Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_F02
         (146 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    19   3.4  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    19   4.5  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    19   4.5  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    19   6.0  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    19   6.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    19   6.0  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 19.4 bits (38), Expect = 3.4
 Identities = 8/15 (53%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
 Frame = +3

Query: 12  GFPRHSLLP-DTPLG 53
           G+P+H L+P  TP G
Sbjct: 581 GWPQHMLIPKGTPEG 595


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 19.0 bits (37), Expect = 4.5
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +3

Query: 12  GFPRHSLLP 38
           G+P+H LLP
Sbjct: 580 GWPQHMLLP 588


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory
          receptor candidate 49 protein.
          Length = 418

 Score = 19.0 bits (37), Expect = 4.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 18 PRHSLLPDTPLGRQVLAAL 74
          P+  LLP TPL   +L  L
Sbjct: 43 PKMPLLPKTPLPLTLLYKL 61



 Score = 19.0 bits (37), Expect = 4.5
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -1

Query: 101 QQPLLPRTP 75
           + PLLP+TP
Sbjct: 44  KMPLLPKTP 52


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 5/16 (31%), Positives = 8/16 (50%)
 Frame = -1

Query: 53  PEWRVRQQRMPRKPDP 6
           P W +    + R+ DP
Sbjct: 354 PVWEIVMNELDRRDDP 369


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 5/16 (31%), Positives = 8/16 (50%)
 Frame = -1

Query: 53  PEWRVRQQRMPRKPDP 6
           P W +    + R+ DP
Sbjct: 361 PVWEIVMNELDRRDDP 376


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory
          receptor candidate 14 protein.
          Length = 374

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = -1

Query: 95 PLLPRTP 75
          PLLP+TP
Sbjct: 2  PLLPKTP 8


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,743
Number of Sequences: 336
Number of extensions: 371
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 29
effective length of database: 112,841
effective search space used:  2143979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)