Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_E21
         (63 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    19   7.3  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    19   7.3  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    19   7.3  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    19   7.3  

>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 37  NYNNSLVPNSC 5
           NYNN+   N+C
Sbjct: 99  NYNNNNYNNNC 109


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 37  NYNNSLVPNSC 5
           NYNN+   N+C
Sbjct: 99  NYNNNNYNNNC 109


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 37  NYNNSLVPNSC 5
           NYNN+   N+C
Sbjct: 99  NYNNNNYNNNC 109


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 37  NYNNSLVPNSC 5
           NYNN+   N+C
Sbjct: 99  NYNNNNYNNNC 109


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,868
Number of Sequences: 438
Number of extensions: 72
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 2
effective length of database: 145,467
effective search space used:  2618406
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)