Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_F03
         (519 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   4.7  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   4.7  
AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.          23   6.2  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 244 EFHGAFDGVPYSSL 285
           +FH AFD +P+S L
Sbjct: 615 DFHAAFDSLPHSLL 628


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 431 TLSTPATLSSMRSKQTGHVGSSVCEG 354
           T  TPA+LSS  S  +    +S+C G
Sbjct: 788 TPPTPASLSSSSSSSSSASSTSLCGG 813


>AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.
          Length = 412

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -3

Query: 178 EPSHAQCPADKQQQMLTNLMHLELQALTIGRESLPLQL 65
           E  HA     +Q+Q +   +  +L ALT  R +L + L
Sbjct: 121 EQLHAAQQETQQEQEMKKALQKQLDALTDSRNALYIDL 158


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 544,833
Number of Sequences: 2352
Number of extensions: 11817
Number of successful extensions: 28
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47360208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)