PQSP WR +++ +G I+ R+
Sbjct: 616 HWGNNQPSRSSGVPQSPNEWRSSSSRWDLGEITRRM 651
>10_08_0051 + 14489255-14490403
Length = 382
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +1
Query: 226 GLLSRGDLVDVTLAAEGRLLQAHKLVLSRMFTLFSRNVQNEPNSXSAFPXXVFLTSM 396
GLL GD DVT G ++AH+ +L+ +F + + S+ V + M
Sbjct: 192 GLLESGDGADVTFHVAGEEVRAHRYILAARSPVFKAELFGQMKESSSSNTVVNVDDM 248
>10_08_0052 - 14491990-14493108
Length = 372
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 226 GLLSRGDLVDVTLAAEGRLLQAHKLVLSRMFTLFSRNVQNEPNSXSA 366
GLL GD DVT G ++AH+ +L+ +F + + S+
Sbjct: 188 GLLESGDGADVTFRVAGEDVRAHRYILAARSPVFKAELFGQMKESSS 234
>06_01_0844 -
6411121-6411129,6411671-6411796,6411980-6412043,
6412568-6412695,6412855-6412971,6414936-6415475,
6415554-6417344,6418359-6421407,6421765-6421823,
6422738-6422791
Length = 1978
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = -1
Query: 179 ENCSSDAMMAATVGTLS*ALVLY 111
E+CSS A +A TVG L+ AL++Y
Sbjct: 363 ESCSSPAQIADTVGALASALMIY 385
>10_08_0053 - 14496494-14497240,14497418-14497501,14497676-14498152
Length = 435
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +1
Query: 226 GLLSRGDLVDVTLAAEGRLLQAHKLVLSRMFTLFSRNVQNEPNSXSAFPXXVFLTSM 396
GLL GD DVT G + AH+ +L+ +F + + S+ V + M
Sbjct: 252 GLLESGDGADVTFHVAGEEVPAHRYILAARSPVFKAELFGQMKESSSSNTIVKVDDM 308
>08_01_0657 + 5674907-5674993,5675615-5676583
Length = 351
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +1
Query: 229 LLSRGDLVDVTLAAEGRLLQAHKLVLSRMFTLFSRNVQNEPNSXSA 366
LL RG DVTL G+ AH+ +L+ +F ++ + S+
Sbjct: 178 LLRRGTGADVTLVVSGKCFPAHRAILASRSPVFMASLFGDMKEKSS 223
>04_04_1221 + 31845938-31847038
Length = 366
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 202 ANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLS 309
+N+ F +L G+ DVT G+ +AHK VL+
Sbjct: 178 SNLHTDFENMLQDGEGSDVTFTVGGQEFRAHKCVLA 213
>08_02_0028 -
11371547-11371657,11372326-11372518,11372738-11372814,
11373498-11373608,11374533-11374659,11374745-11375022
Length = 298
Score = 28.7 bits (61), Expect = 4.4
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -2
Query: 64 PNGHTFIPRPPRLSLVPNSC 5
PNG +++P PPR+S+ + C
Sbjct: 226 PNGRSWLPSPPRISISSSFC 245
>06_03_0004 + 15296139-15296433,15297045-15297406
Length = 218
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 101 YWNYRVPKLRIGFPQSPPSWRRTNNSHYVGTISTRI 208
+W P+ G P SP WR +++ +G I+ R+
Sbjct: 166 HWGDNQPRRSSGVPPSPSEWRSSSSRWDLGEIARRM 201
>12_01_0252 + 1868670-1869200,1870167-1871120
Length = 494
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 205 NMSAGFHGLLSRGDLV-DVTLAAEGRLLQAHKLVLSRMFTLFSR 333
++S + LL G DV + EGRL+ AH+ VL+ F +
Sbjct: 9 SLSLDYLNLLINGQAFSDVAFSVEGRLVHAHRCVLAARSLFFRK 52
>11_01_0252 + 1934505-1935032,1936001-1936957
Length = 494
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 205 NMSAGFHGLLSRGDLV-DVTLAAEGRLLQAHKLVLSRMFTLFSR 333
++S + LL G DV + EGRL+ AH+ VL+ F +
Sbjct: 9 SLSLDYLSLLINGQAFSDVAFSVEGRLVHAHRCVLAARSLFFRK 52
>05_06_0259 +
26733699-26733854,26733940-26734071,26734171-26734341,
26734419-26734445,26734550-26734757,26735160-26735241,
26735384-26735492,26735640-26735756,26735828-26736160
Length = 444
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 660 EGLVSKSVSNLVITDCLCCDDLGPGLDVGFGLDGVELSSF 541
EG+V K+VSN +I D CD P + ++L +F
Sbjct: 307 EGIVMKNVSNPIIIDQYYCDQPTPCANQSTSSSSLKLGNF 346
>05_03_0631 - 16402182-16402474,16403195-16403468
Length = 188
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 101 YWNYRVPKLRIGFPQSPPSWRRTNNSHYVGTISTRI 208
+W P G P SP WR +++ +G I+ RI
Sbjct: 130 HWGDYQPSRSSGVPPSPSEWRSSSSRWDLGEITRRI 165
>02_02_0713 +
13209130-13209691,13209731-13209850,13209896-13210314,
13210485-13210750,13211381-13211620,13212084-13212876
Length = 799
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 101 YWNYRVPKLRIGFPQSPPSWRRTNNSHYVGTISTRI 208
+W P G P SP WR +++ +G I+ R+
Sbjct: 703 HWGDDQPSRSSGMPPSPSEWRSSSSRRDLGEITRRM 738
>11_01_0588 - 4679813-4680970
Length = 385
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 101 YWNYRVPKLRIGFPQSPPSWRRTNNSHYVGTISTRI 208
+W P G P SP WR +++ +G I+ R+
Sbjct: 320 HWGDNQPSRSSGVPPSPSEWRSSSSRWDLGEITKRM 355
>11_01_0579 + 4616191-4617348
Length = 385
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 101 YWNYRVPKLRIGFPQSPPSWRRTNNSHYVGTISTRI 208
+W P G P SP WR +++ +G I+ R+
Sbjct: 320 HWGDNQPSRSSGVPPSPSEWRSSSSRWDLGEITKRM 355
>10_04_0015 +
7586705-7587218,7587294-7588063,7588243-7588278,
7588591-7588662
Length = 463
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 101 YWNYRVPKLRIGFPQSPPSWRRTNNSHYVGTISTRI 208
+W P G P SP WR +++ +G I+ R+
Sbjct: 317 HWGDNQPSKSSGVPPSPSEWRSSSSRWDLGEITRRM 352
>06_03_0323 - 19579118-19579489
Length = 123
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 101 YWNYRVPKLRIGFPQSPPSWRRTNNSHYVGTISTRI 208
+W P G P SP WR +++ +G I+ R+
Sbjct: 27 HWRDNQPSRSSGVPPSPSEWRSSSSRWDLGEITRRM 62
>04_01_0409 - 5409018-5410268
Length = 416
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 101 YWNYRVPKLRIGFPQSPPSWRRTNNSHYVGTISTRI 208
+W P G P SP WR +++ +G I+ R+
Sbjct: 320 HWGDNQPSRSSGVPPSPSEWRSSSSRWDLGEITRRM 355
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,894,614
Number of Sequences: 37544
Number of extensions: 339572
Number of successful extensions: 878
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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