Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_F04
         (450 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370038-1|ABD18599.1|  122|Anopheles gambiae putative TIL domai...    23   3.8  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    23   3.8  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    22   8.7  

>DQ370038-1|ABD18599.1|  122|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 122

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -1

Query: 354 DAGIAMRP*S*FRISNICKTYWNLSFR-GKYCDIP*H 247
           D G  +RP + FRI+ IC   ++  ++  + C +P H
Sbjct: 72  DGGKCVRPDTYFRINCICGEEYDREYKDDEKCILPEH 108


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +1

Query: 190 IGTWGQIFKL*LVRQAS*AMSWYITIFSSE 279
           IGTW  I  + LV   + A+  YIT F+ E
Sbjct: 612 IGTWISIILVVLVAVDASALVCYITRFTEE 641


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 307  IRNSKSRLWPHGNPGILYQV 366
            +RN+  ++W   NP +L QV
Sbjct: 1534 LRNTIKQIWKRTNPKLLDQV 1553


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 514,988
Number of Sequences: 2352
Number of extensions: 11205
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38268990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)