Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_E14
         (517 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    23   1.4  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   2.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   2.5  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   7.5  
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    21   7.5  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   10.0 

>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 129 IDYTKFLDYFFIYLSFRF*FVT 64
           + Y   LD FF++LSF F F T
Sbjct: 270 VPYPTALD-FFVFLSFAFIFAT 290


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +1

Query: 304 PTRKRNRKIMTYHMIV 351
           PT++R  K++ YH+ +
Sbjct: 906 PTKRRTMKVVKYHLFL 921


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +1

Query: 304 PTRKRNRKIMTYHMIV 351
           PT++R  K++ YH+ +
Sbjct: 944 PTKRRTMKVVKYHLFL 959


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 457 YIIYTSYRTFNVHEYS 410
           YI+ T+Y + N+ EY+
Sbjct: 200 YIVNTNYSSKNMREYN 215


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
          isomerase protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 64 VGIISYFLQERKSLVPNSCS 5
          VG+ S +L   K+++PN+ S
Sbjct: 40 VGVPSIYLTYAKNILPNNIS 59


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +3

Query: 108 LRISYNRLITF 140
           LR+S NRL+TF
Sbjct: 895 LRLSGNRLVTF 905


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,363
Number of Sequences: 438
Number of extensions: 2600
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)