Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_F06
         (662 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC109059-1|AAI09060.1|  604|Homo sapiens kelch-like 15 (Drosophi...    39   0.018
BC109058-1|AAI09059.1|  604|Homo sapiens kelch-like 15 (Drosophi...    39   0.018
AK057298-1|BAB71415.1|  604|Homo sapiens protein ( Homo sapiens ...    39   0.018
BX640727-1|CAE45843.1|  620|Homo sapiens hypothetical protein pr...    33   0.69 
BX538173-1|CAD98048.1|  620|Homo sapiens hypothetical protein pr...    33   0.69 
BC041384-1|AAH41384.1|  620|Homo sapiens kelch-like 8 (Drosophil...    33   0.69 
AB037799-1|BAA92616.2|  628|Homo sapiens KIAA1378 protein protein.     33   0.69 

>BC109059-1|AAI09060.1|  604|Homo sapiens kelch-like 15 (Drosophila)
           protein.
          Length = 604

 Score = 38.7 bits (86), Expect = 0.018
 Identities = 22/57 (38%), Positives = 29/57 (50%)
 Frame = +1

Query: 157 MASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSRMFTLF 327
           MA D +   C +    ++SAGF  L   G L+DVTL  E    QAHK +L+     F
Sbjct: 1   MAGDVE-GFCSSIHDTSVSAGFRALYEEGLLLDVTLVIEDHQFQAHKALLATQSDYF 56


>BC109058-1|AAI09059.1|  604|Homo sapiens kelch-like 15 (Drosophila)
           protein.
          Length = 604

 Score = 38.7 bits (86), Expect = 0.018
 Identities = 22/57 (38%), Positives = 29/57 (50%)
 Frame = +1

Query: 157 MASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSRMFTLF 327
           MA D +   C +    ++SAGF  L   G L+DVTL  E    QAHK +L+     F
Sbjct: 1   MAGDVE-GFCSSIHDTSVSAGFRALYEEGLLLDVTLVIEDHQFQAHKALLATQSDYF 56


>AK057298-1|BAB71415.1|  604|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32736 fis, clone TESTI2001237, weakly similar to
           RING CANAL PROTEIN. ).
          Length = 604

 Score = 38.7 bits (86), Expect = 0.018
 Identities = 22/57 (38%), Positives = 29/57 (50%)
 Frame = +1

Query: 157 MASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSRMFTLF 327
           MA D +   C +    ++SAGF  L   G L+DVTL  E    QAHK +L+     F
Sbjct: 1   MAGDVE-GFCSSIHDTSVSAGFRALYEEGLLLDVTLVIEDHQFQAHKALLATQSDYF 56


>BX640727-1|CAE45843.1|  620|Homo sapiens hypothetical protein
           protein.
          Length = 620

 Score = 33.5 bits (73), Expect = 0.69
 Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
 Frame = +1

Query: 196 FHANMS-AGFHGLLSR----GDLVDVTLAAEGRLLQAHKLVLSRMFTLF 327
           F AN +   FHG L R    G+L DVTL    +L+  HKLVL+ +   F
Sbjct: 44  FEANEAWKDFHGSLLRFYENGELCDVTLKVGSKLISCHKLVLACVIPYF 92


>BX538173-1|CAD98048.1|  620|Homo sapiens hypothetical protein
           protein.
          Length = 620

 Score = 33.5 bits (73), Expect = 0.69
 Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
 Frame = +1

Query: 196 FHANMS-AGFHGLLSR----GDLVDVTLAAEGRLLQAHKLVLSRMFTLF 327
           F AN +   FHG L R    G+L DVTL    +L+  HKLVL+ +   F
Sbjct: 44  FEANEAWKDFHGSLLRFYENGELCDVTLKVGSKLISCHKLVLACVIPYF 92


>BC041384-1|AAH41384.1|  620|Homo sapiens kelch-like 8 (Drosophila)
           protein.
          Length = 620

 Score = 33.5 bits (73), Expect = 0.69
 Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
 Frame = +1

Query: 196 FHANMS-AGFHGLLSR----GDLVDVTLAAEGRLLQAHKLVLSRMFTLF 327
           F AN +   FHG L R    G+L DVTL    +L+  HKLVL+ +   F
Sbjct: 44  FEANEAWKDFHGSLLRFYENGELCDVTLKVGSKLISCHKLVLACVIPYF 92


>AB037799-1|BAA92616.2|  628|Homo sapiens KIAA1378 protein protein.
          Length = 628

 Score = 33.5 bits (73), Expect = 0.69
 Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
 Frame = +1

Query: 196 FHANMS-AGFHGLLSR----GDLVDVTLAAEGRLLQAHKLVLSRMFTLF 327
           F AN +   FHG L R    G+L DVTL    +L+  HKLVL+ +   F
Sbjct: 52  FEANEAWKDFHGSLLRFYENGELCDVTLKVGSKLISCHKLVLACVIPYF 100


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,449,937
Number of Sequences: 237096
Number of extensions: 1960560
Number of successful extensions: 7050
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7041
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)