Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_E18
         (334 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                24   0.56 
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    23   0.73 
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   2.2  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    20   6.8  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    20   6.8  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    20   6.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    20   6.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             20   6.8  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.8 bits (49), Expect = 0.56
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 260 PVQHVHHLLQSL*YPHQRTFPCLAK 186
           P  H HH  QSL + H R  P L++
Sbjct: 350 PHHHHHHQTQSLQHLHYRQPPTLSE 374


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 23.4 bits (48), Expect = 0.73
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -1

Query: 286 RDGLSDCINLCNMSTTFYSHSNIHTRE 206
           RD   +CI +CNM         IHT E
Sbjct: 49  RDAYDNCITVCNMENV--DPLGIHTGE 73


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -2

Query: 66  LRPKTCTAWIGSRLASCTAA 7
           L P  C +W+   +  CTA+
Sbjct: 106 LGPMLCDSWVSLDILLCTAS 125


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -1

Query: 268 CINLCNMSTTFYSHSNIH 215
           C+N   +++   SHSN++
Sbjct: 26  CVNKSMLNSHLKSHSNVY 43


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 140 GRGGVHLHATLH 105
           G G  H+HAT H
Sbjct: 420 GHGHSHIHATPH 431


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -2

Query: 51  CTAWIGSRLASCTAA 7
           C  W+   + SCTA+
Sbjct: 114 CDLWVSFDVLSCTAS 128


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 36   QSKPYKFSAVRK 71
            +SKPYKF  + K
Sbjct: 1721 KSKPYKFHCMEK 1732


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = +1

Query: 121  KWTPPRPGRTQTSSVQ 168
            ++TPP+P   Q    Q
Sbjct: 996  RYTPPQPANAQQGQAQ 1011


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,994
Number of Sequences: 438
Number of extensions: 2011
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7466580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)