Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_E18
(334 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78413-6|CAB01658.1| 144|Caenorhabditis elegans Hypothetical pr... 158 1e-39
Z11115-14|CAC42391.1| 644|Caenorhabditis elegans Hypothetical p... 28 1.4
Z11115-13|CAA77454.2| 642|Caenorhabditis elegans Hypothetical p... 28 1.4
AF269694-1|AAF76193.1| 642|Caenorhabditis elegans LIN-9S protein. 28 1.4
AF269693-1|AAF76192.1| 644|Caenorhabditis elegans LIN-9L protein. 28 1.4
Z67995-5|CAA91945.2| 176|Caenorhabditis elegans Hypothetical pr... 27 2.5
Z81116-13|CAB03300.1| 245|Caenorhabditis elegans Hypothetical p... 27 4.3
U42834-4|AAA83584.1| 2229|Caenorhabditis elegans Hypothetical pr... 26 5.7
U40945-1|AAA81719.2| 656|Caenorhabditis elegans Hypothetical pr... 26 5.7
U00046-2|AAN65304.1| 860|Caenorhabditis elegans Temporarily ass... 26 5.7
U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily ass... 26 5.7
AF038614-7|AAB92060.2| 664|Caenorhabditis elegans Hypothetical ... 26 5.7
AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein. 26 5.7
AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein. 26 5.7
Z50859-2|CAA90727.2| 524|Caenorhabditis elegans Hypothetical pr... 26 7.5
U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z78062-3|CAB01496.1| 1232|Caenorhabditis elegans Hypothetical pr... 25 10.0
U21324-5|AAN63436.1| 486|Caenorhabditis elegans Hypothetical pr... 25 10.0
U21324-4|AAN63435.1| 537|Caenorhabditis elegans Hypothetical pr... 25 10.0
>Z78413-6|CAB01658.1| 144|Caenorhabditis elegans Hypothetical
protein T01C3.6 protein.
Length = 144
Score = 158 bits (383), Expect = 1e-39
Identities = 67/99 (67%), Positives = 89/99 (89%)
Frame = +2
Query: 38 IQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGV 217
+Q+VQ FGRKKTATAVA+CK+G G+++VNGRPL+ +EP++L+ KLQEP+LL+GKE+F V
Sbjct: 5 VQSVQTFGRKKTATAVAHCKKGQGLIKVNGRPLEFLEPQILRIKLQEPLLLVGKERFQDV 64
Query: 218 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASK 334
DIR+ V GGGHVAQ+YA+RQA++KAL+A+Y KYVDE SK
Sbjct: 65 DIRIRVSGGGHVAQIYAVRQALAKALVAYYHKYVDEQSK 103
>Z11115-14|CAC42391.1| 644|Caenorhabditis elegans Hypothetical
protein ZK637.7b protein.
Length = 644
Score = 28.3 bits (60), Expect = 1.4
Identities = 27/94 (28%), Positives = 47/94 (50%)
Frame = +2
Query: 41 QAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVD 220
+AV+ ++ V +C +G V V+ L L++ L LQ + +G +K S VD
Sbjct: 538 EAVRQMCSQQAGRFVEHCNQGLNVENVHA--LTLIQS-LTAVLLQ--VRTMGTQKISAVD 592
Query: 221 IRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVD 322
++ G +++ IR AI +AF+Q YV+
Sbjct: 593 LQSL---GDAISE---IRTAIHPRNVAFFQDYVE 620
>Z11115-13|CAA77454.2| 642|Caenorhabditis elegans Hypothetical
protein ZK637.7a protein.
Length = 642
Score = 28.3 bits (60), Expect = 1.4
Identities = 27/94 (28%), Positives = 47/94 (50%)
Frame = +2
Query: 41 QAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVD 220
+AV+ ++ V +C +G V V+ L L++ L LQ + +G +K S VD
Sbjct: 536 EAVRQMCSQQAGRFVEHCNQGLNVENVHA--LTLIQS-LTAVLLQ--VRTMGTQKISAVD 590
Query: 221 IRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVD 322
++ G +++ IR AI +AF+Q YV+
Sbjct: 591 LQSL---GDAISE---IRTAIHPRNVAFFQDYVE 618
>AF269694-1|AAF76193.1| 642|Caenorhabditis elegans LIN-9S protein.
Length = 642
Score = 28.3 bits (60), Expect = 1.4
Identities = 27/94 (28%), Positives = 47/94 (50%)
Frame = +2
Query: 41 QAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVD 220
+AV+ ++ V +C +G V V+ L L++ L LQ + +G +K S VD
Sbjct: 536 EAVRQMCSQQAGRFVEHCNQGLNVENVHA--LTLIQS-LTAVLLQ--VRTMGTQKISAVD 590
Query: 221 IRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVD 322
++ G +++ IR AI +AF+Q YV+
Sbjct: 591 LQSL---GDAISE---IRTAIHPRNVAFFQDYVE 618
>AF269693-1|AAF76192.1| 644|Caenorhabditis elegans LIN-9L protein.
Length = 644
Score = 28.3 bits (60), Expect = 1.4
Identities = 27/94 (28%), Positives = 47/94 (50%)
Frame = +2
Query: 41 QAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVD 220
+AV+ ++ V +C +G V V+ L L++ L LQ + +G +K S VD
Sbjct: 538 EAVRQMCSQQAGRFVEHCNQGLNVENVHA--LTLIQS-LTAVLLQ--VRTMGTQKISAVD 592
Query: 221 IRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVD 322
++ G +++ IR AI +AF+Q YV+
Sbjct: 593 LQSL---GDAISE---IRTAIHPRNVAFFQDYVE 620
>Z67995-5|CAA91945.2| 176|Caenorhabditis elegans Hypothetical
protein M153.3 protein.
Length = 176
Score = 27.5 bits (58), Expect = 2.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -1
Query: 127 SIYTQHSMSSFAVCYRSCSFLTAEN 53
S+ QHS+ +F VC ++C F + N
Sbjct: 130 SLTCQHSVFAFRVCRKTCGFCASVN 154
>Z81116-13|CAB03300.1| 245|Caenorhabditis elegans Hypothetical
protein T06C12.14 protein.
Length = 245
Score = 26.6 bits (56), Expect = 4.3
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -2
Query: 114 NTPCPRLQYATAVAVFLRPKTCTAWIGSRLASCTAAS 4
NT C R A A R TCT++I +C A S
Sbjct: 183 NTYCQRTCSRCASATTTRSSTCTSFISDSSTACRAWS 219
>U42834-4|AAA83584.1| 2229|Caenorhabditis elegans Hypothetical protein
F28B4.3 protein.
Length = 2229
Score = 26.2 bits (55), Expect = 5.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 221 IRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEA 328
I++TV G G QVY +++AL FY Y ++
Sbjct: 1138 IQLTVFGYGTTIQVYNGNGVLAEALELFYDDYTGQS 1173
>U40945-1|AAA81719.2| 656|Caenorhabditis elegans Hypothetical
protein F10D7.1 protein.
Length = 656
Score = 26.2 bits (55), Expect = 5.7
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 246 PPPFTVTLISTPENFSLPSKRIGS 175
PP F LI T EN S+ SKR+ S
Sbjct: 325 PPEFQRYLIETKENRSVRSKRVKS 348
>U00046-2|AAN65304.1| 860|Caenorhabditis elegans Temporarily
assigned gene nameprotein 152, isoform c protein.
Length = 860
Score = 26.2 bits (55), Expect = 5.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 122 NGRPLDLVEPRLLQYKLQEPILLLGKEKFS 211
NGRPLDL R + + + L EKFS
Sbjct: 584 NGRPLDLYSERYMSISPEAVVRLELNEKFS 613
>U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily assigned
gene nameprotein 152, isoform a protein.
Length = 2560
Score = 26.2 bits (55), Expect = 5.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 122 NGRPLDLVEPRLLQYKLQEPILLLGKEKFS 211
NGRPLDL R + + + L EKFS
Sbjct: 2255 NGRPLDLYSERYMSISPEAVVRLELNEKFS 2284
>AF038614-7|AAB92060.2| 664|Caenorhabditis elegans Hypothetical
protein F15E6.9 protein.
Length = 664
Score = 26.2 bits (55), Expect = 5.7
Identities = 10/47 (21%), Positives = 29/47 (61%)
Frame = +2
Query: 158 LQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIRQAISKALI 298
+Q+K ++ +++ KEK S +++R ++ +V ++ + Q + + L+
Sbjct: 296 IQWKYRDAVIVQAKEKMSAIELRRAIEAKTNVI-LHDVEQKVVRYLL 341
>AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.
Length = 2502
Score = 26.2 bits (55), Expect = 5.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 122 NGRPLDLVEPRLLQYKLQEPILLLGKEKFS 211
NGRPLDL R + + + L EKFS
Sbjct: 2197 NGRPLDLYSERYMSISPEAVVRLELNEKFS 2226
>AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.
Length = 2684
Score = 26.2 bits (55), Expect = 5.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 122 NGRPLDLVEPRLLQYKLQEPILLLGKEKFS 211
NGRPLDL R + + + L EKFS
Sbjct: 2379 NGRPLDLYSERYMSISPEAVVRLELNEKFS 2408
>Z50859-2|CAA90727.2| 524|Caenorhabditis elegans Hypothetical
protein T26C5.2 protein.
Length = 524
Score = 25.8 bits (54), Expect = 7.5
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -1
Query: 295 KGFRDGLSDCINLCNMSTTFYSHSN 221
KG+ DG+ CI LC +ST F S+
Sbjct: 423 KGY-DGMQLCIELCVLSTKFTCRSS 446
>U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical
protein W03A5.1 protein.
Length = 832
Score = 25.8 bits (54), Expect = 7.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 331 RCFVYIFLVESDKGFRDGLSDCINL 257
RCF + L E DKG D L + I +
Sbjct: 231 RCFFLMILTERDKGQDDKLEELIKI 255
>Z78062-3|CAB01496.1| 1232|Caenorhabditis elegans Hypothetical protein
F16D3.4 protein.
Length = 1232
Score = 25.4 bits (53), Expect = 10.0
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = +2
Query: 110 VLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTVKGGG 247
++ + P+D + R + ++L+ P+L LG E + + + + V GG
Sbjct: 1004 LMNIYSEPMDFISDRTV-FQLK-PLLDLGSEYYEQLILGIVVSAGG 1047
>U21324-5|AAN63436.1| 486|Caenorhabditis elegans Hypothetical
protein C35D10.7b protein.
Length = 486
Score = 25.4 bits (53), Expect = 10.0
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 125 GRPLDLVEPRLLQYKLQEPILLLGKEKF 208
G +++VE +LLQ+K E +L G+E F
Sbjct: 99 GPMVEIVEKKLLQHKNAEKLLNDGREVF 126
>U21324-4|AAN63435.1| 537|Caenorhabditis elegans Hypothetical
protein C35D10.7a protein.
Length = 537
Score = 25.4 bits (53), Expect = 10.0
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 125 GRPLDLVEPRLLQYKLQEPILLLGKEKF 208
G +++VE +LLQ+K E +L G+E F
Sbjct: 150 GPMVEIVEKKLLQHKNAEKLLNDGREVF 177
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,771,514
Number of Sequences: 27780
Number of extensions: 184947
Number of successful extensions: 438
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 438
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 408121444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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