Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_E06
         (346 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    21   5.4  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    21   5.4  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    20   7.2  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    20   9.5  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           20   9.5  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    20   9.5  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           20   9.5  

>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +2

Query: 284 PRNLQNSCSNCMRNAESHAD 343
           P  L+N CS C    +  AD
Sbjct: 68  PDALENECSPCSEKQKKIAD 87


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +2

Query: 284 PRNLQNSCSNCMRNAESHAD 343
           P  L+N CS C    +  AD
Sbjct: 68  PDALENECSPCSEKQKKIAD 87


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +2

Query: 140 KKTASSPCCPLPKECDRKEGMH 205
           KK     CC +  +C+  E +H
Sbjct: 459 KKQQGDTCCWVCDQCEEYEYVH 480


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +3

Query: 177 KNVTEKKECIPFRRFNGGVGRCAQAKQFWYH 269
           +NV E   C+ +R     V   A   +F+Y+
Sbjct: 264 RNVKEMIRCLRYRPARAIVETLANFMRFYYN 294


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +3

Query: 177 KNVTEKKECIPFRRFNGGVGRCAQAKQFWYH 269
           +NV E   C+ +R     V   A   +F+Y+
Sbjct: 135 RNVKEMIRCLRYRPARAIVETLANFMRFYYN 165


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 57  PAPESNDPFFISPRRK 10
           P P+ ND   +SP R+
Sbjct: 797 PVPQVNDSTILSPVRE 812


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +3

Query: 177 KNVTEKKECIPFRRFNGGVGRCAQAKQFWYH 269
           +NV E   C+ +R     V   A   +F+Y+
Sbjct: 264 RNVKEMIRCLRYRPARAIVETLANFMRFYYN 294


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,351
Number of Sequences: 438
Number of extensions: 2425
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7812315
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)