Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_F03
         (519 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   2.8  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   6.5  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   6.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.7  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 12/48 (25%), Positives = 24/48 (50%)
 Frame = +2

Query: 122 QIC*HLLLLVSRTLRM*GFSETVLQITIWRYLHFVQVMQPGNFMEHSM 265
           Q+  H +  V +T  M  FS+     T+W++ +   +    NF E+++
Sbjct: 385 QLVLHTVKTVLKTT-MSTFSDITFMRTVWKFFNIFLITPFYNFNENTI 431


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -3

Query: 292 LVLDYYKELHRMLHEIPGLHHLY 224
           ++L  YKEL+R++ +    +HL+
Sbjct: 173 MILMRYKELNRVILDNMSRNHLF 195


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 218 HFVQVMQPGNFMEHSM 265
           H+V +M+  +FME SM
Sbjct: 138 HWVTIMKEWSFMEMSM 153


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/20 (35%), Positives = 9/20 (45%)
 Frame = -1

Query: 228 CTKCK*RHIVIWRTVSENPH 169
           C  C+ R  + WR     PH
Sbjct: 587 CKPCRPREQLTWRRNFHGPH 606


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/20 (35%), Positives = 9/20 (45%)
 Frame = -1

Query: 228 CTKCK*RHIVIWRTVSENPH 169
           C  C+ R  + WR     PH
Sbjct: 479 CKPCRPREQLTWRRNFHGPH 498


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,927
Number of Sequences: 336
Number of extensions: 2696
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)