Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_E23
(365 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39647-7|AAP31441.1| 544|Caenorhabditis elegans Twik family of ... 30 0.58
U39647-5|AAM51531.1| 576|Caenorhabditis elegans Twik family of ... 30 0.58
U39647-4|AAM51532.1| 562|Caenorhabditis elegans Twik family of ... 30 0.58
AF083651-1|AAC32862.1| 562|Caenorhabditis elegans putative pota... 30 0.58
AF083648-1|AAC32859.1| 544|Caenorhabditis elegans putative pota... 30 0.58
AF083647-1|AAC32858.1| 576|Caenorhabditis elegans putative pota... 30 0.58
AF068709-7|AAO26014.1| 317|Caenorhabditis elegans Serpentine re... 30 0.58
Z73102-12|CAA97406.1| 430|Caenorhabditis elegans Hypothetical p... 29 1.0
AF068709-8|AAO26015.1| 315|Caenorhabditis elegans Serpentine re... 29 1.0
AF016440-6|AAN84798.1| 525|Caenorhabditis elegans Hypothetical ... 29 1.0
AF016440-5|AAB65904.2| 535|Caenorhabditis elegans Hypothetical ... 29 1.0
U49830-10|AAL16312.1| 463|Caenorhabditis elegans Hypothetical p... 28 2.4
Z46794-12|CAA86778.2| 1468|Caenorhabditis elegans Hypothetical p... 27 3.1
Z46794-11|CAA86785.2| 1470|Caenorhabditis elegans Hypothetical p... 27 3.1
AF039038-9|AAO12408.1| 559|Caenorhabditis elegans Hypothetical ... 27 3.1
AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical ... 27 3.1
AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical ... 27 3.1
Z92789-8|CAB07222.3| 495|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z68336-9|CAA92741.3| 495|Caenorhabditis elegans Hypothetical pr... 27 4.1
U88180-6|AAB42300.1| 373|Caenorhabditis elegans Hypothetical pr... 27 4.1
AC017117-3|AAF16619.1| 339|Caenorhabditis elegans Hypothetical ... 27 4.1
AC006720-7|AAF60444.1| 511|Caenorhabditis elegans Cytochrome p4... 27 4.1
U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical pr... 27 5.4
AC084158-10|AAK68568.1| 87|Caenorhabditis elegans Hypothetical... 27 5.4
Z81499-2|CAB04088.1| 598|Caenorhabditis elegans Hypothetical pr... 26 7.2
U29244-12|AAC71093.3| 604|Caenorhabditis elegans Hypothetical p... 26 7.2
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 26 7.2
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 26 7.2
AY494976-1|AAR87493.1| 598|Caenorhabditis elegans UNC-122 protein. 26 7.2
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 26 7.2
AC024791-30|AAL32250.2| 2460|Caenorhabditis elegans Hypothetical... 26 7.2
>U39647-7|AAP31441.1| 544|Caenorhabditis elegans Twik family of
potassium channelsprotein 17, isoform e protein.
Length = 544
Score = 29.9 bits (64), Expect = 0.58
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 2 HEARPGSRPGSRAGSKPPS-RHGSNLSLDST 91
H +P SRP SR SKPPS R+ + LS +T
Sbjct: 57 HYRKPPSRPPSRPPSKPPSNRNSAALSRHNT 87
>U39647-5|AAM51531.1| 576|Caenorhabditis elegans Twik family of
potassium channelsprotein 17, isoform c protein.
Length = 576
Score = 29.9 bits (64), Expect = 0.58
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 2 HEARPGSRPGSRAGSKPPS-RHGSNLSLDST 91
H +P SRP SR SKPPS R+ + LS +T
Sbjct: 57 HYRKPPSRPPSRPPSKPPSNRNSAALSRHNT 87
>U39647-4|AAM51532.1| 562|Caenorhabditis elegans Twik family of
potassium channelsprotein 17, isoform d protein.
Length = 562
Score = 29.9 bits (64), Expect = 0.58
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 2 HEARPGSRPGSRAGSKPPS-RHGSNLSLDST 91
H +P SRP SR SKPPS R+ + LS +T
Sbjct: 57 HYRKPPSRPPSRPPSKPPSNRNSAALSRHNT 87
>AF083651-1|AAC32862.1| 562|Caenorhabditis elegans putative
potassium channel subunitn2P17m2-1 protein.
Length = 562
Score = 29.9 bits (64), Expect = 0.58
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 2 HEARPGSRPGSRAGSKPPS-RHGSNLSLDST 91
H +P SRP SR SKPPS R+ + LS +T
Sbjct: 57 HYRKPPSRPPSRPPSKPPSNRNSAALSRHNT 87
>AF083648-1|AAC32859.1| 544|Caenorhabditis elegans putative
potassium channel subunitn2P17m2-3 protein.
Length = 544
Score = 29.9 bits (64), Expect = 0.58
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 2 HEARPGSRPGSRAGSKPPS-RHGSNLSLDST 91
H +P SRP SR SKPPS R+ + LS +T
Sbjct: 57 HYRKPPSRPPSRPPSKPPSNRNSAALSRHNT 87
>AF083647-1|AAC32858.1| 576|Caenorhabditis elegans putative
potassium channel subunitn2P17m2-2 protein.
Length = 576
Score = 29.9 bits (64), Expect = 0.58
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 2 HEARPGSRPGSRAGSKPPS-RHGSNLSLDST 91
H +P SRP SR SKPPS R+ + LS +T
Sbjct: 57 HYRKPPSRPPSRPPSKPPSNRNSAALSRHNT 87
>AF068709-7|AAO26014.1| 317|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 60 protein.
Length = 317
Score = 29.9 bits (64), Expect = 0.58
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -3
Query: 348 LLRLQLVWCSLMTGIRLFPGVCPSAEANDPLLP 250
L RL L++C L TGI ++ V S ++N P LP
Sbjct: 229 LTRLALIYCFLYTGILMW-SVITSIDSNFPFLP 260
>Z73102-12|CAA97406.1| 430|Caenorhabditis elegans Hypothetical
protein B0035.11 protein.
Length = 430
Score = 29.1 bits (62), Expect = 1.0
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2
Query: 200 NGGSSRPRTPTGLLTPSGRSGSFASAEGQTPGKSR 304
N +S P TP TPS R S S + Q P K R
Sbjct: 7 NSDASAPGTPVKSSTPSSRGSSPDSPKKQEPSKKR 41
>AF068709-8|AAO26015.1| 315|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 59 protein.
Length = 315
Score = 29.1 bits (62), Expect = 1.0
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -3
Query: 348 LLRLQLVWCSLMTGIRLFPGVCPSAEANDPLLP 250
L RL LV+C L TGI L+ V S +++ P LP
Sbjct: 229 LTRLALVYCFLYTGILLW-SVIASIDSSFPFLP 260
>AF016440-6|AAN84798.1| 525|Caenorhabditis elegans Hypothetical
protein F29G9.2b protein.
Length = 525
Score = 29.1 bits (62), Expect = 1.0
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 224 TPTGLLTPSGRSGSFASAEGQTPGKSRIPVIKEHHTNCNLNRQRTPS 364
TP+ + + S S S+AS+ QTP +S PVI+ + N TPS
Sbjct: 29 TPSSIGSSSSSSSSYASSTKQTPPRS--PVIRYPTVVVSKNSIATPS 73
>AF016440-5|AAB65904.2| 535|Caenorhabditis elegans Hypothetical
protein F29G9.2a protein.
Length = 535
Score = 29.1 bits (62), Expect = 1.0
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 224 TPTGLLTPSGRSGSFASAEGQTPGKSRIPVIKEHHTNCNLNRQRTPS 364
TP+ + + S S S+AS+ QTP +S PVI+ + N TPS
Sbjct: 39 TPSSIGSSSSSSSSYASSTKQTPPRS--PVIRYPTVVVSKNSIATPS 83
>U49830-10|AAL16312.1| 463|Caenorhabditis elegans Hypothetical
protein C33F10.8 protein.
Length = 463
Score = 27.9 bits (59), Expect = 2.4
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = -2
Query: 199 GCREAKLTSICSGSC--RRCTRICHFPHW 119
GC+E K + RR R+ H+PHW
Sbjct: 289 GCKEYKFELVVQADNEERRSVRLYHYPHW 317
>Z46794-12|CAA86778.2| 1468|Caenorhabditis elegans Hypothetical
protein R06F6.8a protein.
Length = 1468
Score = 27.5 bits (58), Expect = 3.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 132 TFLIGMRDGVPASSVLSRDRFDPCLEGGF 46
T +I + D +P V SRD F CL+ GF
Sbjct: 139 TIIINLAD-IPTCCVPSRDEFLVCLQNGF 166
>Z46794-11|CAA86785.2| 1470|Caenorhabditis elegans Hypothetical
protein R06F6.8b protein.
Length = 1470
Score = 27.5 bits (58), Expect = 3.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 132 TFLIGMRDGVPASSVLSRDRFDPCLEGGF 46
T +I + D +P V SRD F CL+ GF
Sbjct: 139 TIIINLAD-IPTCCVPSRDEFLVCLQNGF 166
>AF039038-9|AAO12408.1| 559|Caenorhabditis elegans Hypothetical
protein K06A5.8d protein.
Length = 559
Score = 27.5 bits (58), Expect = 3.1
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -3
Query: 321 SLMTGIRLFPGVCPSAEANDPLLPLGVRSPVGVRG 217
+LMT RLF + + N+ +LP GV VG G
Sbjct: 230 NLMTQSRLFQQFSAAKQINEMVLPRGVGGVVGAAG 264
>AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical
protein K06A5.8a protein.
Length = 874
Score = 27.5 bits (58), Expect = 3.1
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -3
Query: 321 SLMTGIRLFPGVCPSAEANDPLLPLGVRSPVGVRG 217
+LMT RLF + + N+ +LP GV VG G
Sbjct: 496 NLMTQSRLFQQFSAAKQINEMVLPRGVGGVVGAAG 530
>AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical
protein K06A5.8b protein.
Length = 942
Score = 27.5 bits (58), Expect = 3.1
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -3
Query: 321 SLMTGIRLFPGVCPSAEANDPLLPLGVRSPVGVRG 217
+LMT RLF + + N+ +LP GV VG G
Sbjct: 496 NLMTQSRLFQQFSAAKQINEMVLPRGVGGVVGAAG 530
>Z92789-8|CAB07222.3| 495|Caenorhabditis elegans Hypothetical
protein H02I12.8 protein.
Length = 495
Score = 27.1 bits (57), Expect = 4.1
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -3
Query: 348 LLRLQLVWCSLMTGIRLFPGV-CPSAEANDPLLPLGVRSPVGV 223
L R++ + C+L +RLFP V + E +D + GV P GV
Sbjct: 344 LSRMKYLECALKEALRLFPSVPIITRELSDDQVIGGVNIPKGV 386
>Z68336-9|CAA92741.3| 495|Caenorhabditis elegans Hypothetical
protein H02I12.8 protein.
Length = 495
Score = 27.1 bits (57), Expect = 4.1
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -3
Query: 348 LLRLQLVWCSLMTGIRLFPGV-CPSAEANDPLLPLGVRSPVGV 223
L R++ + C+L +RLFP V + E +D + GV P GV
Sbjct: 344 LSRMKYLECALKEALRLFPSVPIITRELSDDQVIGGVNIPKGV 386
>U88180-6|AAB42300.1| 373|Caenorhabditis elegans Hypothetical
protein T27A3.7 protein.
Length = 373
Score = 27.1 bits (57), Expect = 4.1
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -2
Query: 196 CREAKLTSICSGSCRRCTRICHF 128
CR+ S+ + C++C +CHF
Sbjct: 246 CRKIISRSVYTAECQKCHALCHF 268
>AC017117-3|AAF16619.1| 339|Caenorhabditis elegans Hypothetical
protein F43C11.9 protein.
Length = 339
Score = 27.1 bits (57), Expect = 4.1
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 8 ARPGSRPGSRAGSKPPSRHGSNLSLDSTDDAGTPSRI 118
A+P P R PS S+ L+ T + PSR+
Sbjct: 217 AKPAKLPSPRQPESKPSNEASSSQLEPTSASQPPSRV 253
>AC006720-7|AAF60444.1| 511|Caenorhabditis elegans Cytochrome p450
family protein 31A3 protein.
Length = 511
Score = 27.1 bits (57), Expect = 4.1
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -3
Query: 348 LLRLQLVWCSLMTGIRLFPGV-CPSAEANDPLLPLGVRSPVGV 223
L R++ + C+L +RLFP V + E +D + GV P GV
Sbjct: 360 LSRMKYLECALKEALRLFPSVPIITRELSDDQVIGGVNIPKGV 402
>U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical
protein F42C5.10 protein.
Length = 1292
Score = 26.6 bits (56), Expect = 5.4
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = +2
Query: 5 EARPGSRPGSRAGSKP--PSRHGSNLSLDSTDDAGTP 109
+ RP S P SRA S+P P + DDA +P
Sbjct: 792 QTRPVSHPVSRANSRPTTPGLEIKTIDFPRLDDAASP 828
>AC084158-10|AAK68568.1| 87|Caenorhabditis elegans Hypothetical
protein Y69A2AR.23 protein.
Length = 87
Score = 26.6 bits (56), Expect = 5.4
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +2
Query: 179 KLGLTTPNGGSSRP--RTPTGLLTPSGRSGSFASAEGQTPGKSRIPV 313
++G++ G S +P RTP TP+ + SA G +P K R P+
Sbjct: 41 RIGMSPRVGLSPKPIARTPQTARTPTKKGPMSPSAIGLSPMKKRSPL 87
>Z81499-2|CAB04088.1| 598|Caenorhabditis elegans Hypothetical
protein F11C3.2 protein.
Length = 598
Score = 26.2 bits (55), Expect = 7.2
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -3
Query: 297 FPGVCPSAEANDPLLPLGVRSPVGVRGRDDPPLGVV 190
FPGV S P+ P G R P+G+ G P+G+V
Sbjct: 115 FPGVRGSPGDQGPVGPPGRRGPMGIVG----PIGLV 146
>U29244-12|AAC71093.3| 604|Caenorhabditis elegans Hypothetical
protein ZK1248.13 protein.
Length = 604
Score = 26.2 bits (55), Expect = 7.2
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 72 ICLWIAQMMREHHLAYQ*GK*QIRVHRRHEPLQMLVSL 185
+C W+ Q +R+H ++R R +PLQ L L
Sbjct: 203 LCDWVKQFLRDHACHLD----ELRAERLEDPLQTLARL 236
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 26.2 bits (55), Expect = 7.2
Identities = 17/60 (28%), Positives = 22/60 (36%)
Frame = +2
Query: 89 TDDAGTPSRIPMRKVXXXXXXXXXXXXXXXKLGLTTPNGGSSRPRTPTGLLTPSGRSGSF 268
TDDAG P P+ K G RP P GL+ P+ SG++
Sbjct: 2537 TDDAGMPV-YPIVKPDGTPLATDSTGSFINDNGEIIEKDDEGRPFGPDGLILPTDASGNY 2595
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 26.2 bits (55), Expect = 7.2
Identities = 17/60 (28%), Positives = 22/60 (36%)
Frame = +2
Query: 89 TDDAGTPSRIPMRKVXXXXXXXXXXXXXXXKLGLTTPNGGSSRPRTPTGLLTPSGRSGSF 268
TDDAG P P+ K G RP P GL+ P+ SG++
Sbjct: 2600 TDDAGMPV-YPIVKPDGTPLATDSTGSFINDNGEIIEKDDEGRPFGPDGLILPTDASGNY 2658
>AY494976-1|AAR87493.1| 598|Caenorhabditis elegans UNC-122 protein.
Length = 598
Score = 26.2 bits (55), Expect = 7.2
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -3
Query: 297 FPGVCPSAEANDPLLPLGVRSPVGVRGRDDPPLGVV 190
FPGV S P+ P G R P+G+ G P+G+V
Sbjct: 115 FPGVRGSPGDQGPVGPPGRRGPMGIVG----PIGLV 146
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 26.2 bits (55), Expect = 7.2
Identities = 17/60 (28%), Positives = 22/60 (36%)
Frame = +2
Query: 89 TDDAGTPSRIPMRKVXXXXXXXXXXXXXXXKLGLTTPNGGSSRPRTPTGLLTPSGRSGSF 268
TDDAG P P+ K G RP P GL+ P+ SG++
Sbjct: 2600 TDDAGMPV-YPIVKPDGTPLATDSTGSFINDNGEIIEKDDEGRPFGPDGLILPTDASGNY 2658
>AC024791-30|AAL32250.2| 2460|Caenorhabditis elegans Hypothetical
protein Y47G6A.29 protein.
Length = 2460
Score = 26.2 bits (55), Expect = 7.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 221 RTPTGLLTPSGRSGSFASAEGQTPGKSRIPVIKEHHTNCNLNRQRT 358
RTPT LTPS +G AE P + + +I EH+ ++ T
Sbjct: 1525 RTPTLTLTPSAGAGGGERAE---PMRKKKKMICEHYLKADIGSVTT 1567
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,292,734
Number of Sequences: 27780
Number of extensions: 198727
Number of successful extensions: 847
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 835
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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