Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_E13
         (389 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               22   2.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   6.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   6.6  
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    21   6.6  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    21   6.6  

>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 89  CHFNYIIIMNLNVANIGKF 145
           C F+ + +MN NV ++ KF
Sbjct: 59  CLFHRLALMNDNVFDVSKF 77


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 275 INALRKNDILPV 310
           +N L  NDILPV
Sbjct: 43  VNTLISNDILPV 54


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 275 INALRKNDILPV 310
           +N L  NDILPV
Sbjct: 81  VNTLISNDILPV 92


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +2

Query: 71  CFLRTLCHFNYIIIMNLNVANI 136
           C+L+   H N+I + ++N  N+
Sbjct: 121 CWLQMTKHHNFIKVCSVNDVNM 142


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 173 YGYQQVRNKWANWLMIRDVKR 235
           +GYQ +RN+  N+ + +  KR
Sbjct: 283 FGYQDMRNRGNNFPVYQVEKR 303


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,538
Number of Sequences: 438
Number of extensions: 1648
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9514659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)