Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_E08
         (233 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    23   1.9  
AY330179-1|AAQ16285.1|  171|Anopheles gambiae odorant-binding pr...    21   4.4  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    21   4.4  
AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.            21   5.8  

>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +2

Query: 128 IIFIPLAIYVIILCDLV**MKCLFICSEI 214
           I F+ + + V+++C  V  +K + IC  I
Sbjct: 187 ITFVLIMLPVVVMCGYVCNLKVMTICCSI 215


>AY330179-1|AAQ16285.1|  171|Anopheles gambiae odorant-binding
          protein AgamOBP53 protein.
          Length = 171

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -3

Query: 87 IYMYHFDFLFFIFVYITYKSLFLK 16
          +Y   F FLF   +Y     LFLK
Sbjct: 3  LYCNEFHFLFMYNIYYRALWLFLK 26


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -2

Query: 67  FFVLYFCLHYLQVTFF 20
           F  +Y C H+   TFF
Sbjct: 144 FSKIYCCCHFSMATFF 159


>AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.
          Length = 438

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = -3

Query: 213 ISEHIKRHFIYYTKSHKIIT*IAKGI 136
           + + +K H + +T+  KI T +A+G+
Sbjct: 203 LCDFLKAHTVSWTELCKIATTMARGL 228


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,976
Number of Sequences: 2352
Number of extensions: 2858
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 52
effective length of database: 441,675
effective search space used: 11041875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)