Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_E06
(346 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060845-1|AAL28393.1| 186|Drosophila melanogaster GM02242p pro... 137 4e-33
AE014298-945|AAN09183.1| 186|Drosophila melanogaster CG3203-PD,... 137 4e-33
AE014298-944|AAF46194.1| 186|Drosophila melanogaster CG3203-PC,... 137 4e-33
AE014298-943|AAN09182.1| 186|Drosophila melanogaster CG3203-PB,... 137 4e-33
AE014298-942|AAF46195.1| 186|Drosophila melanogaster CG3203-PA,... 137 4e-33
AF521598-1|AAN62854.1| 400|Drosophila melanogaster MSP-300/nesp... 28 2.8
AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-P... 28 2.8
BT001338-1|AAN71093.1| 501|Drosophila melanogaster AT21229p pro... 27 8.7
AE014297-4739|AAN14270.1| 501|Drosophila melanogaster CG31003-P... 27 8.7
>AY060845-1|AAL28393.1| 186|Drosophila melanogaster GM02242p
protein.
Length = 186
Score = 137 bits (331), Expect = 4e-33
Identities = 61/76 (80%), Positives = 69/76 (90%)
Frame = +3
Query: 33 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPF 212
MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI+++PLRRA RYLK V ++KEC+PF
Sbjct: 1 MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60
Query: 213 RRFNGGVGRCAQAKQF 260
RRFNGGVGRCAQAKQ+
Sbjct: 61 RRFNGGVGRCAQAKQW 76
Score = 40.3 bits (90), Expect = 7e-04
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 265 TTQGRWPKKSAEFLLQL 315
TTQGRWPKKSAEFLLQL
Sbjct: 78 TTQGRWPKKSAEFLLQL 94
>AE014298-945|AAN09183.1| 186|Drosophila melanogaster CG3203-PD,
isoform D protein.
Length = 186
Score = 137 bits (331), Expect = 4e-33
Identities = 61/76 (80%), Positives = 69/76 (90%)
Frame = +3
Query: 33 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPF 212
MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI+++PLRRA RYLK V ++KEC+PF
Sbjct: 1 MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60
Query: 213 RRFNGGVGRCAQAKQF 260
RRFNGGVGRCAQAKQ+
Sbjct: 61 RRFNGGVGRCAQAKQW 76
Score = 40.3 bits (90), Expect = 7e-04
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 265 TTQGRWPKKSAEFLLQL 315
TTQGRWPKKSAEFLLQL
Sbjct: 78 TTQGRWPKKSAEFLLQL 94
>AE014298-944|AAF46194.1| 186|Drosophila melanogaster CG3203-PC,
isoform C protein.
Length = 186
Score = 137 bits (331), Expect = 4e-33
Identities = 61/76 (80%), Positives = 69/76 (90%)
Frame = +3
Query: 33 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPF 212
MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI+++PLRRA RYLK V ++KEC+PF
Sbjct: 1 MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60
Query: 213 RRFNGGVGRCAQAKQF 260
RRFNGGVGRCAQAKQ+
Sbjct: 61 RRFNGGVGRCAQAKQW 76
Score = 40.3 bits (90), Expect = 7e-04
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 265 TTQGRWPKKSAEFLLQL 315
TTQGRWPKKSAEFLLQL
Sbjct: 78 TTQGRWPKKSAEFLLQL 94
>AE014298-943|AAN09182.1| 186|Drosophila melanogaster CG3203-PB,
isoform B protein.
Length = 186
Score = 137 bits (331), Expect = 4e-33
Identities = 61/76 (80%), Positives = 69/76 (90%)
Frame = +3
Query: 33 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPF 212
MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI+++PLRRA RYLK V ++KEC+PF
Sbjct: 1 MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60
Query: 213 RRFNGGVGRCAQAKQF 260
RRFNGGVGRCAQAKQ+
Sbjct: 61 RRFNGGVGRCAQAKQW 76
Score = 40.3 bits (90), Expect = 7e-04
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 265 TTQGRWPKKSAEFLLQL 315
TTQGRWPKKSAEFLLQL
Sbjct: 78 TTQGRWPKKSAEFLLQL 94
>AE014298-942|AAF46195.1| 186|Drosophila melanogaster CG3203-PA,
isoform A protein.
Length = 186
Score = 137 bits (331), Expect = 4e-33
Identities = 61/76 (80%), Positives = 69/76 (90%)
Frame = +3
Query: 33 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPF 212
MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI+++PLRRA RYLK V ++KEC+PF
Sbjct: 1 MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60
Query: 213 RRFNGGVGRCAQAKQF 260
RRFNGGVGRCAQAKQ+
Sbjct: 61 RRFNGGVGRCAQAKQW 76
Score = 40.3 bits (90), Expect = 7e-04
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 265 TTQGRWPKKSAEFLLQL 315
TTQGRWPKKSAEFLLQL
Sbjct: 78 TTQGRWPKKSAEFLLQL 94
>AF521598-1|AAN62854.1| 400|Drosophila melanogaster MSP-300/nesprin
splice variant protein.
Length = 400
Score = 28.3 bits (60), Expect = 2.8
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +3
Query: 90 SNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRCAQA 251
SNL VH ++ E +KLP A L N T + + RR G+ A A
Sbjct: 288 SNLEVHERDAIELKNQAKKLPTDPATERLLNDTVDRIDLLLRRTQQGITMIANA 341
>AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-PD,
isoform D protein.
Length = 11707
Score = 28.3 bits (60), Expect = 2.8
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +3
Query: 90 SNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRCAQA 251
SNL VH ++ E +KLP A L N T + + RR G+ A A
Sbjct: 7749 SNLEVHERDAIELKNQAKKLPTDPATERLLNDTVDRIDLLLRRTQQGITMIANA 7802
>BT001338-1|AAN71093.1| 501|Drosophila melanogaster AT21229p
protein.
Length = 501
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 207 ECIPSFLSHSLGNGQH 160
E P FL H LGNG H
Sbjct: 409 ESPPGFLQHDLGNGDH 424
>AE014297-4739|AAN14270.1| 501|Drosophila melanogaster CG31003-PA
protein.
Length = 501
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 207 ECIPSFLSHSLGNGQH 160
E P FL H LGNG H
Sbjct: 409 ESPPGFLQHDLGNGDH 424
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,901,112
Number of Sequences: 53049
Number of extensions: 381000
Number of successful extensions: 1091
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1091
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 819378027
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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