Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_E09
(567 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 239 6e-63
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 239 6e-63
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 239 6e-63
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 239 6e-63
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 239 6e-63
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 239 6e-63
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 239 6e-63
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 239 6e-63
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 239 6e-63
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 239 6e-63
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 239 6e-63
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 237 2e-62
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 235 1e-61
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 232 6e-61
U58837-1|AAB63387.1| 1251|Homo sapiens cGMP-gated cation channel... 33 0.53
U18945-1|AAA91633.1| 299|Homo sapiens cyclic nucleotide gated c... 33 0.53
AF458587-1|AAM49715.1| 302|Homo sapiens hepatoma-derived growth... 33 0.53
AF042498-1|AAC04830.1| 1245|Homo sapiens rod photoreceptor CNG-c... 33 0.53
AL158192-2|CAI13709.1| 471|Homo sapiens heparan sulfate 6-O-sul... 33 0.70
AL138816-1|CAH71574.1| 471|Homo sapiens heparan sulfate 6-O-sul... 33 0.70
AJ491324-1|CAD36957.1| 2464|Homo sapiens retinitis pigmentosa 1-... 33 0.70
CR533508-1|CAG38539.1| 473|Homo sapiens MGC8407 protein. 33 0.93
AF539426-1|AAN33062.1| 471|Homo sapiens heparan sulfate 6-O-sul... 33 0.93
BC019256-1|AAH19256.1| 501|Homo sapiens CaM kinase-like vesicle... 32 1.6
BC017363-1|AAH17363.1| 501|Homo sapiens CaM kinase-like vesicle... 32 1.6
BC005828-1|AAH05828.1| 501|Homo sapiens CaM kinase-like vesicle... 32 1.6
BC001921-1|AAH01921.1| 501|Homo sapiens CaM kinase-like vesicle... 32 1.6
BC000497-1|AAH00497.1| 501|Homo sapiens CaM kinase-like vesicle... 32 1.6
AY168346-1|AAN86964.1| 2480|Homo sapiens retinitis pigmentosa 1-... 32 1.6
AY168345-1|AAN86963.1| 2464|Homo sapiens retinitis pigmentosa 1-... 32 1.6
AY168344-1|AAN86962.1| 2448|Homo sapiens retinitis pigmentosa 1-... 32 1.6
AY168343-1|AAN86961.1| 2432|Homo sapiens retinitis pigmentosa 1-... 32 1.6
AY168342-1|AAN86960.1| 2416|Homo sapiens retinitis pigmentosa 1-... 32 1.6
AY168341-1|AAN86959.1| 2400|Homo sapiens retinitis pigmentosa 1-... 32 1.6
AK075294-1|BAC11528.1| 470|Homo sapiens protein ( Homo sapiens ... 32 1.6
AK075043-1|BAC11370.1| 265|Homo sapiens protein ( Homo sapiens ... 32 1.6
AK074899-1|BAC11278.1| 470|Homo sapiens protein ( Homo sapiens ... 32 1.6
AK074856-1|BAC11248.1| 501|Homo sapiens protein ( Homo sapiens ... 32 1.6
AL645608-9|CAI15571.2| 676|Homo sapiens chromosome 1 open readi... 28 1.7
AK123855-1|BAC85711.1| 676|Homo sapiens protein ( Homo sapiens ... 28 1.7
BC110997-1|AAI10998.1| 916|Homo sapiens coiled-coil domain cont... 31 2.8
BC040264-1|AAH40264.1| 751|Homo sapiens coiled-coil domain cont... 31 2.8
AK027410-1|BAB55094.1| 504|Homo sapiens protein ( Homo sapiens ... 31 2.8
AB202097-1|BAE78617.1| 2089|Homo sapiens mediator of DNA damage ... 31 2.8
U50822-1|AAA93480.1| 356|Homo sapiens NEUROD protein. 31 3.7
D82347-1|BAA11558.1| 356|Homo sapiens NeuroD protein. 31 3.7
BC050603-1|AAH50603.1| 562|Homo sapiens methyltransferase 10 do... 31 3.7
BC009046-1|AAH09046.1| 356|Homo sapiens neurogenic differentiat... 31 3.7
AF045152-1|AAC83145.1| 356|Homo sapiens neurogenic differentiat... 31 3.7
AB018693-1|BAA76603.1| 356|Homo sapiens NeuroD protein. 31 3.7
AB016079-1|BAA36519.1| 356|Homo sapiens BETA2 protein. 31 3.7
AB009997-1|BAA87605.1| 356|Homo sapiens NeuroD protein. 31 3.7
AY367050-1|AAR15506.1| 550|Homo sapiens NOEL1C protein. 30 4.9
AY280969-1|AAQ18787.1| 504|Homo sapiens no Rab11-binding protei... 30 4.9
AY280968-1|AAQ18786.1| 1283|Homo sapiens Rab11-family interactin... 30 4.9
AY280967-1|AAQ18785.1| 504|Homo sapiens no Rab11-binding protei... 30 4.9
AY280966-1|AAQ18784.1| 612|Homo sapiens Rab11-family interactin... 30 4.9
AK122583-1|BAC56924.1| 681|Homo sapiens FLJ00294 protein protein. 30 4.9
AK090437-1|BAC03418.1| 469|Homo sapiens FLJ00355 protein protein. 30 4.9
AL590383-2|CAH71374.2| 2279|Homo sapiens zinc finger protein 318... 30 6.5
AL583834-6|CAI14459.2| 2279|Homo sapiens zinc finger protein 318... 30 6.5
AF121141-1|AAD17298.1| 2099|Homo sapiens endocrine regulator pro... 30 6.5
AF090114-1|AAD47387.1| 2099|Homo sapiens unknown protein. 30 6.5
AY965853-1|AAX77219.1| 2461|Homo sapiens SMRTE-tau protein. 29 8.6
AL593848-11|CAI17258.1| 1371|Homo sapiens ADAM metallopeptidase ... 29 8.6
AL593848-9|CAI17257.1| 1340|Homo sapiens ADAM metallopeptidase w... 29 8.6
AL158826-24|CAI12851.1| 1371|Homo sapiens ADAM metallopeptidase ... 29 8.6
AL158826-22|CAI12852.1| 1340|Homo sapiens ADAM metallopeptidase ... 29 8.6
AK124447-1|BAC85854.1| 434|Homo sapiens protein ( Homo sapiens ... 29 8.6
AJ420810-1|CAD12729.1| 1371|Homo sapiens ADAMTS-13 protein, vari... 29 8.6
AJ305314-1|CAC83682.1| 1340|Homo sapiens ADAMTS-13 protein protein. 29 8.6
AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing ... 29 8.6
AF125672-1|AAD22973.1| 2507|Homo sapiens silencing mediator of r... 29 8.6
AF113003-1|AAD20946.1| 2517|Homo sapiens silencing mediator of r... 29 8.6
AB209999-1|BAE06081.1| 1731|Homo sapiens JARID1A variant protein... 29 8.6
AB209089-1|BAD92326.1| 1469|Homo sapiens nuclear receptor co-rep... 29 8.6
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 239 bits (584), Expect = 6e-63
Identities = 106/185 (57%), Positives = 137/185 (74%)
Frame = +1
Query: 13 KTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFR 192
KTK+AV+ L+++ AW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+ +AFR
Sbjct: 163 KTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFR 222
Query: 193 NIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLPQP 372
NIPGI + APGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP
Sbjct: 223 NIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMH 282
Query: 373 KMANTDLSRLLKSEEIRKVLRAPNKRVVRATRKLNPLTNTKAMLKLNPYAAVLRRKAVLE 552
KM NTDLSR+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +RR +L
Sbjct: 283 KMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILR 342
Query: 553 QVRRN 567
Q R +
Sbjct: 343 QARNH 347
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 239 bits (584), Expect = 6e-63
Identities = 106/185 (57%), Positives = 137/185 (74%)
Frame = +1
Query: 13 KTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFR 192
KTK+AV+ L+++ AW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+ +AFR
Sbjct: 163 KTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFR 222
Query: 193 NIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLPQP 372
NIPGI + APGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP
Sbjct: 223 NIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMH 282
Query: 373 KMANTDLSRLLKSEEIRKVLRAPNKRVVRATRKLNPLTNTKAMLKLNPYAAVLRRKAVLE 552
KM NTDLSR+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +RR +L
Sbjct: 283 KMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILR 342
Query: 553 QVRRN 567
Q R +
Sbjct: 343 QARNH 347
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 239 bits (584), Expect = 6e-63
Identities = 106/185 (57%), Positives = 137/185 (74%)
Frame = +1
Query: 13 KTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFR 192
KTK+AV+ L+++ AW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+ +AFR
Sbjct: 163 KTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFR 222
Query: 193 NIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLPQP 372
NIPGI + APGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP
Sbjct: 223 NIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMH 282
Query: 373 KMANTDLSRLLKSEEIRKVLRAPNKRVVRATRKLNPLTNTKAMLKLNPYAAVLRRKAVLE 552
KM NTDLSR+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +RR +L
Sbjct: 283 KMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILR 342
Query: 553 QVRRN 567
Q R +
Sbjct: 343 QARNH 347
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 239 bits (584), Expect = 6e-63
Identities = 106/185 (57%), Positives = 137/185 (74%)
Frame = +1
Query: 13 KTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFR 192
KTK+AV+ L+++ AW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+ +AFR
Sbjct: 163 KTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFR 222
Query: 193 NIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLPQP 372
NIPGI + APGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP
Sbjct: 223 NIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMH 282
Query: 373 KMANTDLSRLLKSEEIRKVLRAPNKRVVRATRKLNPLTNTKAMLKLNPYAAVLRRKAVLE 552
KM NTDLSR+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +RR +L
Sbjct: 283 KMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILR 342
Query: 553 QVRRN 567
Q R +
Sbjct: 343 QARNH 347
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 239 bits (584), Expect = 6e-63
Identities = 106/185 (57%), Positives = 137/185 (74%)
Frame = +1
Query: 13 KTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFR 192
KTK+AV+ L+++ AW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+ +AFR
Sbjct: 163 KTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFR 222
Query: 193 NIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLPQP 372
NIPGI + APGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP
Sbjct: 223 NIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMH 282
Query: 373 KMANTDLSRLLKSEEIRKVLRAPNKRVVRATRKLNPLTNTKAMLKLNPYAAVLRRKAVLE 552
KM NTDLSR+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +RR +L
Sbjct: 283 KMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILR 342
Query: 553 QVRRN 567
Q R +
Sbjct: 343 QARNH 347
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 239 bits (584), Expect = 6e-63
Identities = 106/185 (57%), Positives = 137/185 (74%)
Frame = +1
Query: 13 KTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFR 192
KTK+AV+ L+++ AW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+ +AFR
Sbjct: 163 KTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFR 222
Query: 193 NIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLPQP 372
NIPGI + APGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP
Sbjct: 223 NIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMH 282
Query: 373 KMANTDLSRLLKSEEIRKVLRAPNKRVVRATRKLNPLTNTKAMLKLNPYAAVLRRKAVLE 552
KM NTDLSR+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +RR +L
Sbjct: 283 KMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILR 342
Query: 553 QVRRN 567
Q R +
Sbjct: 343 QARNH 347
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 239 bits (584), Expect = 6e-63
Identities = 106/185 (57%), Positives = 137/185 (74%)
Frame = +1
Query: 13 KTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFR 192
KTK+AV+ L+++ AW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+ +AFR
Sbjct: 163 KTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFR 222
Query: 193 NIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLPQP 372
NIPGI + APGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP
Sbjct: 223 NIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMH 282
Query: 373 KMANTDLSRLLKSEEIRKVLRAPNKRVVRATRKLNPLTNTKAMLKLNPYAAVLRRKAVLE 552
KM NTDLSR+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +RR +L
Sbjct: 283 KMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILR 342
Query: 553 QVRRN 567
Q R +
Sbjct: 343 QARNH 347
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 239 bits (584), Expect = 6e-63
Identities = 106/185 (57%), Positives = 137/185 (74%)
Frame = +1
Query: 13 KTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFR 192
KTK+AV+ L+++ AW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+ +AFR
Sbjct: 163 KTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFR 222
Query: 193 NIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLPQP 372
NIPGI + APGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP
Sbjct: 223 NIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMH 282
Query: 373 KMANTDLSRLLKSEEIRKVLRAPNKRVVRATRKLNPLTNTKAMLKLNPYAAVLRRKAVLE 552
KM NTDLSR+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +RR +L
Sbjct: 283 KMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILR 342
Query: 553 QVRRN 567
Q R +
Sbjct: 343 QARNH 347
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 239 bits (584), Expect = 6e-63
Identities = 106/185 (57%), Positives = 137/185 (74%)
Frame = +1
Query: 13 KTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFR 192
KTK+AV+ L+++ AW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+ +AFR
Sbjct: 163 KTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFR 222
Query: 193 NIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLPQP 372
NIPGI + APGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP
Sbjct: 223 NIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMH 282
Query: 373 KMANTDLSRLLKSEEIRKVLRAPNKRVVRATRKLNPLTNTKAMLKLNPYAAVLRRKAVLE 552
KM NTDLSR+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +RR +L
Sbjct: 283 KMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILR 342
Query: 553 QVRRN 567
Q R +
Sbjct: 343 QARNH 347
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 239 bits (584), Expect = 6e-63
Identities = 106/185 (57%), Positives = 137/185 (74%)
Frame = +1
Query: 13 KTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFR 192
KTK+AV+ L+++ AW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+ +AFR
Sbjct: 163 KTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFR 222
Query: 193 NIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLPQP 372
NIPGI + APGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP
Sbjct: 223 NIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMH 282
Query: 373 KMANTDLSRLLKSEEIRKVLRAPNKRVVRATRKLNPLTNTKAMLKLNPYAAVLRRKAVLE 552
KM NTDLSR+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +RR +L
Sbjct: 283 KMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILR 342
Query: 553 QVRRN 567
Q R +
Sbjct: 343 QARNH 347
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 239 bits (584), Expect = 6e-63
Identities = 106/185 (57%), Positives = 137/185 (74%)
Frame = +1
Query: 13 KTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFR 192
KTK+AV+ L+++ AW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+ +AFR
Sbjct: 163 KTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFR 222
Query: 193 NIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLPQP 372
NIPGI + APGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP
Sbjct: 223 NIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMH 282
Query: 373 KMANTDLSRLLKSEEIRKVLRAPNKRVVRATRKLNPLTNTKAMLKLNPYAAVLRRKAVLE 552
KM NTDLSR+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +RR +L
Sbjct: 283 KMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILR 342
Query: 553 QVRRN 567
Q R +
Sbjct: 343 QARNH 347
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 237 bits (580), Expect = 2e-62
Identities = 106/185 (57%), Positives = 137/185 (74%)
Frame = +1
Query: 13 KTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFR 192
KTK+AV+ L+++ AW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+ +AFR
Sbjct: 177 KTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFR 236
Query: 193 NIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLPQP 372
NIPGI + APGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP
Sbjct: 237 NIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMH 296
Query: 373 KMANTDLSRLLKSEEIRKVLRAPNKRVVRATRKLNPLTNTKAMLKLNPYAAVLRRKAVLE 552
KM NTDLSR+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +RR +L
Sbjct: 297 KMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILC 356
Query: 553 QVRRN 567
Q R +
Sbjct: 357 QARNH 361
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 235 bits (574), Expect = 1e-61
Identities = 104/185 (56%), Positives = 136/185 (73%)
Frame = +1
Query: 13 KTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFR 192
KTK+AV+ L+++ AW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+ +AFR
Sbjct: 163 KTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFR 222
Query: 193 NIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLPQP 372
NIPGI + APGGH+GRF IW +SAF +LD L+G+W+ + K N+NLP
Sbjct: 223 NIPGITLLNVSKLNILKLAPGGHVGRFCIWIESAFRKLDELYGTWRKAASLKSNYNLPMH 282
Query: 373 KMANTDLSRLLKSEEIRKVLRAPNKRVVRATRKLNPLTNTKAMLKLNPYAAVLRRKAVLE 552
+M NTDLSR+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +RR +L
Sbjct: 283 EMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILR 342
Query: 553 QVRRN 567
Q R +
Sbjct: 343 QARNH 347
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 232 bits (568), Expect = 6e-61
Identities = 105/185 (56%), Positives = 136/185 (73%)
Frame = +1
Query: 13 KTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFR 192
KTK+AV+ L+++ AW+D+ KVY SQR+RAGKGKMRNRR +QR+GP IIYN+D G+ +AFR
Sbjct: 163 KTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRR-IQRRGPCIIYNEDNGIIKAFR 221
Query: 193 NIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFNLPQP 372
NIPGI + APGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP
Sbjct: 222 NIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMH 281
Query: 373 KMANTDLSRLLKSEEIRKVLRAPNKRVVRATRKLNPLTNTKAMLKLNPYAAVLRRKAVLE 552
KM NTDLSR+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA +RR +L
Sbjct: 282 KMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILR 341
Query: 553 QVRRN 567
Q R +
Sbjct: 342 QARNH 346
>U58837-1|AAB63387.1| 1251|Homo sapiens cGMP-gated cation channel
beta subunit protein.
Length = 1251
Score = 33.5 bits (73), Expect = 0.53
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +3
Query: 420 PQGPARAQQACC*SDTEIEPADQYEGDVEAEPVRRGAETEGGSRTGQE 563
PQ P ++ + E+EP + E +VE EP AETE S +E
Sbjct: 10 PQPPGTPRKTKMQEEEEVEPEPEMEAEVEPEPNPEEAETESESMPPEE 57
>U18945-1|AAA91633.1| 299|Homo sapiens cyclic nucleotide gated
channel gamma subunit protein.
Length = 299
Score = 33.5 bits (73), Expect = 0.53
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +3
Query: 420 PQGPARAQQACC*SDTEIEPADQYEGDVEAEPVRRGAETEGGSRTGQE 563
PQ P ++ + E+EP + E +VE EP AETE S +E
Sbjct: 10 PQPPGTPRKTKMQEEEEVEPEPEMEAEVEPEPNPEEAETESESMPPEE 57
>AF458587-1|AAM49715.1| 302|Homo sapiens hepatoma-derived growth
factor HGDF5 protein.
Length = 302
Score = 33.5 bits (73), Expect = 0.53
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +3
Query: 339 EGEEELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPA--DQYEGDVEAE 512
E E+EL+ P + + P+P E +P+ Q A D + EP + GD +AE
Sbjct: 149 EPEQELEQEPELEPEPEPEPEPEPEPEPEPEPEPQPAYDLLDAKEEPGLIEAEPGDQQAE 208
Query: 513 PVR-RGAETE 539
VR + AE E
Sbjct: 209 QVREQHAEAE 218
>AF042498-1|AAC04830.1| 1245|Homo sapiens rod photoreceptor
CNG-channel beta subunit protein.
Length = 1245
Score = 33.5 bits (73), Expect = 0.53
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +3
Query: 420 PQGPARAQQACC*SDTEIEPADQYEGDVEAEPVRRGAETEGGSRTGQE 563
PQ P ++ + E+EP + E +VE EP AETE S +E
Sbjct: 10 PQPPGTPRKTKMQEEEEVEPEPEMEAEVEPEPNPEEAETESESMPPEE 57
>AL158192-2|CAI13709.1| 471|Homo sapiens heparan sulfate
6-O-sulfotransferase 3 protein.
Length = 471
Score = 33.1 bits (72), Expect = 0.70
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +3
Query: 336 IEGEEELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPADQYEGDVEAEP 515
+ G AP E+ + RPQ R P+GP + A + + EP D EG+ E E
Sbjct: 51 VPGPARRAQAPPEEWERRPQLPPPPRGPPEGP---RGAAAPEEEDEEPGDPREGEEEEEE 107
Query: 516 VRRGAET-EGGS 548
E E GS
Sbjct: 108 DEPDPEAPENGS 119
>AL138816-1|CAH71574.1| 471|Homo sapiens heparan sulfate
6-O-sulfotransferase 3 protein.
Length = 471
Score = 33.1 bits (72), Expect = 0.70
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +3
Query: 336 IEGEEELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPADQYEGDVEAEP 515
+ G AP E+ + RPQ R P+GP + A + + EP D EG+ E E
Sbjct: 51 VPGPARRAQAPPEEWERRPQLPPPPRGPPEGP---RGAAAPEEEDEEPGDPREGEEEEEE 107
Query: 516 VRRGAET-EGGS 548
E E GS
Sbjct: 108 DEPDPEAPENGS 119
>AJ491324-1|CAD36957.1| 2464|Homo sapiens retinitis pigmentosa 1-like
protein 1 protein.
Length = 2464
Score = 33.1 bits (72), Expect = 0.70
Identities = 23/76 (30%), Positives = 34/76 (44%)
Frame = +3
Query: 339 EGEEELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPADQYEGDVEAEPV 518
E EEE QP +G P+ E + + +G A +A + E+E + E + EA+P
Sbjct: 2232 EAEEEAQPEL--EGVEAPEAEGEAQPESEG-IEAPEAEGEAQPELEGVEAPEAEEEAQPE 2288
Query: 519 RRGAETEGGSRTGQEE 566
G ET Q E
Sbjct: 2289 PEGVETPEAEGEAQPE 2304
Score = 29.5 bits (63), Expect = 8.6
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 7/87 (8%)
Frame = +3
Query: 327 EDTIEGEEELQPAPAEDGQHRPQPSAEVRRDPQGPAR-------AQQACC*SDTEIEPAD 485
E + E E AP +G+ +P+ +D +G A+ AQ+A + E+E +
Sbjct: 2186 EGEAQPESEGIEAPEAEGEAQPESEGVEAQDAEGEAQPESEGIEAQEAEEEAQPELEGVE 2245
Query: 486 QYEGDVEAEPVRRGAETEGGSRTGQEE 566
E + EA+P G E Q E
Sbjct: 2246 APEAEGEAQPESEGIEAPEAEGEAQPE 2272
>CR533508-1|CAG38539.1| 473|Homo sapiens MGC8407 protein.
Length = 473
Score = 32.7 bits (71), Expect = 0.93
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 343 EKKNFNLPQPKMANTDLSRLLKSEEIRKVLRAPNK 447
+KKN+N P DL +++K+EE ++ RA +K
Sbjct: 10 DKKNYNQPSEVTGRYDLGQVIKTEEFCEIFRAKDK 44
>AF539426-1|AAN33062.1| 471|Homo sapiens heparan sulfate
6-O-sulfotransferase 3 protein.
Length = 471
Score = 32.7 bits (71), Expect = 0.93
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = +3
Query: 336 IEGEEELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPADQYEGDVEAEP 515
+ G AP E+ + RPQ R P+GP A + + EP D EG+ E E
Sbjct: 51 VPGPARRAQAPPEEWERRPQLPPPPRGPPEGPRGAXAP---EEEDEEPGDPREGEEEEEE 107
Query: 516 VRRGAET-EGGS 548
E E GS
Sbjct: 108 DEPDPEAPENGS 119
>BC019256-1|AAH19256.1| 501|Homo sapiens CaM kinase-like
vesicle-associated protein.
Length = 501
Score = 31.9 bits (69), Expect = 1.6
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 343 EKKNFNLPQPKMANTDLSRLLKSEEIRKVLRAPNK 447
+KKN+N P DL +++K+EE ++ RA +K
Sbjct: 10 DKKNYNQPSEVTDRYDLGQVIKTEEFCEIFRAKDK 44
>BC017363-1|AAH17363.1| 501|Homo sapiens CaM kinase-like
vesicle-associated protein.
Length = 501
Score = 31.9 bits (69), Expect = 1.6
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 343 EKKNFNLPQPKMANTDLSRLLKSEEIRKVLRAPNK 447
+KKN+N P DL +++K+EE ++ RA +K
Sbjct: 10 DKKNYNQPSEVTDRYDLGQVIKTEEFCEIFRAKDK 44
>BC005828-1|AAH05828.1| 501|Homo sapiens CaM kinase-like
vesicle-associated protein.
Length = 501
Score = 31.9 bits (69), Expect = 1.6
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 343 EKKNFNLPQPKMANTDLSRLLKSEEIRKVLRAPNK 447
+KKN+N P DL +++K+EE ++ RA +K
Sbjct: 10 DKKNYNQPSEVTDRYDLGQVIKTEEFCEIFRAKDK 44
>BC001921-1|AAH01921.1| 501|Homo sapiens CaM kinase-like
vesicle-associated protein.
Length = 501
Score = 31.9 bits (69), Expect = 1.6
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 343 EKKNFNLPQPKMANTDLSRLLKSEEIRKVLRAPNK 447
+KKN+N P DL +++K+EE ++ RA +K
Sbjct: 10 DKKNYNQPSEVTDRYDLGQVIKTEEFCEIFRAKDK 44
>BC000497-1|AAH00497.1| 501|Homo sapiens CaM kinase-like
vesicle-associated protein.
Length = 501
Score = 31.9 bits (69), Expect = 1.6
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 343 EKKNFNLPQPKMANTDLSRLLKSEEIRKVLRAPNK 447
+KKN+N P DL +++K+EE ++ RA +K
Sbjct: 10 DKKNYNQPSEVTDRYDLGQVIKTEEFCEIFRAKDK 44
>AY168346-1|AAN86964.1| 2480|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2480
Score = 31.9 bits (69), Expect = 1.6
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +3
Query: 336 IEGEE-ELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPADQYEGDVEAE 512
IE +E E + P +G P+ E + + +G A +A + E+E + E + EA+
Sbjct: 2244 IEAQEAEKEAQPELEGVEAPEAEGEAQPESEG-IEAPEAEGEAQPELEGVEAPEAEEEAQ 2302
Query: 513 PVRRGAETEGGSRTGQEE 566
P G ET Q E
Sbjct: 2303 PEPEGVETPEAEGEAQPE 2320
>AY168345-1|AAN86963.1| 2464|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2464
Score = 31.9 bits (69), Expect = 1.6
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +3
Query: 336 IEGEE-ELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPADQYEGDVEAE 512
IE +E E + P +G P+ E + + +G A +A + E+E + E + EA+
Sbjct: 2228 IEAQEAEKEAQPELEGVEAPEAEGEAQPESEG-IEAPEAEGEAQPELEGVEAPEAEEEAQ 2286
Query: 513 PVRRGAETEGGSRTGQEE 566
P G ET Q E
Sbjct: 2287 PEPEGVETPEAEGEAQPE 2304
>AY168344-1|AAN86962.1| 2448|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2448
Score = 31.9 bits (69), Expect = 1.6
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +3
Query: 336 IEGEE-ELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPADQYEGDVEAE 512
IE +E E + P +G P+ E + + +G A +A + E+E + E + EA+
Sbjct: 2212 IEAQEAEKEAQPELEGVEAPEAEGEAQPESEG-IEAPEAEGEAQPELEGVEAPEAEEEAQ 2270
Query: 513 PVRRGAETEGGSRTGQEE 566
P G ET Q E
Sbjct: 2271 PEPEGVETPEAEGEAQPE 2288
>AY168343-1|AAN86961.1| 2432|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2432
Score = 31.9 bits (69), Expect = 1.6
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +3
Query: 336 IEGEE-ELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPADQYEGDVEAE 512
IE +E E + P +G P+ E + + +G A +A + E+E + E + EA+
Sbjct: 2196 IEAQEAEKEAQPELEGVEAPEAEGEAQPESEG-IEAPEAEGEAQPELEGVEAPEAEEEAQ 2254
Query: 513 PVRRGAETEGGSRTGQEE 566
P G ET Q E
Sbjct: 2255 PEPEGVETPEAEGEAQPE 2272
>AY168342-1|AAN86960.1| 2416|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2416
Score = 31.9 bits (69), Expect = 1.6
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +3
Query: 336 IEGEE-ELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPADQYEGDVEAE 512
IE +E E + P +G P+ E + + +G A +A + E+E + E + EA+
Sbjct: 2180 IEAQEAEKEAQPELEGVEAPEAEGEAQPESEG-IEAPEAEGEAQPELEGVEAPEAEEEAQ 2238
Query: 513 PVRRGAETEGGSRTGQEE 566
P G ET Q E
Sbjct: 2239 PEPEGVETPEAEGEAQPE 2256
>AY168341-1|AAN86959.1| 2400|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2400
Score = 31.9 bits (69), Expect = 1.6
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +3
Query: 336 IEGEE-ELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPADQYEGDVEAE 512
IE +E E + P +G P+ E + + +G A +A + E+E + E + EA+
Sbjct: 2164 IEAQEAEKEAQPELEGVEAPEAEGEAQPESEG-IEAPEAEGEAQPELEGVEAPEAEEEAQ 2222
Query: 513 PVRRGAETEGGSRTGQEE 566
P G ET Q E
Sbjct: 2223 PEPEGVETPEAEGEAQPE 2240
>AK075294-1|BAC11528.1| 470|Homo sapiens protein ( Homo sapiens
cDNA FLJ90813 fis, clone Y79AA1000967, weakly similar to
CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE TYPE I (EC
2.7.1.123). ).
Length = 470
Score = 31.9 bits (69), Expect = 1.6
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 343 EKKNFNLPQPKMANTDLSRLLKSEEIRKVLRAPNK 447
+KKN+N P DL +++K+EE ++ RA +K
Sbjct: 10 DKKNYNQPSEVTDRYDLGQVIKTEEFCEIFRAKDK 44
>AK075043-1|BAC11370.1| 265|Homo sapiens protein ( Homo sapiens
cDNA FLJ90562 fis, clone OVARC1001163. ).
Length = 265
Score = 31.9 bits (69), Expect = 1.6
Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +3
Query: 171 GSDSCIPQHPWHRDAQREQAEPPEAGTRRPSRQVHHL--DQVRFR*A*PAVRLVEDTIEG 344
G + HP D +REQA AG R P ++HHL D VR R PA+ L +
Sbjct: 127 GHPGAVRGHPGGGDQRREQAGGWHAGRRLP--ELHHLRGDAVRLR--GPALCLPLPGVRR 182
Query: 345 EE-ELQPAPAEDGQH 386
EE E P +H
Sbjct: 183 EEGEFTSPPGTHAEH 197
>AK074899-1|BAC11278.1| 470|Homo sapiens protein ( Homo sapiens
cDNA FLJ90418 fis, clone NT2RP3000172, weakly similar to
CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE TYPE I (EC
2.7.1.123). ).
Length = 470
Score = 31.9 bits (69), Expect = 1.6
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 343 EKKNFNLPQPKMANTDLSRLLKSEEIRKVLRAPNK 447
+KKN+N P DL +++K+EE ++ RA +K
Sbjct: 10 DKKNYNQPSEVTDRYDLGQVIKTEEFCEIFRAKDK 44
>AK074856-1|BAC11248.1| 501|Homo sapiens protein ( Homo sapiens
cDNA FLJ90375 fis, clone NT2RP2004670, highly similar to
Rattus norvegicus vesicla-associate calmodulin-binding
protein ).
Length = 501
Score = 31.9 bits (69), Expect = 1.6
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 343 EKKNFNLPQPKMANTDLSRLLKSEEIRKVLRAPNK 447
+KKN+N P DL +++K+EE ++ RA +K
Sbjct: 10 DKKNYNQPSEVTDRYDLGQVIKTEEFCEIFRAKDK 44
>AL645608-9|CAI15571.2| 676|Homo sapiens chromosome 1 open reading
frame 170 protein.
Length = 676
Score = 28.3 bits (60), Expect(2) = 1.7
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 342 GEEELQPAPAEDGQHRPQPSAEVRRDPQGP 431
G+EEL P PA G P P + V+ D GP
Sbjct: 110 GQEELGPGPA--GAPEPGPRSPVQEDRPGP 137
Score = 22.2 bits (45), Expect(2) = 1.7
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +3
Query: 189 PQHPWHRDAQREQAEPPEAGTRRPSRQ 269
P+ P H + + P A R PSR+
Sbjct: 43 PKSPGHSTGSQRPPDSPGAPPRSPSRK 69
>AK123855-1|BAC85711.1| 676|Homo sapiens protein ( Homo sapiens
cDNA FLJ41861 fis, clone NTONG2008672. ).
Length = 676
Score = 28.3 bits (60), Expect(2) = 1.7
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 342 GEEELQPAPAEDGQHRPQPSAEVRRDPQGP 431
G+EEL P PA G P P + V+ D GP
Sbjct: 110 GQEELGPGPA--GAPEPGPRSPVQEDRPGP 137
Score = 22.2 bits (45), Expect(2) = 1.7
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +3
Query: 189 PQHPWHRDAQREQAEPPEAGTRRPSRQ 269
P+ P H + + P A R PSR+
Sbjct: 43 PKSPGHSTGSQRPPDSPGAPPRSPSRK 69
>BC110997-1|AAI10998.1| 916|Homo sapiens coiled-coil domain
containing 57 protein.
Length = 916
Score = 31.1 bits (67), Expect = 2.8
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +1
Query: 340 KEKKNFNLPQPKMANTDLSRLLKSEEIRKVLRAPNKRVVRATRKLN--PLTNTKAMLKLN 513
K + F L M+NT LSR LK + + K L A + +A L TN + KL
Sbjct: 184 KREHEFRLQADNMSNTALSRELKVKLLHKELEALKEAGAKAAESLQRAEATNAELERKLQ 243
Query: 514 PYAAVLRRKAVLEQVR 561
A L+ + + R
Sbjct: 244 SRAGELQDLEAMSRAR 259
>BC040264-1|AAH40264.1| 751|Homo sapiens coiled-coil domain
containing 57 protein.
Length = 751
Score = 31.1 bits (67), Expect = 2.8
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +1
Query: 340 KEKKNFNLPQPKMANTDLSRLLKSEEIRKVLRAPNKRVVRATRKLN--PLTNTKAMLKLN 513
K + F L M+NT LSR LK + + K L A + +A L TN + KL
Sbjct: 184 KREHEFRLQADNMSNTALSRELKVKLLHKELEALKEAGAKAAESLQRAEATNAELERKLQ 243
Query: 514 PYAAVLRRKAVLEQVR 561
A L+ + + R
Sbjct: 244 SRAGELQDLEAMSRAR 259
>AK027410-1|BAB55094.1| 504|Homo sapiens protein ( Homo sapiens
cDNA FLJ14504 fis, clone NT2RM1000272. ).
Length = 504
Score = 31.1 bits (67), Expect = 2.8
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +3
Query: 318 RLVEDTIEGEEELQPAPAEDGQHRPQPSAEVRRDPQGPA 434
R ED I+ EE +P P E G + R P GPA
Sbjct: 397 RAPEDVIQALEEKKPTPKESGNRQELARGPQERTPCGPA 435
>AB202097-1|BAE78617.1| 2089|Homo sapiens mediator of DNA damage
checkpoint 1 protein.
Length = 2089
Score = 31.1 bits (67), Expect = 2.8
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Frame = +3
Query: 231 EP-PEAGTRRPSRQVHHLDQVRFR*A*PAVRLVEDTIEGEEELQPAPAEDGQHRPQPSAE 407
EP P T +P R R +V+ E + ELQP+ + D P+P+++
Sbjct: 1126 EPHPSTSTAQPVTPKPTSQATRSRTNRSSVKTPEPVVPTAPELQPSTSTDQPVTPEPTSQ 1185
Query: 408 VR--RDPQGPARAQQACC*SDTEIEPADQYEGDVEAEP 515
V R + + + + E++P+ + V +EP
Sbjct: 1186 VTRGRKSRSSVKTPETVVPTALELQPSTSTDRPVTSEP 1223
>U50822-1|AAA93480.1| 356|Homo sapiens NEUROD protein.
Length = 356
Score = 30.7 bits (66), Expect = 3.7
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3
Query: 420 PQGPARAQQACC*SDTEIEPADQYEGDVEAEPVRRGAETEGGSRTGQEE 566
PQGP C S E AD+ E D+EA + GG ++E
Sbjct: 16 PQGPPSWTDECLSSQDEEHEADKKEDDLEAMNAEEDSLRNGGEEEDEDE 64
>D82347-1|BAA11558.1| 356|Homo sapiens NeuroD protein.
Length = 356
Score = 30.7 bits (66), Expect = 3.7
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3
Query: 420 PQGPARAQQACC*SDTEIEPADQYEGDVEAEPVRRGAETEGGSRTGQEE 566
PQGP C S E AD+ E D+EA + GG ++E
Sbjct: 16 PQGPPSWTDECLSSQDEEHEADKKEDDLEAMNAEEDSLRNGGEEEDEDE 64
>BC050603-1|AAH50603.1| 562|Homo sapiens methyltransferase 10
domain containing protein.
Length = 562
Score = 30.7 bits (66), Expect = 3.7
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +3
Query: 318 RLVEDTIEGEEELQPAPAEDGQHRPQPSAEVRRDPQGPA 434
R ED I+ EE +P P E G + R P GPA
Sbjct: 397 RAPEDVIQALEEKKPTPKESGNSQELARGPQERTPCGPA 435
>BC009046-1|AAH09046.1| 356|Homo sapiens neurogenic differentiation
1 protein.
Length = 356
Score = 30.7 bits (66), Expect = 3.7
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3
Query: 420 PQGPARAQQACC*SDTEIEPADQYEGDVEAEPVRRGAETEGGSRTGQEE 566
PQGP C S E AD+ E D+EA + GG ++E
Sbjct: 16 PQGPPSWTDECLSSQDEEHEADKKEDDLEAMNAEEDSLRNGGEEEDEDE 64
>AF045152-1|AAC83145.1| 356|Homo sapiens neurogenic differentiation
factor 1 protein.
Length = 356
Score = 30.7 bits (66), Expect = 3.7
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3
Query: 420 PQGPARAQQACC*SDTEIEPADQYEGDVEAEPVRRGAETEGGSRTGQEE 566
PQGP C S E AD+ E D+EA + GG ++E
Sbjct: 16 PQGPPSWTDECLSSQDEEHEADKKEDDLEAMNAEEDSLRNGGEEEDEDE 64
>AB018693-1|BAA76603.1| 356|Homo sapiens NeuroD protein.
Length = 356
Score = 30.7 bits (66), Expect = 3.7
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3
Query: 420 PQGPARAQQACC*SDTEIEPADQYEGDVEAEPVRRGAETEGGSRTGQEE 566
PQGP C S E AD+ E D+EA + GG ++E
Sbjct: 16 PQGPPSWTDECLSSQDEEHEADKKEDDLEAMNAEEDSLRNGGEEEDEDE 64
>AB016079-1|BAA36519.1| 356|Homo sapiens BETA2 protein.
Length = 356
Score = 30.7 bits (66), Expect = 3.7
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3
Query: 420 PQGPARAQQACC*SDTEIEPADQYEGDVEAEPVRRGAETEGGSRTGQEE 566
PQGP C S E AD+ E D+EA + GG ++E
Sbjct: 16 PQGPPSWTDECLSSQDEEHEADKKEDDLEAMNAEEDSLRNGGEEEDEDE 64
>AB009997-1|BAA87605.1| 356|Homo sapiens NeuroD protein.
Length = 356
Score = 30.7 bits (66), Expect = 3.7
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3
Query: 420 PQGPARAQQACC*SDTEIEPADQYEGDVEAEPVRRGAETEGGSRTGQEE 566
PQGP C S E AD+ E D+EA + GG ++E
Sbjct: 16 PQGPPSWTDECLSSQDEEHEADKKEDDLEAMNAEEDSLRNGGEEEDEDE 64
>AY367050-1|AAR15506.1| 550|Homo sapiens NOEL1C protein.
Length = 550
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 123 SSCPTQRTPYHL**GQGSDSCIPQHPWHRDAQREQAEPPEAGT-RRPSRQVHHL 281
SSCP + P G SD P+ P D++RE P T P+ HL
Sbjct: 161 SSCPQELNPAWSVAGNASDGEPPESPHAEDSERESVTTPGPATCGAPASPADHL 214
>AY280969-1|AAQ18787.1| 504|Homo sapiens no Rab11-binding protein
1B protein.
Length = 504
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 123 SSCPTQRTPYHL**GQGSDSCIPQHPWHRDAQREQAEPPEAGT-RRPSRQVHHL 281
SSCP + P G SD P+ P D++RE P T P+ HL
Sbjct: 161 SSCPQELNPAWSVAGNASDGEPPESPHAEDSERESVTTPGPATCGAPASPADHL 214
>AY280968-1|AAQ18786.1| 1283|Homo sapiens Rab11-family interacting
protein 1B protein.
Length = 1283
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 123 SSCPTQRTPYHL**GQGSDSCIPQHPWHRDAQREQAEPPEAGT-RRPSRQVHHL 281
SSCP + P G SD P+ P D++RE P T P+ HL
Sbjct: 832 SSCPQELNPAWSVAGNASDGEPPESPHAEDSERESVTTPGPATCGAPASPADHL 885
>AY280967-1|AAQ18785.1| 504|Homo sapiens no Rab11-binding protein
1A protein.
Length = 504
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 123 SSCPTQRTPYHL**GQGSDSCIPQHPWHRDAQREQAEPPEAGT-RRPSRQVHHL 281
SSCP + P G SD P+ P D++RE P T P+ HL
Sbjct: 161 SSCPQELNPAWSVAGNASDGEPPESPHAEDSERESVTTPGPATCGAPASPADHL 214
>AY280966-1|AAQ18784.1| 612|Homo sapiens Rab11-family interacting
protein 1A protein.
Length = 612
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 123 SSCPTQRTPYHL**GQGSDSCIPQHPWHRDAQREQAEPPEAGT-RRPSRQVHHL 281
SSCP + P G SD P+ P D++RE P T P+ HL
Sbjct: 161 SSCPQELNPAWSVAGNASDGEPPESPHAEDSERESVTTPGPATCGAPASPADHL 214
>AK122583-1|BAC56924.1| 681|Homo sapiens FLJ00294 protein protein.
Length = 681
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 123 SSCPTQRTPYHL**GQGSDSCIPQHPWHRDAQREQAEPPEAGT-RRPSRQVHHL 281
SSCP + P G SD P+ P D++RE P T P+ HL
Sbjct: 230 SSCPQELNPAWSVAGNASDGEPPESPHAEDSERESVTTPGPATCGAPASPADHL 283
>AK090437-1|BAC03418.1| 469|Homo sapiens FLJ00355 protein protein.
Length = 469
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 123 SSCPTQRTPYHL**GQGSDSCIPQHPWHRDAQREQAEPPEAGT-RRPSRQVHHL 281
SSCP + P G SD P+ P D++RE P T P+ HL
Sbjct: 80 SSCPQELNPAWSVAGNASDGEPPESPHAEDSERESVTTPGPATCGAPASPADHL 133
>AL590383-2|CAH71374.2| 2279|Homo sapiens zinc finger protein 318
protein.
Length = 2279
Score = 29.9 bits (64), Expect = 6.5
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 9/74 (12%)
Frame = +1
Query: 322 SWKTPSKEKKNFNLPQPKMANTDLSRLLKSEEIRKV---------LRAPNKRVVRATRKL 474
SWK P KE++ +L P ++ ++ K +E K ++ K VV T
Sbjct: 1277 SWKKPEKEEEKSSLVTPSISKEEILESSKDKEDGKTEAGKAKPIKIKLSGKTVVAHTSPW 1336
Query: 475 NPLTNTKAMLKLNP 516
P+ T K+ P
Sbjct: 1337 MPVVTTSTQTKIRP 1350
>AL583834-6|CAI14459.2| 2279|Homo sapiens zinc finger protein 318
protein.
Length = 2279
Score = 29.9 bits (64), Expect = 6.5
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 9/74 (12%)
Frame = +1
Query: 322 SWKTPSKEKKNFNLPQPKMANTDLSRLLKSEEIRKV---------LRAPNKRVVRATRKL 474
SWK P KE++ +L P ++ ++ K +E K ++ K VV T
Sbjct: 1277 SWKKPEKEEEKSSLVTPSISKEEILESSKDKEDGKTEAGKAKPIKIKLSGKTVVAHTSPW 1336
Query: 475 NPLTNTKAMLKLNP 516
P+ T K+ P
Sbjct: 1337 MPVVTTSTQTKIRP 1350
>AF121141-1|AAD17298.1| 2099|Homo sapiens endocrine regulator protein.
Length = 2099
Score = 29.9 bits (64), Expect = 6.5
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 9/74 (12%)
Frame = +1
Query: 322 SWKTPSKEKKNFNLPQPKMANTDLSRLLKSEEIRKV---------LRAPNKRVVRATRKL 474
SWK P KE++ +L P ++ ++ K +E K ++ K VV T
Sbjct: 1097 SWKKPEKEEEKSSLVTPSISKEEILESSKDKEDGKTEAGKAKPIKIKLSGKTVVAHTSPW 1156
Query: 475 NPLTNTKAMLKLNP 516
P+ T K+ P
Sbjct: 1157 MPVVTTSTQTKIGP 1170
>AF090114-1|AAD47387.1| 2099|Homo sapiens unknown protein.
Length = 2099
Score = 29.9 bits (64), Expect = 6.5
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 9/74 (12%)
Frame = +1
Query: 322 SWKTPSKEKKNFNLPQPKMANTDLSRLLKSEEIRKV---------LRAPNKRVVRATRKL 474
SWK P KE++ +L P ++ ++ K +E K ++ K VV T
Sbjct: 1097 SWKKPEKEEEKSSLVTPSISKEEILESSKDKEDGKTEAGKAKPIKIKLSGKTVVAHTSPW 1156
Query: 475 NPLTNTKAMLKLNP 516
P+ T K+ P
Sbjct: 1157 MPVVTTSTQTKIGP 1170
>AY965853-1|AAX77219.1| 2461|Homo sapiens SMRTE-tau protein.
Length = 2461
Score = 29.5 bits (63), Expect = 8.6
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Frame = +3
Query: 339 EGEEELQPAP-AEDGQHRPQPSAEVRRDPQGPARAQ-QACC*SDTEIEPA---DQYEGDV 503
E EEE AP E+G+ + P+AE G A ++ C + E PA D +
Sbjct: 808 EKEEETAAAPPVEEGEEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEAAEA 867
Query: 504 EAEPVRRGAETEGGS 548
AE + + EGGS
Sbjct: 868 TAERALKAEKKEGGS 882
>AL593848-11|CAI17258.1| 1371|Homo sapiens ADAM metallopeptidase with
thrombospondin type 1 motif, 13 protein.
Length = 1371
Score = 29.5 bits (63), Expect = 8.6
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 330 DTIEGEEELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQAC 452
DT G + P PA+ QH P+P VR GP Q AC
Sbjct: 1097 DTCLGPQAQAPVPADFCQHLPKP-VTVRGCWAGPCVGQGAC 1136
>AL593848-9|CAI17257.1| 1340|Homo sapiens ADAM metallopeptidase with
thrombospondin type 1 motif, 13 protein.
Length = 1340
Score = 29.5 bits (63), Expect = 8.6
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 330 DTIEGEEELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQAC 452
DT G + P PA+ QH P+P VR GP Q AC
Sbjct: 1066 DTCLGPQAQAPVPADFCQHLPKP-VTVRGCWAGPCVGQGAC 1105
>AL158826-24|CAI12851.1| 1371|Homo sapiens ADAM metallopeptidase with
thrombospondin type 1 motif, 13 protein.
Length = 1371
Score = 29.5 bits (63), Expect = 8.6
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 330 DTIEGEEELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQAC 452
DT G + P PA+ QH P+P VR GP Q AC
Sbjct: 1097 DTCLGPQAQAPVPADFCQHLPKP-VTVRGCWAGPCVGQGAC 1136
>AL158826-22|CAI12852.1| 1340|Homo sapiens ADAM metallopeptidase with
thrombospondin type 1 motif, 13 protein.
Length = 1340
Score = 29.5 bits (63), Expect = 8.6
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 330 DTIEGEEELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQAC 452
DT G + P PA+ QH P+P VR GP Q AC
Sbjct: 1066 DTCLGPQAQAPVPADFCQHLPKP-VTVRGCWAGPCVGQGAC 1105
>AK124447-1|BAC85854.1| 434|Homo sapiens protein ( Homo sapiens
cDNA FLJ42456 fis, clone BRACE2016981. ).
Length = 434
Score = 29.5 bits (63), Expect = 8.6
Identities = 23/76 (30%), Positives = 28/76 (36%)
Frame = +3
Query: 339 EGEEELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPADQYEGDVEAEPV 518
E E+EL A AE R A Q+ C E+E ++ GD E E
Sbjct: 188 EIEQELHLAQAEIQSLRQAAEDSATEHESDIASLQEDLCRMQNELEDMERIRGDYEMEIA 247
Query: 519 RRGAETEGGSRTGQEE 566
AE E S EE
Sbjct: 248 SLRAEMEMKSSEPSEE 263
>AJ420810-1|CAD12729.1| 1371|Homo sapiens ADAMTS-13 protein, variant 2
protein.
Length = 1371
Score = 29.5 bits (63), Expect = 8.6
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 330 DTIEGEEELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQAC 452
DT G + P PA+ QH P+P VR GP Q AC
Sbjct: 1097 DTCLGPQAQAPVPADFCQHLPKP-VTVRGCWAGPCVGQGAC 1136
>AJ305314-1|CAC83682.1| 1340|Homo sapiens ADAMTS-13 protein protein.
Length = 1340
Score = 29.5 bits (63), Expect = 8.6
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 330 DTIEGEEELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQAC 452
DT G + P PA+ QH P+P VR GP Q AC
Sbjct: 1066 DTCLGPQAQAPVPADFCQHLPKP-VTVRGCWAGPCVGQGAC 1105
>AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing 4
protein.
Length = 1362
Score = 29.5 bits (63), Expect = 8.6
Identities = 23/86 (26%), Positives = 32/86 (37%)
Frame = +3
Query: 189 PQHPWHRDAQREQAEPPEAGTRRPSRQVHHLDQVRFR*A*PAVRLVEDTIEGEEELQPAP 368
P HP + ++Q PP +P Q H R V L ++ +Q P
Sbjct: 961 PPHPSVQQQLQQQPPPPPPPQPQPPPQQQHQPPPR------PVHL--QPMQFSTHIQQPP 1012
Query: 369 AEDGQHRPQPSAEVRRDPQGPARAQQ 446
GQ P P + P PA+ QQ
Sbjct: 1013 PPQGQQPPHPPPGQQPPPPQPAKPQQ 1038
>AF125672-1|AAD22973.1| 2507|Homo sapiens silencing mediator of
retinoic acid and thyroid hormone receptor extended isofo
protein.
Length = 2507
Score = 29.5 bits (63), Expect = 8.6
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Frame = +3
Query: 339 EGEEELQPAP-AEDGQHRPQPSAEVRRDPQGPARAQ-QACC*SDTEIEPA---DQYEGDV 503
E EEE AP E+G+ + P+AE G A ++ C + E PA D +
Sbjct: 808 EKEEETAAAPPVEEGEEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEAAEA 867
Query: 504 EAEPVRRGAETEGGS 548
AE + + EGGS
Sbjct: 868 TAERALKAEKKEGGS 882
>AF113003-1|AAD20946.1| 2517|Homo sapiens silencing mediator of
retinoic acid and thyroid hormone receptor alpha protein.
Length = 2517
Score = 29.5 bits (63), Expect = 8.6
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Frame = +3
Query: 339 EGEEELQPAP-AEDGQHRPQPSAEVRRDPQGPARAQ-QACC*SDTEIEPA---DQYEGDV 503
E EEE AP E+G+ + P+AE G A ++ C + E PA D +
Sbjct: 826 EKEEETAAAPPVEEGEEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEAAEA 885
Query: 504 EAEPVRRGAETEGGS 548
AE + + EGGS
Sbjct: 886 TAEGALKAEKKEGGS 900
>AB209999-1|BAE06081.1| 1731|Homo sapiens JARID1A variant protein
protein.
Length = 1731
Score = 29.5 bits (63), Expect = 8.6
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +1
Query: 286 KSAFDRLDPLFGSWKTPSKEKKNFNLPQPKMANTDLSRLLKSEEIRKVLRAPNKRVVRAT 465
K ++++ LFG K SKE K + P+ K KS+E+ K+ + K R
Sbjct: 1548 KRKLEKVEQLFGEGKQKSKELKKMDKPRKKKLKLGAD---KSKELNKLAKKLAKEEERKK 1604
Query: 466 RK 471
+K
Sbjct: 1605 KK 1606
>AB209089-1|BAD92326.1| 1469|Homo sapiens nuclear receptor
co-repressor 2 variant protein.
Length = 1469
Score = 29.5 bits (63), Expect = 8.6
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Frame = +3
Query: 339 EGEEELQPAP-AEDGQHRPQPSAEVRRDPQGPARAQ-QACC*SDTEIEPA---DQYEGDV 503
E EEE AP E+G+ + P+AE G A ++ C + E PA D +
Sbjct: 844 EKEEETAAAPPVEEGEEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEAAEA 903
Query: 504 EAEPVRRGAETEGGS 548
AE + + EGGS
Sbjct: 904 TAEGALKAEKKEGGS 918
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,059,461
Number of Sequences: 237096
Number of extensions: 1516556
Number of successful extensions: 6645
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 6108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6613
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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