Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_F05
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3 prot... 243 3e-64
U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3 prot... 243 3e-64
U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3 prot... 243 3e-64
S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein prot... 243 3e-64
BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3 pr... 243 3e-64
BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3 pr... 243 3e-64
BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3 pr... 243 3e-64
BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for IM... 243 3e-64
BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for IM... 243 3e-64
BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3 pr... 243 3e-64
AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3 pr... 243 3e-64
AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3 pr... 243 3e-64
AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3 va... 241 8e-64
X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRN... 241 1e-63
BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for IM... 217 2e-56
AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3 pr... 180 4e-45
BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein. 129 7e-30
AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protei... 99 1e-20
L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3 prot... 87 3e-17
AK074975-1|BAC11326.1| 562|Homo sapiens protein ( Homo sapiens ... 29 7.5
AK027654-1|BAB55269.1| 574|Homo sapiens protein ( Homo sapiens ... 29 7.5
AK027501-1|BAB55158.1| 699|Homo sapiens protein ( Homo sapiens ... 29 7.5
AK027471-1|BAB55136.1| 562|Homo sapiens protein ( Homo sapiens ... 29 7.5
AK027439-1|BAB55111.1| 507|Homo sapiens protein ( Homo sapiens ... 29 7.5
AF279656-1|AAG29378.1| 1030|Homo sapiens semaphorin SEMA6A1 prot... 29 7.5
AB037789-1|BAA92606.1| 1049|Homo sapiens KIAA1368 protein protein. 29 7.5
>U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 243 bits (595), Expect = 3e-64
Identities = 122/146 (83%), Positives = 129/146 (88%), Gaps = 1/146 (0%)
Frame = +3
Query: 87 DGYSGVEVRSHPY-VQNHYYGHKTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKV 263
DGYSGVEVR P + +TQ+VLGEKGRRIRELT+VVQKRF PE SVELYAEKV
Sbjct: 32 DGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKV 91
Query: 264 ATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMK 443
ATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMK
Sbjct: 92 ATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMK 151
Query: 444 FVDGLMIHSGDPCNDYVNTATRHVLL 521
FVDGLMIHSGDP N YV+TA RHVLL
Sbjct: 152 FVDGLMIHSGDPVNYYVDTAVRHVLL 177
>U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 243 bits (595), Expect = 3e-64
Identities = 122/146 (83%), Positives = 129/146 (88%), Gaps = 1/146 (0%)
Frame = +3
Query: 87 DGYSGVEVRSHPY-VQNHYYGHKTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKV 263
DGYSGVEVR P + +TQ+VLGEKGRRIRELT+VVQKRF PE SVELYAEKV
Sbjct: 32 DGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKV 91
Query: 264 ATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMK 443
ATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMK
Sbjct: 92 ATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMK 151
Query: 444 FVDGLMIHSGDPCNDYVNTATRHVLL 521
FVDGLMIHSGDP N YV+TA RHVLL
Sbjct: 152 FVDGLMIHSGDPVNYYVDTAVRHVLL 177
>U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 243 bits (595), Expect = 3e-64
Identities = 122/146 (83%), Positives = 129/146 (88%), Gaps = 1/146 (0%)
Frame = +3
Query: 87 DGYSGVEVRSHPY-VQNHYYGHKTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKV 263
DGYSGVEVR P + +TQ+VLGEKGRRIRELT+VVQKRF PE SVELYAEKV
Sbjct: 32 DGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKV 91
Query: 264 ATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMK 443
ATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMK
Sbjct: 92 ATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMK 151
Query: 444 FVDGLMIHSGDPCNDYVNTATRHVLL 521
FVDGLMIHSGDP N YV+TA RHVLL
Sbjct: 152 FVDGLMIHSGDPVNYYVDTAVRHVLL 177
>S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein
protein.
Length = 243
Score = 243 bits (595), Expect = 3e-64
Identities = 122/146 (83%), Positives = 129/146 (88%), Gaps = 1/146 (0%)
Frame = +3
Query: 87 DGYSGVEVRSHPY-VQNHYYGHKTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKV 263
DGYSGVEVR P + +TQ+VLGEKGRRIRELT+VVQKRF PE SVELYAEKV
Sbjct: 32 DGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKV 91
Query: 264 ATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMK 443
ATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMK
Sbjct: 92 ATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMK 151
Query: 444 FVDGLMIHSGDPCNDYVNTATRHVLL 521
FVDGLMIHSGDP N YV+TA RHVLL
Sbjct: 152 FVDGLMIHSGDPVNYYVDTAVRHVLL 177
>BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 243 bits (595), Expect = 3e-64
Identities = 122/146 (83%), Positives = 129/146 (88%), Gaps = 1/146 (0%)
Frame = +3
Query: 87 DGYSGVEVRSHPY-VQNHYYGHKTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKV 263
DGYSGVEVR P + +TQ+VLGEKGRRIRELT+VVQKRF PE SVELYAEKV
Sbjct: 32 DGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKV 91
Query: 264 ATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMK 443
ATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMK
Sbjct: 92 ATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMK 151
Query: 444 FVDGLMIHSGDPCNDYVNTATRHVLL 521
FVDGLMIHSGDP N YV+TA RHVLL
Sbjct: 152 FVDGLMIHSGDPVNYYVDTAVRHVLL 177
>BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 243 bits (595), Expect = 3e-64
Identities = 122/146 (83%), Positives = 129/146 (88%), Gaps = 1/146 (0%)
Frame = +3
Query: 87 DGYSGVEVRSHPY-VQNHYYGHKTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKV 263
DGYSGVEVR P + +TQ+VLGEKGRRIRELT+VVQKRF PE SVELYAEKV
Sbjct: 32 DGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKV 91
Query: 264 ATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMK 443
ATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMK
Sbjct: 92 ATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMK 151
Query: 444 FVDGLMIHSGDPCNDYVNTATRHVLL 521
FVDGLMIHSGDP N YV+TA RHVLL
Sbjct: 152 FVDGLMIHSGDPVNYYVDTAVRHVLL 177
>BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 243 bits (595), Expect = 3e-64
Identities = 122/146 (83%), Positives = 129/146 (88%), Gaps = 1/146 (0%)
Frame = +3
Query: 87 DGYSGVEVRSHPY-VQNHYYGHKTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKV 263
DGYSGVEVR P + +TQ+VLGEKGRRIRELT+VVQKRF PE SVELYAEKV
Sbjct: 32 DGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKV 91
Query: 264 ATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMK 443
ATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMK
Sbjct: 92 ATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMK 151
Query: 444 FVDGLMIHSGDPCNDYVNTATRHVLL 521
FVDGLMIHSGDP N YV+TA RHVLL
Sbjct: 152 FVDGLMIHSGDPVNYYVDTAVRHVLL 177
>BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for
IMAGE:4347401) protein.
Length = 242
Score = 243 bits (595), Expect = 3e-64
Identities = 122/146 (83%), Positives = 129/146 (88%), Gaps = 1/146 (0%)
Frame = +3
Query: 87 DGYSGVEVRSHPY-VQNHYYGHKTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKV 263
DGYSGVEVR P + +TQ+VLGEKGRRIRELT+VVQKRF PE SVELYAEKV
Sbjct: 31 DGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKV 90
Query: 264 ATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMK 443
ATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMK
Sbjct: 91 ATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMK 150
Query: 444 FVDGLMIHSGDPCNDYVNTATRHVLL 521
FVDGLMIHSGDP N YV+TA RHVLL
Sbjct: 151 FVDGLMIHSGDPVNYYVDTAVRHVLL 176
>BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for
IMAGE:3544292) protein.
Length = 242
Score = 243 bits (595), Expect = 3e-64
Identities = 122/146 (83%), Positives = 129/146 (88%), Gaps = 1/146 (0%)
Frame = +3
Query: 87 DGYSGVEVRSHPY-VQNHYYGHKTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKV 263
DGYSGVEVR P + +TQ+VLGEKGRRIRELT+VVQKRF PE SVELYAEKV
Sbjct: 31 DGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKV 90
Query: 264 ATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMK 443
ATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMK
Sbjct: 91 ATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMK 150
Query: 444 FVDGLMIHSGDPCNDYVNTATRHVLL 521
FVDGLMIHSGDP N YV+TA RHVLL
Sbjct: 151 FVDGLMIHSGDPVNYYVDTAVRHVLL 176
>BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 243 bits (595), Expect = 3e-64
Identities = 122/146 (83%), Positives = 129/146 (88%), Gaps = 1/146 (0%)
Frame = +3
Query: 87 DGYSGVEVRSHPY-VQNHYYGHKTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKV 263
DGYSGVEVR P + +TQ+VLGEKGRRIRELT+VVQKRF PE SVELYAEKV
Sbjct: 32 DGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKV 91
Query: 264 ATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMK 443
ATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMK
Sbjct: 92 ATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMK 151
Query: 444 FVDGLMIHSGDPCNDYVNTATRHVLL 521
FVDGLMIHSGDP N YV+TA RHVLL
Sbjct: 152 FVDGLMIHSGDPVNYYVDTAVRHVLL 177
>AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 243 bits (595), Expect = 3e-64
Identities = 122/146 (83%), Positives = 129/146 (88%), Gaps = 1/146 (0%)
Frame = +3
Query: 87 DGYSGVEVRSHPY-VQNHYYGHKTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKV 263
DGYSGVEVR P + +TQ+VLGEKGRRIRELT+VVQKRF PE SVELYAEKV
Sbjct: 32 DGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKV 91
Query: 264 ATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMK 443
ATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMK
Sbjct: 92 ATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMK 151
Query: 444 FVDGLMIHSGDPCNDYVNTATRHVLL 521
FVDGLMIHSGDP N YV+TA RHVLL
Sbjct: 152 FVDGLMIHSGDPVNYYVDTAVRHVLL 177
>AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 243 bits (595), Expect = 3e-64
Identities = 122/146 (83%), Positives = 129/146 (88%), Gaps = 1/146 (0%)
Frame = +3
Query: 87 DGYSGVEVRSHPY-VQNHYYGHKTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKV 263
DGYSGVEVR P + +TQ+VLGEKGRRIRELT+VVQKRF PE SVELYAEKV
Sbjct: 32 DGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKV 91
Query: 264 ATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMK 443
ATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMK
Sbjct: 92 ATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMK 151
Query: 444 FVDGLMIHSGDPCNDYVNTATRHVLL 521
FVDGLMIHSGDP N YV+TA RHVLL
Sbjct: 152 FVDGLMIHSGDPVNYYVDTAVRHVLL 177
>AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3
variant protein.
Length = 243
Score = 241 bits (591), Expect = 8e-64
Identities = 121/146 (82%), Positives = 129/146 (88%), Gaps = 1/146 (0%)
Frame = +3
Query: 87 DGYSGVEVRSHPY-VQNHYYGHKTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKV 263
DGYSGVEVR P + +TQ+VLGEKGRRIRELT+VVQKRF PE SVELYAE+V
Sbjct: 32 DGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEEV 91
Query: 264 ATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMK 443
ATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMK
Sbjct: 92 ATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMK 151
Query: 444 FVDGLMIHSGDPCNDYVNTATRHVLL 521
FVDGLMIHSGDP N YV+TA RHVLL
Sbjct: 152 FVDGLMIHSGDPVNYYVDTAVRHVLL 177
>X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRNA
for 40S ribosomal protein s3. ).
Length = 243
Score = 241 bits (590), Expect = 1e-63
Identities = 121/146 (82%), Positives = 128/146 (87%), Gaps = 1/146 (0%)
Frame = +3
Query: 87 DGYSGVEVRSHPY-VQNHYYGHKTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKV 263
DGYSGVEVR P + +TQ+VLGEKGRRIRELT+VVQKRF PE SVELYAEKV
Sbjct: 32 DGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKV 91
Query: 264 ATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMK 443
ATRGLCAIAQAE LRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMK
Sbjct: 92 ATRGLCAIAQAECLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMK 151
Query: 444 FVDGLMIHSGDPCNDYVNTATRHVLL 521
FVDGLMIHSGDP N YV+TA RHVLL
Sbjct: 152 FVDGLMIHSGDPVNYYVDTAVRHVLL 177
>BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for
IMAGE:40134452) protein.
Length = 133
Score = 217 bits (530), Expect = 2e-56
Identities = 105/116 (90%), Positives = 110/116 (94%)
Frame = +3
Query: 174 KGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYG 353
+GRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYG
Sbjct: 6 QGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYG 65
Query: 354 VLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLL 521
VLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLL
Sbjct: 66 VLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLL 121
>AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3
protein.
Length = 158
Score = 180 bits (437), Expect = 4e-45
Identities = 86/92 (93%), Positives = 89/92 (96%)
Frame = +3
Query: 246 LYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQ 425
LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQ
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 60
Query: 426 RAKSMKFVDGLMIHSGDPCNDYVNTATRHVLL 521
RAKSMKFVDGLMIHSGDP N YV+TA RHVLL
Sbjct: 61 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLL 92
>BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein.
Length = 117
Score = 129 bits (311), Expect = 7e-30
Identities = 67/86 (77%), Positives = 72/86 (83%), Gaps = 1/86 (1%)
Frame = +3
Query: 87 DGYSGVEVRSHPY-VQNHYYGHKTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKV 263
DGYSGVEVR P + +TQ+VLGEKGRRIRELT+VVQKRF PE SVELYAEKV
Sbjct: 32 DGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKV 91
Query: 264 ATRGLCAIAQAESLRYKLIGGLAVRR 341
ATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 92 ATRGLCAIAQAESLRYKLLGGLAVRR 117
>AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protein
S3 protein.
Length = 117
Score = 98.7 bits (235), Expect = 1e-20
Identities = 46/51 (90%), Positives = 48/51 (94%)
Frame = +3
Query: 369 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLL 521
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLL
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLL 51
>L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3
protein.
Length = 95
Score = 87.4 bits (207), Expect = 3e-17
Identities = 46/64 (71%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Frame = +3
Query: 87 DGYSGVEVRSHPY-VQNHYYGHKTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKV 263
DGYSGVEVR P + +TQ+VLGEKGRRIRELT+VVQKRF PE SVELYAEKV
Sbjct: 32 DGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKV 91
Query: 264 ATRG 275
ATRG
Sbjct: 92 ATRG 95
>AK074975-1|BAC11326.1| 562|Homo sapiens protein ( Homo sapiens
cDNA FLJ90494 fis, clone NT2RP3003614, highly similar to
Semaphorin 6A precursor. ).
Length = 562
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = -3
Query: 264 LPSLRIAPLTAQGY*IASAQQMSAHEFYDLSLQARSASCGHNNDFERMGVNAPPH 100
+PS+ + P+T QGY Q E ++L+ ++A+ + E + +P H
Sbjct: 344 IPSVVVLPITQQGYQHEYVDQPKMSEVAQMALEDQAATLEYKTIKEHLSSKSPNH 398
>AK027654-1|BAB55269.1| 574|Homo sapiens protein ( Homo sapiens
cDNA FLJ14748 fis, clone NT2RP3002869, highly similar to
Mus musculus semaphorin VIa mRNA. ).
Length = 574
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = -3
Query: 264 LPSLRIAPLTAQGY*IASAQQMSAHEFYDLSLQARSASCGHNNDFERMGVNAPPH 100
+PS+ + P+T QGY Q E ++L+ ++A+ + E + +P H
Sbjct: 356 IPSVVVLPITQQGYQHEYVDQPKMSEVAQMALEDQAATLEYKTIKEHLSSKSPNH 410
>AK027501-1|BAB55158.1| 699|Homo sapiens protein ( Homo sapiens
cDNA FLJ14595 fis, clone NT2RM4002194, highly similar to
Mus musculus semaphorin VIa mRNA. ).
Length = 699
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = -3
Query: 264 LPSLRIAPLTAQGY*IASAQQMSAHEFYDLSLQARSASCGHNNDFERMGVNAPPH 100
+PS+ + P+T QGY Q E ++L+ ++A+ + E + +P H
Sbjct: 481 IPSVVVLPITQQGYQHEYVDQPKMSEVAQMALEDQAATLEYKTIKEHLSSKSPNH 535
>AK027471-1|BAB55136.1| 562|Homo sapiens protein ( Homo sapiens
cDNA FLJ14565 fis, clone NT2RM4000233, highly similar to
Mus musculus semaphorin VIa mRNA. ).
Length = 562
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = -3
Query: 264 LPSLRIAPLTAQGY*IASAQQMSAHEFYDLSLQARSASCGHNNDFERMGVNAPPH 100
+PS+ + P+T QGY Q E ++L+ ++A+ + E + +P H
Sbjct: 344 IPSVVVLPITQQGYQHEYVDQPKMSEVAQMALEDQAATLEYKTIKEHLSSKSPNH 398
>AK027439-1|BAB55111.1| 507|Homo sapiens protein ( Homo sapiens
cDNA FLJ14533 fis, clone NT2RM2000407, moderately
similar to Mus musculus semaphorin VIa mRNA. ).
Length = 507
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = -3
Query: 264 LPSLRIAPLTAQGY*IASAQQMSAHEFYDLSLQARSASCGHNNDFERMGVNAPPH 100
+PS+ + P+T QGY Q E ++L+ ++A+ + E + +P H
Sbjct: 289 IPSVVVLPITQQGYQHEYVDQPKMSEVAQMALEDQAATLEYKTIKEHLSSKSPNH 343
>AF279656-1|AAG29378.1| 1030|Homo sapiens semaphorin SEMA6A1
protein.
Length = 1030
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = -3
Query: 264 LPSLRIAPLTAQGY*IASAQQMSAHEFYDLSLQARSASCGHNNDFERMGVNAPPH 100
+PS+ + P+T QGY Q E ++L+ ++A+ + E + +P H
Sbjct: 812 IPSVVVLPITQQGYQHEYVDQPKMSEVAQMALEDQAATLEYKTIKEHLSSKSPNH 866
>AB037789-1|BAA92606.1| 1049|Homo sapiens KIAA1368 protein protein.
Length = 1049
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = -3
Query: 264 LPSLRIAPLTAQGY*IASAQQMSAHEFYDLSLQARSASCGHNNDFERMGVNAPPH 100
+PS+ + P+T QGY Q E ++L+ ++A+ + E + +P H
Sbjct: 831 IPSVVVLPITQQGYQHEYVDQPKMSEVAQMALEDQAATLEYKTIKEHLSSKSPNH 885
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,077,607
Number of Sequences: 237096
Number of extensions: 1492012
Number of successful extensions: 3450
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 3330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3434
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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