Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_F03
(519 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical pr... 122 1e-28
Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical pr... 45 3e-05
AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical... 43 2e-04
AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical... 43 2e-04
AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical ... 42 2e-04
Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical ... 40 0.001
AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical ... 39 0.002
AF101318-5|AAC69347.1| 574|Caenorhabditis elegans Hypothetical ... 38 0.004
Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical p... 38 0.006
U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical pr... 38 0.006
AC024791-5|AAF60661.2| 468|Caenorhabditis elegans Hypothetical ... 38 0.006
U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical pr... 36 0.017
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 36 0.023
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 36 0.023
Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical pr... 36 0.023
Z11115-11|CAA77447.1| 161|Caenorhabditis elegans Hypothetical p... 35 0.030
AC024812-2|AAF59555.1| 304|Caenorhabditis elegans Hypothetical ... 35 0.030
AC024826-3|AAP13746.1| 343|Caenorhabditis elegans Hypothetical ... 35 0.040
AC024826-2|AAF60798.1| 413|Caenorhabditis elegans Hypothetical ... 35 0.040
Z82080-4|CAC70117.1| 1125|Caenorhabditis elegans Hypothetical pr... 34 0.053
U23147-7|AAC46691.1| 596|Caenorhabditis elegans Rapsyn protein ... 34 0.053
AL031620-4|CAA20925.1| 456|Caenorhabditis elegans Hypothetical ... 34 0.070
U80449-2|AAB37826.1| 112|Caenorhabditis elegans Hypothetical pr... 33 0.093
AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical ... 33 0.093
Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical p... 33 0.12
Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical pr... 33 0.12
AL110479-9|CAB60315.3| 583|Caenorhabditis elegans Hypothetical ... 33 0.16
AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical ... 33 0.16
AF101318-6|AAC69348.2| 946|Caenorhabditis elegans Hypothetical ... 32 0.21
AC006712-2|AAK39324.1| 754|Caenorhabditis elegans Hypothetical ... 32 0.21
AC024806-4|AAF59525.1| 192|Caenorhabditis elegans Hypothetical ... 32 0.28
U80442-6|AAB37669.1| 294|Caenorhabditis elegans Hypothetical pr... 31 0.37
AF083226-1|AAD03684.1| 560|Caenorhabditis elegans nuclear recep... 31 0.65
AF036702-12|AAP31437.1| 559|Caenorhabditis elegans Nuclear horm... 31 0.65
AF036702-11|AAP31436.1| 560|Caenorhabditis elegans Nuclear horm... 31 0.65
AC103567-8|AAL35729.1| 305|Caenorhabditis elegans Hypothetical ... 31 0.65
Z73422-6|CAH04641.1| 316|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z70757-5|CAA94801.1| 110|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z46242-13|CAA86328.1| 135|Caenorhabditis elegans Hypothetical p... 30 1.1
Z35595-4|CAA84635.1| 170|Caenorhabditis elegans Hypothetical pr... 30 1.1
X89223-1|CAA61507.1| 582|Caenorhabditis elegans sli-1 protein. 30 1.1
U97193-14|AAB52442.2| 381|Caenorhabditis elegans Ring finger pr... 30 1.1
U58730-5|AAK84546.1| 582|Caenorhabditis elegans Suppressor of l... 30 1.1
U58730-4|AAK84547.1| 565|Caenorhabditis elegans Suppressor of l... 30 1.1
U58730-3|AAT92069.1| 523|Caenorhabditis elegans Suppressor of l... 30 1.1
AB077287-1|BAB83695.1| 101|Caenorhabditis elegans RING-H2 finge... 30 1.1
AL033514-11|CAA22083.2| 298|Caenorhabditis elegans Hypothetical... 29 2.0
Z99281-51|CAE18031.2| 281|Caenorhabditis elegans Hypothetical p... 29 2.6
Z69384-3|CAA93418.1| 475|Caenorhabditis elegans Hypothetical pr... 29 2.6
U41026-2|AAM51523.1| 295|Caenorhabditis elegans Hypothetical pr... 29 2.6
U00048-10|AAB53823.2| 852|Caenorhabditis elegans Related to yea... 28 3.5
Z82280-5|CAB05266.1| 294|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z70681-2|CAA94578.2| 203|Caenorhabditis elegans Hypothetical pr... 27 6.1
AC199170-5|ABO33263.1| 95|Caenorhabditis elegans Hypothetical ... 27 6.1
Z99710-11|CAB82211.1| 342|Caenorhabditis elegans Hypothetical p... 27 8.0
Z99709-14|CAB76414.1| 342|Caenorhabditis elegans Hypothetical p... 27 8.0
Z92773-1|CAB07131.1| 395|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z46787-5|CAA86743.1| 409|Caenorhabditis elegans Hypothetical pr... 27 8.0
AL022271-1|CAA18349.1| 919|Caenorhabditis elegans Hypothetical ... 27 8.0
>U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical
protein EEED8.16 protein.
Length = 590
Score = 122 bits (295), Expect = 1e-28
Identities = 63/176 (35%), Positives = 97/176 (55%), Gaps = 6/176 (3%)
Frame = +1
Query: 10 LVEVTKGVLHLYXXXXXXXXXXXXT--LCLLSVPGALGASDLLAFAAACQQDIAHVRVLR 183
L E T+G++H Y LC+ +VP + ++++F I ++V+R
Sbjct: 132 LTEKTEGIMHFYKYNDEKLTKVAQCRMLCMYAVPAQVEVREIISFMCISLPMIVSIKVVR 191
Query: 184 DGSPDHYMALLTFRTSDAAREFHGAFDGVPYSSLEPNALCHMAWVSRVEWARNG----TA 351
D +P+ YM ++ F+ + A F+ F+ P++ LE + C + +V R+E + +
Sbjct: 192 DPAPNQYMLIIKFKEHNDAVTFYEEFNNCPFNDLE-SYCCTLFFVDRIECTTSNDLFSSD 250
Query: 352 PPSHTELPTCPVCLERMDESVAGVLSVQCAHAFHADCLTRWRDARCPVCRCAQTPE 519
S TELPTC VCLERMD+SV +L C H+FHA CL +W D CPVCR Q+PE
Sbjct: 251 DTSLTELPTCAVCLERMDDSVLAIL---CNHSFHARCLEQWADNTCPVCRYVQSPE 303
>Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical
protein W02A11.3 protein.
Length = 489
Score = 45.2 bits (102), Expect = 3e-05
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +1
Query: 376 TCPVCLERMDESVAGVLSVQCAHAFHADCLTRWRD--ARCPVCR 501
TC VCL ++ + + ++C H FH +C+ +W D RCP+CR
Sbjct: 432 TCTVCLSSFEDGES-IQKLRCNHVFHPECIYKWLDINKRCPMCR 474
>AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical
protein C09E7.8b protein.
Length = 1080
Score = 42.7 bits (96), Expect = 2e-04
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 6/98 (6%)
Frame = +1
Query: 226 TSDAAREFHGAFDGVPYSSLEPNALCHMAWVSRVEWARNG--TAPPSHTELPT--CPVCL 393
TS H + V S+ P L + R +++ TA + TEL C +CL
Sbjct: 971 TSSRGNVQHHSGSAVRGQSITPTGLSQVPMSPRKLFSQPNIVTASITSTELDDTECAICL 1030
Query: 394 ERMDESVAGVLSVQCAHAFHADCLTRWRDAR--CPVCR 501
+ M + + QC FH +C T+W + + CP CR
Sbjct: 1031 DEMT-NFKETIKCQCRRRFHLECATKWLNEKRECPTCR 1067
>AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical
protein C09E7.8a protein.
Length = 1114
Score = 42.7 bits (96), Expect = 2e-04
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 6/98 (6%)
Frame = +1
Query: 226 TSDAAREFHGAFDGVPYSSLEPNALCHMAWVSRVEWARNG--TAPPSHTELPT--CPVCL 393
TS H + V S+ P L + R +++ TA + TEL C +CL
Sbjct: 1005 TSSRGNVQHHSGSAVRGQSITPTGLSQVPMSPRKLFSQPNIVTASITSTELDDTECAICL 1064
Query: 394 ERMDESVAGVLSVQCAHAFHADCLTRWRDAR--CPVCR 501
+ M + + QC FH +C T+W + + CP CR
Sbjct: 1065 DEMT-NFKETIKCQCRRRFHLECATKWLNEKRECPTCR 1101
>AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical
protein C09E7.5 protein.
Length = 496
Score = 42.3 bits (95), Expect = 2e-04
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 346 TAPPSHTELPTCPVCLERMDESVAGVLSVQCAHAFHADCLTRWRDAR--CPVCR 501
+AP S + C +CLE M + + +C FH+ C T+W + + CP CR
Sbjct: 431 SAPSSELDDTECAICLEEM-YNFKETIKCECRRRFHSKCATKWLNEKRECPTCR 483
>Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical
protein F55A11.3 protein.
Length = 610
Score = 41.5 bits (93), Expect = 3e-04
Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +1
Query: 376 TCPVCLERMDESVAGVLSVQCAHAFHADCLTRW--RDARCPVCR 501
TC +C E M A + C+H FHA CL W R CP CR
Sbjct: 291 TCIICREEMTVD-ASPKRLPCSHVFHAHCLRSWFQRQQTCPTCR 333
>AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical
protein C09E7.9 protein.
Length = 789
Score = 39.5 bits (88), Expect = 0.001
Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 6/98 (6%)
Frame = +1
Query: 226 TSDAAREFHGAFDGVPYSSLEPNALCHMAWVSRVEWARNG--TAPPSHTELPT--CPVCL 393
TS H + V S+ P L + R +++ TA TEL C +CL
Sbjct: 680 TSSRGNVQHHSGSAVRGQSITPTGLSQVPMSPRKLFSQPDIVTASVPSTELDDTECAICL 739
Query: 394 ERMDESVAGVLSVQCAHAFHADCLTRWRDAR--CPVCR 501
+ M + + +C FH C T+W + + CP CR
Sbjct: 740 DEMT-NFKETIKCECRRRFHLKCATKWLNEKRECPTCR 776
>AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical
protein Y47D3B.11 protein.
Length = 487
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 358 SHTELPTCPVCLERMDESVAGVLSVQCAHAFHADCLTRW--RDARCPVCR 501
SH+ C +CLE +E + + C H FH C+ W RCP+C+
Sbjct: 310 SHSAQERCVICLEEYEEGTE-LRVLFCGHEFHPKCVDPWLLSKRRCPLCQ 358
>AF101318-5|AAC69347.1| 574|Caenorhabditis elegans Hypothetical
protein Y73C8C.7 protein.
Length = 574
Score = 37.9 bits (84), Expect = 0.004
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +1
Query: 352 PPSHTELPTCPVCLERMDESVAGVLSVQCAHAFHADCLTRWRDAR--CPVC 498
PP+ + C VCLE M E + + C +H C +W + CP C
Sbjct: 510 PPNELDDNECLVCLEDMKEEHETLKCLDCKRKYHTGCAQKWFKVKRICPTC 560
>Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 37.5 bits (83), Expect = 0.006
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 379 CPVCLERMDESVAGVLSVQCAHAFHADCLTRW--RDARCPVCRC 504
C VC E + S + C+H FH CL W +D+ CP CRC
Sbjct: 335 CVVCWELLGTS----RRLPCSHQFHDWCLMWWLAQDSSCPTCRC 374
>Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 37.5 bits (83), Expect = 0.006
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 379 CPVCLERMDESVAGVLSVQCAHAFHADCLTRW--RDARCPVCRC 504
C VC E + S + C+H FH CL W +D+ CP CRC
Sbjct: 335 CVVCWELLGTS----RRLPCSHQFHDWCLMWWLAQDSSCPTCRC 374
>U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical
protein B0432.13 protein.
Length = 451
Score = 37.5 bits (83), Expect = 0.006
Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +1
Query: 346 TAPPSHTELPTCPVCLERMDESVAGVLSVQCAHAFHADCLTRW--RDARCPVCR 501
T+ P+ + +C +C E + ++ + ++ C H +H C+++W +CP CR
Sbjct: 2 TSQPTSSLQGSCSICFEDLKQNDK-ISAIVCGHIYHHGCISQWIATKRQCPSCR 54
>AC024791-5|AAF60661.2| 468|Caenorhabditis elegans Hypothetical
protein Y47G6A.14 protein.
Length = 468
Score = 37.5 bits (83), Expect = 0.006
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 11/62 (17%)
Frame = +1
Query: 367 ELPTCPVCLERMDESVAGVLSVQCAHAFHADCLTR----WRDA-------RCPVCRCAQT 513
ELPTCPVC E D+ A + + C H+ C+ + DA +CP CR +
Sbjct: 6 ELPTCPVCQEEFDDQKAPFI-ISCGHSLCETCIVHLKSDYSDAYGSGGQTQCPTCRAVVS 64
Query: 514 PE 519
E
Sbjct: 65 KE 66
>U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical
protein ZC13.1b protein.
Length = 398
Score = 35.9 bits (79), Expect = 0.017
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +1
Query: 343 GTAPPSHTELPTCPVCLERMDESVAGVLSVQCAHAFHADCLTRWRDAR--CPVCRCAQTP 516
GT H E P C VC + + + ++C H F C+ W D + CP+CR T
Sbjct: 326 GTKSVDHEEQP-CAVCHGDLLQPI----KLECTHVFCKFCIETWLDQKSTCPICRAEVTK 380
Query: 517 E 519
+
Sbjct: 381 D 381
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
H05L14.2 protein.
Length = 2162
Score = 35.5 bits (78), Expect = 0.023
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +1
Query: 379 CPVCLERMDESVAGVLSVQCAHAFHADCLTRWR--DARCPVC 498
C +C E ++E+V V C +H C++RW ++ CP C
Sbjct: 2107 CLICTEIIEEAVETVTCDTCTREYHYHCISRWLKINSVCPQC 2148
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 35.5 bits (78), Expect = 0.023
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +1
Query: 379 CPVCLERMDESVAGVLSVQCAHAFHADCLTRWR--DARCPVC 498
C +C E ++E+V V C +H C++RW ++ CP C
Sbjct: 2107 CLICTEIIEEAVETVTCDTCTREYHYHCISRWLKINSVCPQC 2148
>Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical
protein C16C10.7 protein.
Length = 235
Score = 35.5 bits (78), Expect = 0.023
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Frame = +1
Query: 379 CPVCLERMDESVAGVLSVQCAHAFHADCLTRWRDAR-----CPVCRCA 507
C +CL+ ++V + C H F CL++W D R CPVC+ A
Sbjct: 26 CNICLDAAKDAVVSL----CGHLFCWPCLSQWLDTRPNNQVCPVCKSA 69
>Z11115-11|CAA77447.1| 161|Caenorhabditis elegans Hypothetical
protein ZK637.14 protein.
Length = 161
Score = 35.1 bits (77), Expect = 0.030
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +1
Query: 421 VLSVQCAHAFHADCLTRWRDAR--CPVCR 501
V+ + C H FH CLT W +A+ CP CR
Sbjct: 106 VIVMPCKHRFHYFCLTLWLEAQQTCPTCR 134
>AC024812-2|AAF59555.1| 304|Caenorhabditis elegans Hypothetical
protein Y54E10BR.3 protein.
Length = 304
Score = 35.1 bits (77), Expect = 0.030
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = +1
Query: 379 CPVCLE--RMDESVAGVLSVQCAHAFHADCLTRWRDAR--CPVCR 501
C C + ++DE V ++ C H FH C+ W + CPVCR
Sbjct: 238 CTTCFDTFKLDEDVG---ALDCNHIFHRPCIEPWLKTKNSCPVCR 279
>AC024826-3|AAP13746.1| 343|Caenorhabditis elegans Hypothetical
protein Y55F3AM.6b protein.
Length = 343
Score = 34.7 bits (76), Expect = 0.040
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 364 TELPTCPVCLERMDESVA--GVLSVQCAHAFHADCLTRWR 477
TE TC +C+E + E G+L+ C H F DC+ +WR
Sbjct: 208 TEQKTCGICMENIFEKNLRFGILN-GCQHCFCLDCIRQWR 246
>AC024826-2|AAF60798.1| 413|Caenorhabditis elegans Hypothetical
protein Y55F3AM.6a protein.
Length = 413
Score = 34.7 bits (76), Expect = 0.040
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 364 TELPTCPVCLERMDESVA--GVLSVQCAHAFHADCLTRWR 477
TE TC +C+E + E G+L+ C H F DC+ +WR
Sbjct: 208 TEQKTCGICMENIFEKNLRFGILN-GCQHCFCLDCIRQWR 246
>Z82080-4|CAC70117.1| 1125|Caenorhabditis elegans Hypothetical protein
W09G3.6 protein.
Length = 1125
Score = 34.3 bits (75), Expect = 0.053
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Frame = +1
Query: 286 EPNALCHMAWVSRVEWARNGTAP-PSHTE--LPT---CPVCLERMDESVAG----VLSVQ 435
+P A SR + NG+AP PS + + T CP+C + V G V+S
Sbjct: 1014 KPPPTAAAATSSRKVTSPNGSAPAPSISSWIVDTNGKCPMCTLPVKMVVGGADRGVISYF 1073
Query: 436 CAHAFHADCLTRWRDARCPVCR 501
C H +H CLT +A C CR
Sbjct: 1074 CGHVYHKICLTGRFNAGCVACR 1095
>U23147-7|AAC46691.1| 596|Caenorhabditis elegans Rapsyn protein 1
protein.
Length = 596
Score = 34.3 bits (75), Expect = 0.053
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +1
Query: 379 CPVCLERMDESVAGVLSVQCAHAFHADCLTRW----RDARCPVCRC 504
C C +R + +++C+H FH CL + D CP CRC
Sbjct: 374 CNFCGQRYGLKDESLQALRCSHIFHEKCLHTYLLQRTDQTCPKCRC 419
>AL031620-4|CAA20925.1| 456|Caenorhabditis elegans Hypothetical
protein C18B12.4 protein.
Length = 456
Score = 33.9 bits (74), Expect = 0.070
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Frame = +1
Query: 376 TCPVCLERMDESVAGVLSVQCAHAFHADCLTRWRDAR---CPVCR 501
TC +CLE S + + C H FH +C+ W CP+C+
Sbjct: 246 TCAICLESF-ASGEKLRHLPCRHVFHCNCIDVWLTQTRKICPLCK 289
>U80449-2|AAB37826.1| 112|Caenorhabditis elegans Hypothetical
protein R10A10.2 protein.
Length = 112
Score = 33.5 bits (73), Expect = 0.093
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = +1
Query: 388 CLERMDESVAGVLSV--QCAHAFHADCLTRW--RDARCPVCR 501
CL E A V C H+FH C+T+W ++ RCP+C+
Sbjct: 61 CLRCQSEPSAECYVVWGDCNHSFHHCCMTQWIRQNNRCPLCQ 102
>AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical
protein Y54E10A.11 protein.
Length = 1446
Score = 33.5 bits (73), Expect = 0.093
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Frame = +1
Query: 331 WARNGTAPPSHTELPT-CPVCLERMDESVAGVLSVQCAHAFHADCLTRW----RDARCPV 495
W RN E T C + + + + + QC + FH++CL +W + CP+
Sbjct: 1381 WKRNVDKGVEGVEDCTICMMTVHQQTHQLPKIKCKQCKNKFHSNCLYKWFESSNQSTCPL 1440
Query: 496 CR 501
CR
Sbjct: 1441 CR 1442
>Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 33.1 bits (72), Expect = 0.12
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Frame = +1
Query: 367 ELPTCPVCLERMDESVAGVLSVQCAHAFHADCL-----TRWRDARCPVCR 501
+L TCP+CL+R + + C H F CL T R+ +CP CR
Sbjct: 39 QLLTCPICLDRYKQPKL----LPCQHTFCYPCLESCADTLHRNLKCPECR 84
>Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 33.1 bits (72), Expect = 0.12
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Frame = +1
Query: 367 ELPTCPVCLERMDESVAGVLSVQCAHAFHADCL-----TRWRDARCPVCR 501
+L TCP+CL+R + + C H F CL T R+ +CP CR
Sbjct: 39 QLLTCPICLDRYKQPKL----LPCQHTFCYPCLESCADTLHRNLKCPECR 84
>AL110479-9|CAB60315.3| 583|Caenorhabditis elegans Hypothetical
protein Y105C5B.11 protein.
Length = 583
Score = 32.7 bits (71), Expect = 0.16
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +1
Query: 379 CPVCLERMDESVAGVLSVQCAHAFHADCLTRWRDAR--CPVC 498
C +C E +D V +C +H+ C T+W + CP C
Sbjct: 528 CIICREDIDLENGTVQCPRCTEIYHSHCATQWLSQKPTCPKC 569
>AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical
protein T22B2.1 protein.
Length = 955
Score = 32.7 bits (71), Expect = 0.16
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = +1
Query: 379 CPVCLERMDESVAGVLSVQCAHAFHADCLTRWRDAR--CPVCRCAQTPE 519
C VCLE M ++ V C +H C+ +W + CP C E
Sbjct: 900 CLVCLEDMVKNQDTVKCSTCKRQYHTTCVQKWFKIKRICPTCNAGLLDE 948
>AF101318-6|AAC69348.2| 946|Caenorhabditis elegans Hypothetical
protein Y73C8C.8 protein.
Length = 946
Score = 32.3 bits (70), Expect = 0.21
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = +1
Query: 379 CPVCLERMDESVAGVLSVQCAHAFHADCLTRWRDAR--CPVC 498
C VCLE M E + C +H C +W + CP C
Sbjct: 891 CLVCLEDMMEEHETLKCSNCKRQYHTGCAQKWFKVKRICPTC 932
>AC006712-2|AAK39324.1| 754|Caenorhabditis elegans Hypothetical
protein Y119C1B.5 protein.
Length = 754
Score = 32.3 bits (70), Expect = 0.21
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = +1
Query: 379 CPVCLERMDESVAGVLSVQCAHAFHADCLTRWRDAR--CPVC 498
C +C M E C H FH CL +W + CP+C
Sbjct: 604 CAICFIEMKEEAR---ITPCKHYFHGPCLRKWLAVKMVCPLC 642
>AC024806-4|AAF59525.1| 192|Caenorhabditis elegans Hypothetical
protein Y52E8A.2 protein.
Length = 192
Score = 31.9 bits (69), Expect = 0.28
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +1
Query: 379 CPVCLERMDESVAGVLSVQCAHAFHADCLTRW--RDARCPVC 498
C +CL+ + + + C FH DC ++W + CP C
Sbjct: 138 CLICLDDVISTEKTIKCNSCRRRFHLDCASQWFKEKSVCPAC 179
>U80442-6|AAB37669.1| 294|Caenorhabditis elegans Hypothetical
protein T20F5.7 protein.
Length = 294
Score = 31.5 bits (68), Expect = 0.37
Identities = 15/52 (28%), Positives = 20/52 (38%), Gaps = 7/52 (13%)
Frame = +1
Query: 367 ELPTCPVCLERMDESVAGVLSVQCAHAFHADCLTRWRD-------ARCPVCR 501
+L TC +C+ D + C H +C RD RCP CR
Sbjct: 11 DLVTCLICIREFDTKTRKPKVLHCGHTVCEECTDNLRDFNAPLLVVRCPTCR 62
>AF083226-1|AAD03684.1| 560|Caenorhabditis elegans nuclear receptor
NHR-8 protein.
Length = 560
Score = 30.7 bits (66), Expect = 0.65
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +1
Query: 334 ARNGTAPPSHTELPTCPVCLERMDESVAGVLSVQCAHAFHADCLTRWRDARCP 492
+R PP C VC +R + GVL+ + AF ++ ++ +CP
Sbjct: 11 SRRSAVPPKEPAGRICTVCSDRANGYNFGVLTCESCKAFFRRNASKHKEIKCP 63
>AF036702-12|AAP31437.1| 559|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 8, isoform b protein.
Length = 559
Score = 30.7 bits (66), Expect = 0.65
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +1
Query: 334 ARNGTAPPSHTELPTCPVCLERMDESVAGVLSVQCAHAFHADCLTRWRDARCP 492
+R PP C VC +R + GVL+ + AF ++ ++ +CP
Sbjct: 11 SRRSAVPPKEPAGRICTVCSDRANGYNFGVLTCESCKAFFRRNASKHKEIKCP 63
>AF036702-11|AAP31436.1| 560|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 8, isoform a protein.
Length = 560
Score = 30.7 bits (66), Expect = 0.65
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +1
Query: 334 ARNGTAPPSHTELPTCPVCLERMDESVAGVLSVQCAHAFHADCLTRWRDARCP 492
+R PP C VC +R + GVL+ + AF ++ ++ +CP
Sbjct: 11 SRRSAVPPKEPAGRICTVCSDRANGYNFGVLTCESCKAFFRRNASKHKEIKCP 63
>AC103567-8|AAL35729.1| 305|Caenorhabditis elegans Hypothetical
protein Y51F10.2 protein.
Length = 305
Score = 30.7 bits (66), Expect = 0.65
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 337 RNGTAPPSHTELPTCPVCLERMDESVAGVLSVQCAHAFHADCL 465
++ T ++ P+C +CLE DE +QCAH C+
Sbjct: 5 KSSTDVKTYISTPSCRICLEPFDEGQHLPKILQCAHTVCERCI 47
>Z73422-6|CAH04641.1| 316|Caenorhabditis elegans Hypothetical
protein B0564.11 protein.
Length = 316
Score = 29.9 bits (64), Expect = 1.1
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 436 CAHAFHADCLTRWRDARCPVCRCAQTPE 519
C H + CL W D C VC T E
Sbjct: 198 CGHVYCEQCLNSWNDKPCSVCLKPVTSE 225
>Z70757-5|CAA94801.1| 110|Caenorhabditis elegans Hypothetical
protein ZK287.5 protein.
Length = 110
Score = 29.9 bits (64), Expect = 1.1
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = +1
Query: 436 CAHAFHADCLTRWRDAR--CPV 495
C HAFH C++RW R CP+
Sbjct: 77 CNHAFHFHCISRWLKTRQVCPL 98
>Z46242-13|CAA86328.1| 135|Caenorhabditis elegans Hypothetical
protein F35G12.9 protein.
Length = 135
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 7/29 (24%)
Frame = +1
Query: 436 CAHAFHADCLTRW-------RDARCPVCR 501
C HAFH C+ +W A+CP+CR
Sbjct: 100 CRHAFHRHCIDKWIAAPTNQPRAQCPLCR 128
>Z35595-4|CAA84635.1| 170|Caenorhabditis elegans Hypothetical
protein C01G6.4 protein.
Length = 170
Score = 29.9 bits (64), Expect = 1.1
Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +1
Query: 379 CPVCLERMDESVAGVLSVQCAHAFHADCLTRW--RDARCPVC 498
C +C+ + + + C H+FH +C+ W + CP C
Sbjct: 95 CAICMIDFEPGER-IRFLPCMHSFHQECVDEWLMKSFTCPSC 135
>X89223-1|CAA61507.1| 582|Caenorhabditis elegans sli-1 protein.
Length = 582
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Frame = +1
Query: 364 TELPTCPVCLERMDESVAGVLSVQCAHAFHADCLTRWRDA-----RCPVCR 501
T C +C D++ + C H A CL W+D+ CP CR
Sbjct: 385 TTFELCKIC----DDNEKNIKIEPCGHLLCAKCLANWQDSDGGGNTCPFCR 431
>U97193-14|AAB52442.2| 381|Caenorhabditis elegans Ring finger
protein protein 1 protein.
Length = 381
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 6/47 (12%)
Frame = +1
Query: 379 CPVCLERMDESVAGVLSVQCAHAFHADCLTRWRD------ARCPVCR 501
C VC + +E+ S+ C H F +C+ ++ CP CR
Sbjct: 22 CQVCYQPFNETTKLARSLHCGHTFCTECIRNVQNYGNSPHLECPTCR 68
>U58730-5|AAK84546.1| 582|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform a protein.
Length = 582
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Frame = +1
Query: 364 TELPTCPVCLERMDESVAGVLSVQCAHAFHADCLTRWRDA-----RCPVCR 501
T C +C D++ + C H A CL W+D+ CP CR
Sbjct: 385 TTFELCKIC----DDNEKNIKIEPCGHLLCAKCLANWQDSDGGGNTCPFCR 431
>U58730-4|AAK84547.1| 565|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform b protein.
Length = 565
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Frame = +1
Query: 364 TELPTCPVCLERMDESVAGVLSVQCAHAFHADCLTRWRDA-----RCPVCR 501
T C +C D++ + C H A CL W+D+ CP CR
Sbjct: 368 TTFELCKIC----DDNEKNIKIEPCGHLLCAKCLANWQDSDGGGNTCPFCR 414
>U58730-3|AAT92069.1| 523|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform c protein.
Length = 523
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Frame = +1
Query: 364 TELPTCPVCLERMDESVAGVLSVQCAHAFHADCLTRWRDA-----RCPVCR 501
T C +C D++ + C H A CL W+D+ CP CR
Sbjct: 368 TTFELCKIC----DDNEKNIKIEPCGHLLCAKCLANWQDSDGGGNTCPFCR 414
>AB077287-1|BAB83695.1| 101|Caenorhabditis elegans RING-H2 finger
protein Rbx1 protein.
Length = 101
Score = 29.9 bits (64), Expect = 1.1
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = +1
Query: 436 CAHAFHADCLTRWRDAR--CPV 495
C HAFH C++RW R CP+
Sbjct: 68 CNHAFHFHCISRWLKTRQVCPL 89
>AL033514-11|CAA22083.2| 298|Caenorhabditis elegans Hypothetical
protein Y75B8A.10 protein.
Length = 298
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Frame = +1
Query: 430 VQCAHAFHADCL---TRWRDARCPVCRCAQT 513
++C+H F CL ++W CPVCR T
Sbjct: 186 LRCSHVFCETCLATASKWDFDGCPVCRAPDT 216
>Z99281-51|CAE18031.2| 281|Caenorhabditis elegans Hypothetical
protein Y57G11C.48 protein.
Length = 281
Score = 28.7 bits (61), Expect = 2.6
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +1
Query: 379 CPVCLERMDESVAGVLS-VQCAHAFHADCLTRWRDARCPVCRCAQT 513
C +C E E + + C H F CLT ++ CPV C T
Sbjct: 4 CRICNEETSEDDVQLREELNCHHTFCNLCLTVYQGTLCPVRFCEGT 49
>Z69384-3|CAA93418.1| 475|Caenorhabditis elegans Hypothetical
protein T11G6.3 protein.
Length = 475
Score = 28.7 bits (61), Expect = 2.6
Identities = 24/86 (27%), Positives = 30/86 (34%), Gaps = 2/86 (2%)
Frame = -1
Query: 384 RARRQLGVRRRCSSVPGPFDSRHPSHMAQGVWF*TTIRNSIECSMKFPGCITCTKCK*RH 205
R+ G S+V G D A G W +RN + F G + C
Sbjct: 382 RSEMLRGNAEALSTVTGIIDGTGSVGSAIGQWLIPLVRNWLGWDAIFYGFMIMVVCSALC 441
Query: 204 I--VIWRTVSENPHMRNVLLTSSSKC 133
I VIWR EN H + T C
Sbjct: 442 ISPVIWREWKENKHEKISQKTDDQTC 467
>U41026-2|AAM51523.1| 295|Caenorhabditis elegans Hypothetical
protein C28G1.6 protein.
Length = 295
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
Frame = +1
Query: 370 LPTCPVCLERMDESVAGVLSVQCAHAFHADCLTRW---RDARCPVCR 501
LPTC +C E ++ C H C ++ + +CP CR
Sbjct: 3 LPTCEICEESYRSESRIPKNLNCGHVICPVCASKLFENPEVKCPTCR 49
>U00048-10|AAB53823.2| 852|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 16 protein.
Length = 852
Score = 28.3 bits (60), Expect = 3.5
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +1
Query: 325 VEWARNGTAPPSHTELPTCPVCLERMDESVAGVLSVQCAHAFHADCLTRWRDARCP 492
+EW R + S + + LE +DE ++ L +Q H AD R +A+ P
Sbjct: 496 LEWVRRSISKVSKSNMKMDQPALEALDEKISAKL-LQFPHVSIADAARRAIEAKLP 550
>Z82280-5|CAB05266.1| 294|Caenorhabditis elegans Hypothetical
protein R05A10.5 protein.
Length = 294
Score = 27.9 bits (59), Expect = 4.6
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +3
Query: 117 CIRFVSICCCLSA--GHCACEGSQRRF-SRSLYGVTYISYK*CSP 242
C + I CLS+ G+CAC G+ R+ +L Y + K C P
Sbjct: 52 CGKLFQIRTCLSSELGNCACSGAPSRYIPCNLSACKYPAQKTCCP 96
>Z70681-2|CAA94578.2| 203|Caenorhabditis elegans Hypothetical
protein C30F2.2 protein.
Length = 203
Score = 27.5 bits (58), Expect = 6.1
Identities = 12/47 (25%), Positives = 21/47 (44%)
Frame = +1
Query: 361 HTELPTCPVCLERMDESVAGVLSVQCAHAFHADCLTRWRDARCPVCR 501
+ + CP CLE D++ C H+ C + + CP+C+
Sbjct: 4 NVDFSRCPTCLEDYDDNSHRPCVGFCGHSICLKCQS--KIVSCPLCK 48
>AC199170-5|ABO33263.1| 95|Caenorhabditis elegans Hypothetical
protein T08D2.4 protein.
Length = 95
Score = 27.5 bits (58), Expect = 6.1
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1
Query: 373 PTCPVCLERMDESVAGVLSVQCAHAFHADCLTR 471
PTC +C+E D + + C H+F C+ +
Sbjct: 24 PTCSICMEEFDANSHIPKVLICGHSFCIICIEK 56
>Z99710-11|CAB82211.1| 342|Caenorhabditis elegans Hypothetical
protein F08A8.7 protein.
Length = 342
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/65 (24%), Positives = 27/65 (41%)
Frame = -3
Query: 292 LVLDYYKELHRMLHEIPGLHHLYEM*VTPYSDLENRL*EPSHAQCPADKQQQMLTNLMHL 113
L +D + E HR + G Y PY ++ N EP H D+++ + +
Sbjct: 69 LDIDIFIEGHRYTIVLNGKSFRYRYRFVPYDEISNARNEPFHPVVADDERRTIYNKGLQF 128
Query: 112 ELQAL 98
L+ L
Sbjct: 129 ALRKL 133
>Z99709-14|CAB76414.1| 342|Caenorhabditis elegans Hypothetical
protein F08A8.7 protein.
Length = 342
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/65 (24%), Positives = 27/65 (41%)
Frame = -3
Query: 292 LVLDYYKELHRMLHEIPGLHHLYEM*VTPYSDLENRL*EPSHAQCPADKQQQMLTNLMHL 113
L +D + E HR + G Y PY ++ N EP H D+++ + +
Sbjct: 69 LDIDIFIEGHRYTIVLNGKSFRYRYRFVPYDEISNARNEPFHPVVADDERRTIYNKGLQF 128
Query: 112 ELQAL 98
L+ L
Sbjct: 129 ALRKL 133
>Z92773-1|CAB07131.1| 395|Caenorhabditis elegans Hypothetical
protein W08E3.3 protein.
Length = 395
Score = 27.1 bits (57), Expect = 8.0
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -3
Query: 349 QFRSWPIRLATPKPYGTGRLVLDYYK 272
+ ++W I++ TP P GR+ D+ K
Sbjct: 312 EVKAWTIQVGTPAPKAAGRIHTDFEK 337
>Z46787-5|CAA86743.1| 409|Caenorhabditis elegans Hypothetical
protein C16C10.5 protein.
Length = 409
Score = 27.1 bits (57), Expect = 8.0
Identities = 26/105 (24%), Positives = 37/105 (35%), Gaps = 24/105 (22%)
Frame = +1
Query: 259 FDGVPYSSLEPNA--LCHMAWVSRVEWARNGTAPPSHTELPTCPVCLERMDESV------ 414
F GV Y L + +C SR+ + P H E C VC R+D+S
Sbjct: 254 FYGVYYGVLGRDFAHICTARMASRIGYYTPEGLPKKHLEDGVCAVCGGRLDDSEHVHDAD 313
Query: 415 ------------AGVLSVQCAHAFHADCLTRW----RDARCPVCR 501
+ + C H FH C+ W + CP C+
Sbjct: 314 AVVTTKMVEDEDEKLYKLSCGHVFHEFCIRGWVVVGKLQTCPYCK 358
>AL022271-1|CAA18349.1| 919|Caenorhabditis elegans Hypothetical
protein F32F2.1 protein.
Length = 919
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 286 EPNALCHMAWVSRVEWARNGTAPPSHTE 369
EPN+ M+ SR + ARN PP H +
Sbjct: 687 EPNSAAVMSSRSRYQQARNRRLPPRHNQ 714
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,508,068
Number of Sequences: 27780
Number of extensions: 251749
Number of successful extensions: 745
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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