Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_F01
(514 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC043277-1|AAH43277.1| 839|Homo sapiens SYNJ2 protein protein. 34 0.25
AY152396-1|AAN73051.1| 1288|Homo sapiens synaptojanin 2A protein. 34 0.25
AL139330-4|CAI12983.1| 1496|Homo sapiens synaptojanin 2 protein. 34 0.25
AF318616-1|AAG46036.1| 1496|Homo sapiens synaptojanin 2 protein. 34 0.25
AF039945-1|AAD02178.1| 1443|Homo sapiens synaptojanin 2B protein. 34 0.25
AB002346-1|BAA20805.2| 1443|Homo sapiens KIAA0348 protein protein. 34 0.25
AM279490-1|CAK50609.1| 117|Homo sapiens immunoglobulin A heavy ... 33 0.59
DQ232881-1|ABB18374.1| 868|Homo sapiens LIN41 protein. 31 2.4
EF088216-1|ABK41888.1| 687|Homo sapiens polyA specific ribonucl... 31 3.1
BC128180-1|AAI28181.1| 687|Homo sapiens PAN3 polyA specific rib... 31 3.1
BC128179-1|AAI28180.1| 553|Homo sapiens PAN3 protein protein. 31 3.1
BC113426-1|AAI13427.1| 617|Homo sapiens zinc finger protein 221... 31 3.1
BC111981-1|AAI11982.1| 617|Homo sapiens zinc finger protein 221... 31 3.1
BC024318-1|AAH24318.1| 442|Homo sapiens PAN3 protein protein. 31 3.1
AL356915-4|CAI12450.2| 741|Homo sapiens PAN3 polyA specific rib... 31 3.1
AL356915-3|CAI12449.2| 687|Homo sapiens PAN3 polyA specific rib... 31 3.1
AL138712-3|CAM20921.1| 741|Homo sapiens PAN3 polyA specific rib... 31 3.1
AL138712-2|CAI14848.1| 687|Homo sapiens PAN3 polyA specific rib... 31 3.1
AK131556-1|BAD18690.1| 472|Homo sapiens protein ( Homo sapiens ... 31 3.1
AK091307-1|BAC03632.1| 126|Homo sapiens protein ( Homo sapiens ... 31 3.1
AF187987-1|AAF04103.1| 617|Homo sapiens zinc finger protein ZNF... 31 3.1
AC035150-2|AAF63029.1| 617|Homo sapiens Zinc finger protein ZNF... 31 3.1
AB109552-1|BAD93184.1| 741|Homo sapiens PABP1-DEPENDENT POLY(A)... 31 3.1
AB107584-1|BAD02262.1| 687|Homo sapiens PABP1-DEPENDENT POLY(A)... 31 3.1
Y00057-1|CAA68266.1| 761|Homo sapiens protein ( Human mRNA for ... 30 5.5
X64072-1|CAA45427.1| 769|Homo sapiens integrin beta-2 subunit p... 30 5.5
M15395-1|AAA59490.1| 769|Homo sapiens LYAM1 protein. 30 5.5
BC021077-1|AAH21077.1| 758|Homo sapiens ITGB2 protein protein. 30 5.5
BC005861-1|AAH05861.1| 769|Homo sapiens ITGB2 protein protein. 30 5.5
AL163300-3|CAB90553.1| 769|Homo sapiens cell surface adhesion g... 30 5.5
AK222505-1|BAD96225.1| 769|Homo sapiens integrin beta chain, be... 30 5.5
AF016894-1|AAL14027.1| 56|Homo sapiens integrin beta 2 protein. 30 5.5
AB208909-1|BAD92146.1| 475|Homo sapiens integrin beta chain, be... 30 5.5
BX640905-1|CAE45950.1| 1706|Homo sapiens hypothetical protein pr... 29 9.5
AY137776-1|AAN11306.1| 1706|Homo sapiens DNA strand-exchange pro... 29 9.5
AL133623-1|CAB63749.1| 1159|Homo sapiens hypothetical protein pr... 29 9.5
>BC043277-1|AAH43277.1| 839|Homo sapiens SYNJ2 protein protein.
Length = 839
Score = 34.3 bits (75), Expect = 0.25
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +1
Query: 313 FSFVVHGDQQDVFYFVKEDTWR--AADDKQQLKRMQGKLNVTFHE 441
F++ + ++VFYFVK W+ D+ QL++ GK+ FHE
Sbjct: 70 FNYRIDLTYEEVFYFVKRQDWKKLLEFDQLQLQKSSGKIFKDFHE 114
>AY152396-1|AAN73051.1| 1288|Homo sapiens synaptojanin 2A protein.
Length = 1288
Score = 34.3 bits (75), Expect = 0.25
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +1
Query: 313 FSFVVHGDQQDVFYFVKEDTWR--AADDKQQLKRMQGKLNVTFHE 441
F++ + ++VFYFVK W+ D+ QL++ GK+ FHE
Sbjct: 727 FNYRIDLTYEEVFYFVKRQDWKKLLEFDQLQLQKSSGKIFKDFHE 771
>AL139330-4|CAI12983.1| 1496|Homo sapiens synaptojanin 2 protein.
Length = 1496
Score = 34.3 bits (75), Expect = 0.25
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +1
Query: 313 FSFVVHGDQQDVFYFVKEDTWR--AADDKQQLKRMQGKLNVTFHE 441
F++ + ++VFYFVK W+ D+ QL++ GK+ FHE
Sbjct: 727 FNYRIDLTYEEVFYFVKRQDWKKLLEFDQLQLQKSSGKIFKDFHE 771
>AF318616-1|AAG46036.1| 1496|Homo sapiens synaptojanin 2 protein.
Length = 1496
Score = 34.3 bits (75), Expect = 0.25
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +1
Query: 313 FSFVVHGDQQDVFYFVKEDTWR--AADDKQQLKRMQGKLNVTFHE 441
F++ + ++VFYFVK W+ D+ QL++ GK+ FHE
Sbjct: 727 FNYRIDLTYEEVFYFVKRQDWKKLLEFDQLQLQKSSGKIFKDFHE 771
>AF039945-1|AAD02178.1| 1443|Homo sapiens synaptojanin 2B protein.
Length = 1443
Score = 34.3 bits (75), Expect = 0.25
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +1
Query: 313 FSFVVHGDQQDVFYFVKEDTWR--AADDKQQLKRMQGKLNVTFHE 441
F++ + ++VFYFVK W+ D+ QL++ GK+ FHE
Sbjct: 674 FNYRIDLTYEEVFYFVKRQDWKKLLEFDQLQLQKSSGKIFKDFHE 718
>AB002346-1|BAA20805.2| 1443|Homo sapiens KIAA0348 protein protein.
Length = 1443
Score = 34.3 bits (75), Expect = 0.25
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +1
Query: 313 FSFVVHGDQQDVFYFVKEDTWR--AADDKQQLKRMQGKLNVTFHE 441
F++ + ++VFYFVK W+ D+ QL++ GK+ FHE
Sbjct: 674 FNYRIDLTYEEVFYFVKRQDWKKLLEFDQLQLQKSSGKIFKDFHE 718
>AM279490-1|CAK50609.1| 117|Homo sapiens immunoglobulin A heavy
chain variable region protein.
Length = 117
Score = 33.1 bits (72), Expect = 0.59
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Frame = +1
Query: 199 ILVSRNSRGRAVVTAVPSANAIYRDVY------TSVFNRSHLLPF-SFVVHGDQQDVFYF 357
++ S +GRA +TA S N +Y ++ T+VF + +LP+ S V +D +YF
Sbjct: 43 VIYSERVQGRATITADASTNTVYMEIRNLRSDDTAVFYCAGMLPYCSRSVCSSLKD-YYF 101
Query: 358 VKEDTW 375
+ D W
Sbjct: 102 FRMDVW 107
>DQ232881-1|ABB18374.1| 868|Homo sapiens LIN41 protein.
Length = 868
Score = 31.1 bits (67), Expect = 2.4
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -3
Query: 203 RIPRPNGGSESEPIRFGAKLLSESDFNADIVGMERLLKSAILLLDM 66
R+P GG+ EP++ + + A+ GM+ L SA LL ++
Sbjct: 74 RLPAAGGGAAGEPLKLRCPVCDQKVVLAEAAGMDALPSSAFLLSNL 119
>EF088216-1|ABK41888.1| 687|Homo sapiens polyA specific
ribonuclease subunit homolog protein.
Length = 687
Score = 30.7 bits (66), Expect = 3.1
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 355 FVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGRSYADV 474
F K+ TW D+ LK + L FH+VTE+G + D+
Sbjct: 596 FQKDPTWSETGDRYLLKLFRDHL---FHQVTEAGAPWIDL 632
>BC128180-1|AAI28181.1| 687|Homo sapiens PAN3 polyA specific
ribonuclease subunit homolog (S. cerevisiae) protein.
Length = 687
Score = 30.7 bits (66), Expect = 3.1
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 355 FVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGRSYADV 474
F K+ TW D+ LK + L FH+VTE+G + D+
Sbjct: 596 FQKDPTWSETGDRYLLKLFRDHL---FHQVTEAGAPWIDL 632
>BC128179-1|AAI28180.1| 553|Homo sapiens PAN3 protein protein.
Length = 553
Score = 30.7 bits (66), Expect = 3.1
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 355 FVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGRSYADV 474
F K+ TW D+ LK + L FH+VTE+G + D+
Sbjct: 462 FQKDPTWSETGDRYLLKLFRDHL---FHQVTEAGAPWIDL 498
>BC113426-1|AAI13427.1| 617|Homo sapiens zinc finger protein 221
protein.
Length = 617
Score = 30.7 bits (66), Expect = 3.1
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 247 PSANAIYRDVYTSVFNRSHLLPFSFVVHGDQQDVFYFV-KEDTWRAADDKQQLKRMQGKL 423
P+ +YRDV F R+ L + H QD F+F+ KE W+ Q+ GK+
Sbjct: 49 PAQRKLYRDVMLENF-RNLLSVGNQPFH---QDTFHFLGKEKFWKMKTTSQREGNSGGKI 104
Query: 424 NVTFHEVTESG 456
+ V E+G
Sbjct: 105 QIEMETVPEAG 115
>BC111981-1|AAI11982.1| 617|Homo sapiens zinc finger protein 221
protein.
Length = 617
Score = 30.7 bits (66), Expect = 3.1
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 247 PSANAIYRDVYTSVFNRSHLLPFSFVVHGDQQDVFYFV-KEDTWRAADDKQQLKRMQGKL 423
P+ +YRDV F R+ L + H QD F+F+ KE W+ Q+ GK+
Sbjct: 49 PAQRKLYRDVMLENF-RNLLSVGNQPFH---QDTFHFLGKEKFWKMKTTSQREGNSGGKI 104
Query: 424 NVTFHEVTESG 456
+ V E+G
Sbjct: 105 QIEMETVPEAG 115
>BC024318-1|AAH24318.1| 442|Homo sapiens PAN3 protein protein.
Length = 442
Score = 30.7 bits (66), Expect = 3.1
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 355 FVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGRSYADV 474
F K+ TW D+ LK + L FH+VTE+G + D+
Sbjct: 351 FQKDPTWSETGDRYLLKLFRDHL---FHQVTEAGAPWIDL 387
>AL356915-4|CAI12450.2| 741|Homo sapiens PAN3 polyA specific
ribonuclease subunit homolog (S. cerevisiae) protein.
Length = 741
Score = 30.7 bits (66), Expect = 3.1
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 355 FVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGRSYADV 474
F K+ TW D+ LK + L FH+VTE+G + D+
Sbjct: 650 FQKDPTWSETGDRYLLKLFRDHL---FHQVTEAGAPWIDL 686
>AL356915-3|CAI12449.2| 687|Homo sapiens PAN3 polyA specific
ribonuclease subunit homolog (S. cerevisiae) protein.
Length = 687
Score = 30.7 bits (66), Expect = 3.1
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 355 FVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGRSYADV 474
F K+ TW D+ LK + L FH+VTE+G + D+
Sbjct: 596 FQKDPTWSETGDRYLLKLFRDHL---FHQVTEAGAPWIDL 632
>AL138712-3|CAM20921.1| 741|Homo sapiens PAN3 polyA specific
ribonuclease subunit homolog (S. cerevisiae) protein.
Length = 741
Score = 30.7 bits (66), Expect = 3.1
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 355 FVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGRSYADV 474
F K+ TW D+ LK + L FH+VTE+G + D+
Sbjct: 650 FQKDPTWSETGDRYLLKLFRDHL---FHQVTEAGAPWIDL 686
>AL138712-2|CAI14848.1| 687|Homo sapiens PAN3 polyA specific
ribonuclease subunit homolog (S. cerevisiae) protein.
Length = 687
Score = 30.7 bits (66), Expect = 3.1
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 355 FVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGRSYADV 474
F K+ TW D+ LK + L FH+VTE+G + D+
Sbjct: 596 FQKDPTWSETGDRYLLKLFRDHL---FHQVTEAGAPWIDL 632
>AK131556-1|BAD18690.1| 472|Homo sapiens protein ( Homo sapiens
cDNA FLJ16798 fis, clone TESTI2053667, weakly similar
to PAB-dependent poly(A)-specific ribonuclease subunit
PAN3 (EC 3.1.13.4). ).
Length = 472
Score = 30.7 bits (66), Expect = 3.1
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 355 FVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGRSYADV 474
F K+ TW D+ LK + L FH+VTE+G + D+
Sbjct: 381 FQKDPTWSETGDRYLLKLFRDHL---FHQVTEAGAPWIDL 417
>AK091307-1|BAC03632.1| 126|Homo sapiens protein ( Homo sapiens
cDNA FLJ33988 fis, clone DFNES2006346, weakly similar to
PAB-DEPENDENT POLY(A)-SPECIFIC RIBONUCLEASE SUBUNIT PAN3
(EC ).
Length = 126
Score = 30.7 bits (66), Expect = 3.1
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 355 FVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGRSYADV 474
F K+ TW D+ LK + L FH+VTE+G + D+
Sbjct: 35 FQKDPTWSETGDRYLLKLFRDHL---FHQVTEAGAPWIDL 71
>AF187987-1|AAF04103.1| 617|Homo sapiens zinc finger protein ZNF221
protein.
Length = 617
Score = 30.7 bits (66), Expect = 3.1
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 247 PSANAIYRDVYTSVFNRSHLLPFSFVVHGDQQDVFYFV-KEDTWRAADDKQQLKRMQGKL 423
P+ +YRDV F R+ L + H QD F+F+ KE W+ Q+ GK+
Sbjct: 49 PAQRKLYRDVMLENF-RNLLSVGNQPFH---QDTFHFLGKEKFWKMKTTSQREGNSGGKI 104
Query: 424 NVTFHEVTESG 456
+ V E+G
Sbjct: 105 QIEMETVPEAG 115
>AC035150-2|AAF63029.1| 617|Homo sapiens Zinc finger protein ZNF221
protein.
Length = 617
Score = 30.7 bits (66), Expect = 3.1
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 247 PSANAIYRDVYTSVFNRSHLLPFSFVVHGDQQDVFYFV-KEDTWRAADDKQQLKRMQGKL 423
P+ +YRDV F R+ L + H QD F+F+ KE W+ Q+ GK+
Sbjct: 49 PAQRKLYRDVMLENF-RNLLSVGNQPFH---QDTFHFLGKEKFWKMKTTSQREGNSGGKI 104
Query: 424 NVTFHEVTESG 456
+ V E+G
Sbjct: 105 QIEMETVPEAG 115
>AB109552-1|BAD93184.1| 741|Homo sapiens PABP1-DEPENDENT
POLY(A)-SPECIFIC RIBONUCLEASE SUBUNIT PAN3b protein.
Length = 741
Score = 30.7 bits (66), Expect = 3.1
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 355 FVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGRSYADV 474
F K+ TW D+ LK + L FH+VTE+G + D+
Sbjct: 650 FQKDPTWSETGDRYLLKLFRDHL---FHQVTEAGAPWIDL 686
>AB107584-1|BAD02262.1| 687|Homo sapiens PABP1-DEPENDENT
POLY(A)-SPECIFIC RIBONUCLEASE SUBUNIT PAN3 protein.
Length = 687
Score = 30.7 bits (66), Expect = 3.1
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 355 FVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGRSYADV 474
F K+ TW D+ LK + L FH+VTE+G + D+
Sbjct: 596 FQKDPTWSETGDRYLLKLFRDHL---FHQVTEAGAPWIDL 632
>Y00057-1|CAA68266.1| 761|Homo sapiens protein ( Human mRNA for
beta-subunit of cell surface adhesion glycoproteins
LFA-1, CR3 and p150,95. ).
Length = 761
Score = 29.9 bits (64), Expect = 5.5
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +1
Query: 352 YFVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGR 459
Y++ + ++ DD + +K++ G L +E+TESGR
Sbjct: 122 YYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGR 157
>X64072-1|CAA45427.1| 769|Homo sapiens integrin beta-2 subunit
protein.
Length = 769
Score = 29.9 bits (64), Expect = 5.5
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +1
Query: 352 YFVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGR 459
Y++ + ++ DD + +K++ G L +E+TESGR
Sbjct: 130 YYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGR 165
>M15395-1|AAA59490.1| 769|Homo sapiens LYAM1 protein.
Length = 769
Score = 29.9 bits (64), Expect = 5.5
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +1
Query: 352 YFVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGR 459
Y++ + ++ DD + +K++ G L +E+TESGR
Sbjct: 130 YYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGR 165
>BC021077-1|AAH21077.1| 758|Homo sapiens ITGB2 protein protein.
Length = 758
Score = 29.9 bits (64), Expect = 5.5
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +1
Query: 352 YFVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGR 459
Y++ + ++ DD + +K++ G L +E+TESGR
Sbjct: 119 YYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGR 154
>BC005861-1|AAH05861.1| 769|Homo sapiens ITGB2 protein protein.
Length = 769
Score = 29.9 bits (64), Expect = 5.5
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +1
Query: 352 YFVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGR 459
Y++ + ++ DD + +K++ G L +E+TESGR
Sbjct: 130 YYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGR 165
>AL163300-3|CAB90553.1| 769|Homo sapiens cell surface adhesion
glycoprotein (LFA-1/CR3/P150,959 beta subunit precursor)
protein.
Length = 769
Score = 29.9 bits (64), Expect = 5.5
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +1
Query: 352 YFVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGR 459
Y++ + ++ DD + +K++ G L +E+TESGR
Sbjct: 130 YYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGR 165
>AK222505-1|BAD96225.1| 769|Homo sapiens integrin beta chain, beta
2 precursor variant protein.
Length = 769
Score = 29.9 bits (64), Expect = 5.5
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +1
Query: 352 YFVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGR 459
Y++ + ++ DD + +K++ G L +E+TESGR
Sbjct: 130 YYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGR 165
>AF016894-1|AAL14027.1| 56|Homo sapiens integrin beta 2 protein.
Length = 56
Score = 29.9 bits (64), Expect = 5.5
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +1
Query: 352 YFVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGR 459
Y++ + ++ DD + +K++ G L +E+TESGR
Sbjct: 20 YYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGR 55
>AB208909-1|BAD92146.1| 475|Homo sapiens integrin beta chain, beta
2 precursor variant protein.
Length = 475
Score = 29.9 bits (64), Expect = 5.5
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +1
Query: 352 YFVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGR 459
Y++ + ++ DD + +K++ G L +E+TESGR
Sbjct: 175 YYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGR 210
>BX640905-1|CAE45950.1| 1706|Homo sapiens hypothetical protein
protein.
Length = 1706
Score = 29.1 bits (62), Expect = 9.5
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +1
Query: 313 FSFVVHGDQQDVFYFVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGRSYADVKI 480
FS++ Q+DVFY ++D W ++ K + + H V+ RS D++I
Sbjct: 998 FSYIAKNSQEDVFY--EDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQI 1051
>AY137776-1|AAN11306.1| 1706|Homo sapiens DNA strand-exchange protein
SEP1 protein.
Length = 1706
Score = 29.1 bits (62), Expect = 9.5
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +1
Query: 313 FSFVVHGDQQDVFYFVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGRSYADVKI 480
FS++ Q+DVFY ++D W ++ K + + H V+ RS D++I
Sbjct: 998 FSYIAKNSQEDVFY--EDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQI 1051
>AL133623-1|CAB63749.1| 1159|Homo sapiens hypothetical protein
protein.
Length = 1159
Score = 29.1 bits (62), Expect = 9.5
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +1
Query: 313 FSFVVHGDQQDVFYFVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGRSYADVKI 480
FS++ Q+DVFY ++D W ++ K + + H V+ RS D++I
Sbjct: 463 FSYIAKNSQEDVFY--EDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQI 516
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,876,048
Number of Sequences: 237096
Number of extensions: 1355502
Number of successful extensions: 7102
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 6925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7095
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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