Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_E09
(567 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000196-2|AAC24253.1| 345|Caenorhabditis elegans Ribosomal pro... 189 1e-48
Z68338-4|CAE48509.1| 104|Caenorhabditis elegans Hypothetical pr... 31 0.58
U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein ... 30 1.0
U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein ... 30 1.0
U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein. 30 1.0
U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein. 30 1.0
U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with ta... 30 1.0
U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with ta... 30 1.0
U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with ta... 30 1.0
Z69661-3|CAA93490.1| 293|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 2.3
AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin... 27 7.1
Z69637-7|CAO78728.1| 433|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z69637-1|CAA93467.1| 601|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z68338-3|CAA92760.2| 105|Caenorhabditis elegans Hypothetical pr... 27 9.4
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 27 9.4
>AF000196-2|AAC24253.1| 345|Caenorhabditis elegans Ribosomal
protein, large subunitprotein 4 protein.
Length = 345
Score = 189 bits (460), Expect = 1e-48
Identities = 88/176 (50%), Positives = 122/176 (69%), Gaps = 1/176 (0%)
Frame = +1
Query: 13 KTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLTRAFR 192
KTK+AV+FLRR + W+D+ KVY S+R RAGKGK+RNR+ Q+ GP++IY +D RAFR
Sbjct: 162 KTKEAVVFLRRSHLWADIEKVYNSKRNRAGKGKLRNRQHKQKLGPVVIYGQDAECARAFR 221
Query: 193 NIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKE-KKNFNLPQ 369
NIPG+++ APGGHLGR IIWT+SAF +LD ++G+ S + KK +++P
Sbjct: 222 NIPGVDVMNVERLNLLKLAPGGHLGRLIIWTESAFKKLDTIYGTTVANSSQLKKGWSVPL 281
Query: 370 PKMANTDLSRLLKSEEIRKVLRAPNKRVVRATRKLNPLTNTKAMLKLNPYAAVLRR 537
P MAN+D SR+++SEE+ K +RAP K V NPL + KLNPYA++LR+
Sbjct: 282 PIMANSDFSRIIRSEEVVKAIRAPKKNPVLPKVHRNPLKKRTLLYKLNPYASILRK 337
>Z68338-4|CAE48509.1| 104|Caenorhabditis elegans Hypothetical
protein T24B8.3b protein.
Length = 104
Score = 31.1 bits (67), Expect = 0.58
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +3
Query: 363 APAEDGQHRPQPSAEVRRDPQGPARAQ-QACC*SDTEIEPADQYEGDVEAEPVRRGAETE 539
A E+G+ +P+ +V +D +G + + E+ D EG+ E G E
Sbjct: 29 ARIENGKTEEEPAEKVTKDAEGEEEGDDEDADDEEDEVNDEDSSEGEGEGSDAGEGEEGS 88
Query: 540 GGSRTGQE 563
G G+E
Sbjct: 89 GDDEDGEE 96
>U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein
protein.
Length = 413
Score = 30.3 bits (65), Expect = 1.0
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +3
Query: 339 EGEEELQPAPAEDGQHRPQPSAEVRRDPQ-GPARAQQACC*SDTEIEPADQYEGDVEAEP 515
E E E +P P + + P+P EV PQ P Q + E+EP + E E EP
Sbjct: 45 EPEPEPEPEPEPEPEPEPKPKPEVEPVPQPEPEPEYQPEPEPEPEVEPEPEPEPVPEPEP 104
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +3
Query: 327 EDTIEGEEELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPADQYEGDVE 506
E +E E E +P P + + P+P E P+ P + E +P + E +VE
Sbjct: 33 EVAVEPEPEPEPEPEPEPEPEPEPEPEPEPKPK-PEVEPVPQPEPEPEYQPEPEPEPEVE 91
Query: 507 AEP 515
EP
Sbjct: 92 PEP 94
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = +3
Query: 324 VEDTIEGEEELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPADQYEGDV 503
VE E E E +P P + + P+P + + + + P + E EP + E +
Sbjct: 36 VEPEPEPEPEPEPEPEPEPEPEPEPEPKPKPEVE-PVPQPEPEPEYQPEPEPEPEVEPEP 94
Query: 504 EAEPV 518
E EPV
Sbjct: 95 EPEPV 99
>U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein
protein.
Length = 453
Score = 30.3 bits (65), Expect = 1.0
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +3
Query: 339 EGEEELQPAPAEDGQHRPQPSAEVRRDPQ-GPARAQQACC*SDTEIEPADQYEGDVEAEP 515
E E E +P P + + P+P EV PQ P Q + E+EP + E E EP
Sbjct: 45 EPEPEPEPEPEPEPEPEPKPKPEVEPVPQPEPEPEYQPEPEPEPEVEPEPEPEPVPEPEP 104
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +3
Query: 327 EDTIEGEEELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPADQYEGDVE 506
E +E E E +P P + + P+P E P+ P + E +P + E +VE
Sbjct: 33 EVAVEPEPEPEPEPEPEPEPEPEPEPEPEPKPK-PEVEPVPQPEPEPEYQPEPEPEPEVE 91
Query: 507 AEP 515
EP
Sbjct: 92 PEP 94
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = +3
Query: 324 VEDTIEGEEELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPADQYEGDV 503
VE E E E +P P + + P+P + + + + P + E EP + E +
Sbjct: 36 VEPEPEPEPEPEPEPEPEPEPEPEPEPKPKPEVE-PVPQPEPEPEYQPEPEPEPEVEPEP 94
Query: 504 EAEPV 518
E EPV
Sbjct: 95 EPEPV 99
>U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein.
Length = 436
Score = 30.3 bits (65), Expect = 1.0
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +3
Query: 339 EGEEELQPAPAEDGQHRPQPSAEVRRDPQ-GPARAQQACC*SDTEIEPADQYEGDVEAEP 515
E E E +P P + + P+P EV PQ P Q + E+EP + E E EP
Sbjct: 23 EPEPEPEPEPEPEPEPEPKPKPEVEPVPQPEPEPEYQPEPEPEPEVEPEPEPEPVPEPEP 82
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +3
Query: 327 EDTIEGEEELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPADQYEGDVE 506
E +E E E +P P + + P+P E P+ P + E +P + E +VE
Sbjct: 11 EVAVEPEPEPEPEPEPEPEPEPEPEPEPEPKPK-PEVEPVPQPEPEPEYQPEPEPEPEVE 69
Query: 507 AEP 515
EP
Sbjct: 70 PEP 72
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = +3
Query: 324 VEDTIEGEEELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPADQYEGDV 503
VE E E E +P P + + P+P + + + + P + E EP + E +
Sbjct: 14 VEPEPEPEPEPEPEPEPEPEPEPEPEPKPKPEVE-PVPQPEPEPEYQPEPEPEPEVEPEP 72
Query: 504 EAEPV 518
E EPV
Sbjct: 73 EPEPV 77
>U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein.
Length = 431
Score = 30.3 bits (65), Expect = 1.0
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +3
Query: 339 EGEEELQPAPAEDGQHRPQPSAEVRRDPQ-GPARAQQACC*SDTEIEPADQYEGDVEAEP 515
E E E +P P + + P+P EV PQ P Q + E+EP + E E EP
Sbjct: 23 EPEPEPEPEPEPEPEPEPKPKPEVEPVPQPEPEPEYQPEPEPEPEVEPEPEPEPVPEPEP 82
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +3
Query: 327 EDTIEGEEELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPADQYEGDVE 506
E +E E E +P P + + P+P E P+ P + E +P + E +VE
Sbjct: 11 EVAVEPEPEPEPEPEPEPEPEPEPEPEPEPKPK-PEVEPVPQPEPEPEYQPEPEPEPEVE 69
Query: 507 AEP 515
EP
Sbjct: 70 PEP 72
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = +3
Query: 324 VEDTIEGEEELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPADQYEGDV 503
VE E E E +P P + + P+P + + + + P + E EP + E +
Sbjct: 14 VEPEPEPEPEPEPEPEPEPEPEPEPEPKPKPEVE-PVPQPEPEPEYQPEPEPEPEVEPEP 72
Query: 504 EAEPV 518
E EPV
Sbjct: 73 EPEPV 77
>U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform a protein.
Length = 453
Score = 30.3 bits (65), Expect = 1.0
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +3
Query: 339 EGEEELQPAPAEDGQHRPQPSAEVRRDPQ-GPARAQQACC*SDTEIEPADQYEGDVEAEP 515
E E E +P P + + P+P EV PQ P Q + E+EP + E E EP
Sbjct: 45 EPEPEPEPEPEPEPEPEPKPKPEVEPVPQPEPEPEYQPEPEPEPEVEPEPEPEPVPEPEP 104
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +3
Query: 327 EDTIEGEEELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPADQYEGDVE 506
E +E E E +P P + + P+P E P+ P + E +P + E +VE
Sbjct: 33 EVAVEPEPEPEPEPEPEPEPEPEPEPEPEPKPK-PEVEPVPQPEPEPEYQPEPEPEPEVE 91
Query: 507 AEP 515
EP
Sbjct: 92 PEP 94
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = +3
Query: 324 VEDTIEGEEELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPADQYEGDV 503
VE E E E +P P + + P+P + + + + P + E EP + E +
Sbjct: 36 VEPEPEPEPEPEPEPEPEPEPEPEPEPKPKPEVE-PVPQPEPEPEYQPEPEPEPEVEPEP 94
Query: 504 EAEPV 518
E EPV
Sbjct: 95 EPEPV 99
>U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform c protein.
Length = 413
Score = 30.3 bits (65), Expect = 1.0
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +3
Query: 339 EGEEELQPAPAEDGQHRPQPSAEVRRDPQ-GPARAQQACC*SDTEIEPADQYEGDVEAEP 515
E E E +P P + + P+P EV PQ P Q + E+EP + E E EP
Sbjct: 45 EPEPEPEPEPEPEPEPEPKPKPEVEPVPQPEPEPEYQPEPEPEPEVEPEPEPEPVPEPEP 104
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +3
Query: 327 EDTIEGEEELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPADQYEGDVE 506
E +E E E +P P + + P+P E P+ P + E +P + E +VE
Sbjct: 33 EVAVEPEPEPEPEPEPEPEPEPEPEPEPEPKPK-PEVEPVPQPEPEPEYQPEPEPEPEVE 91
Query: 507 AEP 515
EP
Sbjct: 92 PEP 94
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = +3
Query: 324 VEDTIEGEEELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPADQYEGDV 503
VE E E E +P P + + P+P + + + + P + E EP + E +
Sbjct: 36 VEPEPEPEPEPEPEPEPEPEPEPEPEPKPKPEVE-PVPQPEPEPEYQPEPEPEPEVEPEP 94
Query: 504 EAEPV 518
E EPV
Sbjct: 95 EPEPV 99
>U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform b protein.
Length = 458
Score = 30.3 bits (65), Expect = 1.0
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +3
Query: 339 EGEEELQPAPAEDGQHRPQPSAEVRRDPQ-GPARAQQACC*SDTEIEPADQYEGDVEAEP 515
E E E +P P + + P+P EV PQ P Q + E+EP + E E EP
Sbjct: 45 EPEPEPEPEPEPEPEPEPKPKPEVEPVPQPEPEPEYQPEPEPEPEVEPEPEPEPVPEPEP 104
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +3
Query: 327 EDTIEGEEELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPADQYEGDVE 506
E +E E E +P P + + P+P E P+ P + E +P + E +VE
Sbjct: 33 EVAVEPEPEPEPEPEPEPEPEPEPEPEPEPKPK-PEVEPVPQPEPEPEYQPEPEPEPEVE 91
Query: 507 AEP 515
EP
Sbjct: 92 PEP 94
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = +3
Query: 324 VEDTIEGEEELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPADQYEGDV 503
VE E E E +P P + + P+P + + + + P + E EP + E +
Sbjct: 36 VEPEPEPEPEPEPEPEPEPEPEPEPEPKPKPEVE-PVPQPEPEPEYQPEPEPEPEVEPEP 94
Query: 504 EAEPV 518
E EPV
Sbjct: 95 EPEPV 99
>Z69661-3|CAA93490.1| 293|Caenorhabditis elegans Hypothetical
protein F48F7.5 protein.
Length = 293
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 336 IEGEEELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPADQYEGD-VEAE 512
+E E+E + A ++G+ ++V + + ++ DTE E D+YE D VE E
Sbjct: 214 VEEEDEDEEADDDNGESTDLEGSDVDENREEKELIDESNDSDDTEFEEEDEYETDYVEDE 273
Query: 513 P 515
P
Sbjct: 274 P 274
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 198 PWHRDAQREQAEPPEAGTRRPSRQ 269
PW+ EPP G+RRPS+Q
Sbjct: 802 PWYSRDPIVNPEPPSVGSRRPSKQ 825
>AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin
related protein 2 protein.
Length = 1335
Score = 27.5 bits (58), Expect = 7.1
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = -2
Query: 365 GRLKFFFSFDGVFHEPNSGSSLSKADLVQMMNLPRWPPGASFRRFSLFTLSISMPGMLRN 186
G++ FF + + L+K+ +++P P G SFR ++ S S+ ML
Sbjct: 1268 GKINFFQTSQSFLGMGQAQLKLTKSQPAPTVSVPTTPSGTSFRPRLVWINSKSLTLMLPE 1327
Query: 185 ARVRPLSL 162
R + SL
Sbjct: 1328 GREQRFSL 1335
>Z69637-7|CAO78728.1| 433|Caenorhabditis elegans Hypothetical
protein F35G2.1b protein.
Length = 433
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -2
Query: 305 SLSKADLVQMMNLPRWPPGASFRR 234
+LS + LVQM+N+ +P A FRR
Sbjct: 66 ALSNSPLVQMLNIRNFPTVALFRR 89
>Z69637-1|CAA93467.1| 601|Caenorhabditis elegans Hypothetical
protein F35G2.1a protein.
Length = 601
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -2
Query: 305 SLSKADLVQMMNLPRWPPGASFRR 234
+LS + LVQM+N+ +P A FRR
Sbjct: 234 ALSNSPLVQMLNIRNFPTVALFRR 257
>Z68338-3|CAA92760.2| 105|Caenorhabditis elegans Hypothetical
protein T24B8.3a protein.
Length = 105
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = +3
Query: 363 APAEDGQHRPQPSAEV-RRDPQGPARAQ-QACC*SDTEIEPADQYEGDVEAEPVRRGAET 536
A E+G+ +P+ +V + D +G + + E+ D EG+ E G E
Sbjct: 29 ARIENGKTEEEPAEKVTKEDAEGEEEGDDEDADDEEDEVNDEDSSEGEGEGSDAGEGEEG 88
Query: 537 EGGSRTGQE 563
G G+E
Sbjct: 89 SGDDEDGEE 97
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 27.1 bits (57), Expect = 9.4
Identities = 22/73 (30%), Positives = 29/73 (39%)
Frame = +3
Query: 345 EEELQPAPAEDGQHRPQPSAEVRRDPQGPARAQQACC*SDTEIEPADQYEGDVEAEPVRR 524
EE PAPA + P P+AE P PA A+ A E PA + P +
Sbjct: 630 EETPAPAPAVEETPAPAPAAEETPAP-APAAAEYAA--PVAEETPAPAPAAEETPAPAQA 686
Query: 525 GAETEGGSRTGQE 563
ET + +E
Sbjct: 687 AEETPAPAPAAEE 699
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,521,320
Number of Sequences: 27780
Number of extensions: 226181
Number of successful extensions: 1000
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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