Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_F05
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   3.8  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   6.6  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 105 EVRSHPYVQNHYYGHKTQSVLGEKGRR 185
           E+ +H    +HY  H  +S+    GRR
Sbjct: 562 ELSNHMVKNSHYKEHIMRSITESGGRR 588



 Score = 21.8 bits (44), Expect = 3.8
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +3

Query: 108 VRSHPYVQNHYYGHKTQSVLGEKGRRIRELTSVVQKRFNIPEQSVE 245
           +RS+   Q+H+YG + +S  G +   I E  S   +    PE+ +E
Sbjct: 789 LRSYHQQQSHHYGRRERS--GSESSSISERCSSRVESLT-PERKME 831


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 202 DVSSRILRPFSPSTLC 155
           D  S  LRPFS  +LC
Sbjct: 356 DAQSTSLRPFSRWSLC 371


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,636
Number of Sequences: 336
Number of extensions: 2308
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)