Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_E03
(320 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1108 + 30961600-30962013,30963131-30964465 33 0.050
06_01_0691 - 5040280-5040801,5041439-5041529,5042368-5042568,504... 29 0.62
12_01_0088 - 698169-698614,699514-700819,703041-703148 29 0.81
05_06_0186 - 26207298-26208548,26208743-26208853,26209286-262095... 29 1.1
07_03_1156 - 24416835-24417461 28 1.4
02_01_0642 - 4803464-4805665,4806231-4806320 28 1.9
11_06_0763 - 27101764-27104017,27104523-27105055,27106403-27106993 27 2.5
09_04_0007 - 13641012-13641431,13642220-13642312,13642429-136425... 27 2.5
07_01_0008 - 56178-57095 27 2.5
11_01_0560 - 4413174-4414469 27 3.3
03_06_0733 + 35825541-35826052,35826728-35826871,35828638-358287... 27 3.3
11_06_0002 + 19154489-19155172,19155260-19155298 27 4.3
05_06_0225 - 26555217-26555280,26555647-26555713,26555800-265558... 27 4.3
02_05_0226 + 26971851-26972034,26972734-26972834,26972876-269729... 27 4.3
02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-57... 27 4.3
09_04_0300 - 16488358-16488447,16488684-16489116,16489377-164896... 26 5.7
08_02_1458 - 27270834-27271320,27271752-27271961,27272627-272736... 26 5.7
08_01_0650 + 5617578-5618633,5619580-5619735,5619816-5620058 26 5.7
08_01_0051 - 355392-355450,355507-355634,356271-356425,356883-35... 26 5.7
06_01_1201 + 10332105-10332168,10333054-10333571 26 5.7
04_01_0021 + 311914-312399,314218-314310,314391-314672,314754-31... 26 5.7
03_05_0319 - 23064997-23065443 26 5.7
03_05_0317 - 23056409-23056855 26 5.7
03_05_0261 - 22470565-22470714,22472101-22474270,22474368-224745... 26 5.7
12_01_0904 + 8791474-8792261,8792935-8793037,8794009-8794055,879... 26 7.6
10_08_0683 - 19860777-19861070,19861677-19861874,19862498-198626... 26 7.6
10_06_0017 - 9665329-9667642,9672132-9672310 26 7.6
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817 26 7.6
09_01_0178 - 2548611-2548670,2549816-2549918,2549993-2550096,255... 26 7.6
08_01_1015 - 10278480-10278992 26 7.6
06_03_1494 + 30554997-30555608,30555707-30555915,30556006-305561... 26 7.6
06_03_0092 + 16546204-16546693,16546958-16547028,16547145-165472... 26 7.6
03_04_0029 - 16610182-16611753 26 7.6
01_05_0455 + 22387512-22387629,22388344-22388852 26 7.6
>04_04_1108 + 30961600-30962013,30963131-30964465
Length = 582
Score = 33.1 bits (72), Expect = 0.050
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = -1
Query: 194 CEGGEVLPPELSVRTPRVAVPLPSRAS 114
C + LPPEL PR A+PLP RAS
Sbjct: 33 CGMAQALPPELMPPRPRRALPLPGRAS 59
>06_01_0691 -
5040280-5040801,5041439-5041529,5042368-5042568,
5042649-5046148
Length = 1437
Score = 29.5 bits (63), Expect = 0.62
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +2
Query: 161 TARVGAPRRLRRCSVASQVPGIIQTLLNPHLTSPHLTSPHLTSPHLTSP 307
T+ + R +RR +VA+ P L P + PHL PHL SP
Sbjct: 14 TSTSTSSRHIRRATVATAAAAAPDDFDYP-LADPSVRWPHLRFPHLPSP 61
>12_01_0088 - 698169-698614,699514-700819,703041-703148
Length = 619
Score = 29.1 bits (62), Expect = 0.81
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 176 APRRLRRCSV-ASQVPGIIQTLLNPHLTSPHLTSPHLTSPHLTSP 307
A R + RC V A+ P + LL+P L+ P H T H T+P
Sbjct: 265 ARRFIGRCLVDAAHRPSAEELLLDPFLSPPQNHDDHNTIAHATAP 309
>05_06_0186 -
26207298-26208548,26208743-26208853,26209286-26209507,
26209623-26209658
Length = 539
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 62 TMKQWGNAVKLLTKILEEKPSREAELRLVECVPTARVGAPRRL 190
++KQW + +KL + EK E++ C A +G R L
Sbjct: 121 SLKQWSSRLKLALQASPEKSKNESKFTSAACSVPATIGNDRLL 163
>07_03_1156 - 24416835-24417461
Length = 208
Score = 28.3 bits (60), Expect = 1.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +1
Query: 226 HTDPFEPSPHLTSPHLTSPHLTSPHLTSPHL 318
H +P P PH P L P L PH P L
Sbjct: 57 HEEP-PPHPHPAVPELPKPELPPPHPAVPEL 86
>02_01_0642 - 4803464-4805665,4806231-4806320
Length = 763
Score = 27.9 bits (59), Expect = 1.9
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -2
Query: 202 AASAKAARCSHPSCRYALHESQFRFPRGLLLEYLGEQLDRIPPLL 68
A +A RC PSCR HE FR ++ + + + P L+
Sbjct: 12 ATAAAVLRCGSPSCRPVTHE-LFRQKLSFMVSFQAQHMRCAPHLI 55
>11_06_0763 - 27101764-27104017,27104523-27105055,27106403-27106993
Length = 1125
Score = 27.5 bits (58), Expect = 2.5
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 7 GTDLTDTKCDSLRRVALLHDEAVGECGQAA-HQ 102
G +LTDT D L +V +D+A CG HQ
Sbjct: 328 GANLTDTLTDILLQVGAYNDDATPYCGTGTPHQ 360
>09_04_0007 -
13641012-13641431,13642220-13642312,13642429-13642521,
13642607-13642671,13643495-13643565,13643644-13643682,
13644709-13645121
Length = 397
Score = 27.5 bits (58), Expect = 2.5
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 107 LEEKPSREAELRLVECVPTARVGAPRRLRRC 199
L P+ A +R+V V + APRRLR C
Sbjct: 20 LRRWPAAAAGVRIVVAVAPVKARAPRRLRLC 50
>07_01_0008 - 56178-57095
Length = 305
Score = 27.5 bits (58), Expect = 2.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 211 SSTRHHTDPFEPSPHLTSPHLTSPHLTSPH 300
++T H+ P +PS LT+P PH PH
Sbjct: 201 NNTMQHSQPLDPSHLLTTP---PPHRPQPH 227
>11_01_0560 - 4413174-4414469
Length = 431
Score = 27.1 bits (57), Expect = 3.3
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -1
Query: 173 PPELSVRTPRVAVPLPSRASPR 108
PP LS PR+A PSR PR
Sbjct: 264 PPSLSSVFPRIARVFPSRTKPR 285
>03_06_0733 +
35825541-35826052,35826728-35826871,35828638-35828709,
35829232-35829739
Length = 411
Score = 27.1 bits (57), Expect = 3.3
Identities = 10/36 (27%), Positives = 16/36 (44%)
Frame = +1
Query: 208 LSSTRHHTDPFEPSPHLTSPHLTSPHLTSPHLTSPH 315
+S+ HH P P P P + +P +T P+
Sbjct: 36 VSTPHHHPSPLHPLPPPPMPQAPHQYYPAPQITIPY 71
>11_06_0002 + 19154489-19155172,19155260-19155298
Length = 240
Score = 26.6 bits (56), Expect = 4.3
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 164 ARVGAPRRLRRCSVASQVPGIIQTLLNPHLTSPHLTS 274
A APRR R +VP I+ + NP P L S
Sbjct: 46 AAAAAPRRTRPRPFIYRVPNHIKNMTNPDAYRPRLVS 82
>05_06_0225 -
26555217-26555280,26555647-26555713,26555800-26555871,
26557058-26557109,26557250-26557302,26557476-26557535,
26557718-26558075
Length = 241
Score = 26.6 bits (56), Expect = 4.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 147 WSAYRQLGWEHLAAFADAALPLKYPASYRP 236
W + + W HL+A ALPL+ P S P
Sbjct: 12 WPDGQLVWWAHLSARKPPALPLRLPFSRPP 41
>02_05_0226 + 26971851-26972034,26972734-26972834,26972876-26972978,
26973335-26973477,26973525-26973605,26973929-26974015,
26974097-26974239,26974746-26974896,26974973-26975095,
26975362-26975445,26975531-26975718,26976726-26976900,
26977008-26977129,26977231-26977310,26977532-26977590,
26977921-26978075,26978680-26978858,26980050-26980162,
26980243-26980413,26980552-26980680,26980756-26980856,
26980942-26981059,26981739-26981818,26983230-26983302,
26983865-26983950,26984025-26984076,26984221-26984352,
26984560-26984628,26984912-26985004,26985806-26985901,
26986710-26986808,26986894-26986986,26987459-26987608,
26988391-26988549
Length = 1323
Score = 26.6 bits (56), Expect = 4.3
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = +3
Query: 162 QLGWEHLAAFADAALPLKYPASYRPF 239
++GW H++A+ + +++P S PF
Sbjct: 1298 EIGWVHVSAYEKQWMHVRFPPSLPPF 1323
>02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-579174,
579266-579370,579975-580028,580244-580344,580454-581423,
582030-582203,582341-582643,582719-582856,582993-583247,
584230-584370,585008-585289,585395-585540,585627-585690,
585723-585799,586285-586301,587728-587867,587972-588029,
588121-588218,588727-588776,589260-589743
Length = 2630
Score = 26.6 bits (56), Expect = 4.3
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 189 FADAALPLKYPASYRPF*TLTSPHLTSPHLTSPHLTSPHLTS 314
F+ +P+ + +YR PH SPHL + SP+ TS
Sbjct: 2490 FSSTPMPMPH-GTYRA--AGAQPHAPSPHLQQLRMPSPYATS 2528
Score = 25.8 bits (54), Expect = 7.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 245 PHLTSPHLTSPHLTSPHLTS 304
PH SPHL + SP+ TS
Sbjct: 2509 PHAPSPHLQQLRMPSPYATS 2528
Score = 25.8 bits (54), Expect = 7.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 250 PHLTSPHLTSPHLTSPHLTS 309
PH SPHL + SP+ TS
Sbjct: 2509 PHAPSPHLQQLRMPSPYATS 2528
Score = 25.8 bits (54), Expect = 7.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 260 PHLTSPHLTSPHLTSPHLTS 319
PH SPHL + SP+ TS
Sbjct: 2509 PHAPSPHLQQLRMPSPYATS 2528
>09_04_0300 -
16488358-16488447,16488684-16489116,16489377-16489642,
16490015-16490044,16490282-16490606,16491752-16492035,
16492154-16492376,16493117-16493173,16494454-16494947
Length = 733
Score = 26.2 bits (55), Expect = 5.7
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 141 DSWSAYRQLGWEHLAAFAD 197
D W+ Y +LGW + A AD
Sbjct: 488 DIWTEYHELGWGGIKAVAD 506
>08_02_1458 -
27270834-27271320,27271752-27271961,27272627-27273624,
27274099-27274195,27274278-27274393,27274465-27274590,
27275123-27275233,27275347-27275428,27275844-27275989,
27276457-27276650,27277277-27277388,27277869-27278001,
27278295-27278437,27278488-27278562,27278830-27278937,
27279072-27279197,27279752-27279836,27280358-27280440,
27280545-27280625,27280709-27280789,27281960-27282034,
27282112-27282498,27282902-27283036
Length = 1396
Score = 26.2 bits (55), Expect = 5.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 212 QVPGIIQTLLNPHLTSPHLTSPHLT 286
Q P +I++LL HL+ HL H++
Sbjct: 857 QRPSVIESLLRRHLSIIHLAEQHIS 881
>08_01_0650 + 5617578-5618633,5619580-5619735,5619816-5620058
Length = 484
Score = 26.2 bits (55), Expect = 5.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 214 STRHHTDPFEPSPHLTS 264
STRHH EP P TS
Sbjct: 137 STRHHQGSLEPEPEFTS 153
>08_01_0051 -
355392-355450,355507-355634,356271-356425,356883-357012,
357600-357739,358384-358552,360286-360557
Length = 350
Score = 26.2 bits (55), Expect = 5.7
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1
Query: 155 RTPRVAVPLPSRASPR 108
RTP +A+P+ S ASPR
Sbjct: 91 RTPSIAIPVDSDASPR 106
>06_01_1201 + 10332105-10332168,10333054-10333571
Length = 193
Score = 26.2 bits (55), Expect = 5.7
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +1
Query: 97 HQDTRGEALEGSGTATRGVR 156
H D GEA GSG RG+R
Sbjct: 61 HADLTGEASGGSGGGARGIR 80
>04_01_0021 +
311914-312399,314218-314310,314391-314672,314754-314826,
315273-315405,315476-315629,315763-315843,316174-316296,
316629-316787,316862-316996,317159-317254,317416-317910,
318651-318722,319496-319537
Length = 807
Score = 26.2 bits (55), Expect = 5.7
Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -2
Query: 217 YLRGNAASAKAARCSH-PSCRYALHESQFRFPR 122
+ R AAS+ A CSH SCRYA E + R PR
Sbjct: 59 FFRRRAASS-ADGCSHGDSCRYAHSEEELR-PR 89
>03_05_0319 - 23064997-23065443
Length = 148
Score = 26.2 bits (55), Expect = 5.7
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 192 RRRRGAPTRAVGTHSTSRSSASLEGFSS 109
RRR GA +R + S SR + EGF S
Sbjct: 21 RRRSGACSRTLSAWSRSRRCTAREGFRS 48
>03_05_0317 - 23056409-23056855
Length = 148
Score = 26.2 bits (55), Expect = 5.7
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 192 RRRRGAPTRAVGTHSTSRSSASLEGFSS 109
RRR GA +R + S SR + EGF S
Sbjct: 21 RRRSGACSRTLSAWSRSRRCTAREGFRS 48
>03_05_0261 -
22470565-22470714,22472101-22474270,22474368-22474540,
22474763-22474924,22476420-22476560
Length = 931
Score = 26.2 bits (55), Expect = 5.7
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -3
Query: 189 RRRGAPTRAVGTHSTSRSSASLEGFSSSILVS 94
RR+G+P R+ G ++R S+S F SSIL S
Sbjct: 33 RRKGSPNRSGG---SARKSSSSREFGSSILNS 61
>12_01_0904 +
8791474-8792261,8792935-8793037,8794009-8794055,
8795180-8795717
Length = 491
Score = 25.8 bits (54), Expect = 7.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 180 GAPTRAVGTHSTSRSSASLEGFSSS 106
G+P AVG + R+SAS G S S
Sbjct: 116 GSPAAAVGQELSRRASASFSGVSPS 140
>10_08_0683 -
19860777-19861070,19861677-19861874,19862498-19862659,
19862763-19862911,19863089-19863236,19863317-19863385,
19863471-19863719,19863937-19864131,19864444-19864560,
19864978-19866537
Length = 1046
Score = 25.8 bits (54), Expect = 7.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1
Query: 211 SSTRHHTDPFEPSPHLTSPHLTSPHLTSPHLTSPH 315
SS HH +P PSP S + L + H++ H
Sbjct: 124 SSFHHHPEPPSPSPSAPSYPSIADGLANMHVSDRH 158
>10_06_0017 - 9665329-9667642,9672132-9672310
Length = 830
Score = 25.8 bits (54), Expect = 7.6
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 176 APRRLRRCSVASQVPGIIQTLLNPHLTSPHL 268
A R RRC A G++Q L++ ++P L
Sbjct: 276 ADARRRRCGAADDHAGVVQVLIDSAGSAPQL 306
>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
Length = 883
Score = 25.8 bits (54), Expect = 7.6
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 219 PASYRPF*TLTSPHLTSPHLTSPHLTSPHLTS 314
P PF T+ +P +T P T+P + +P S
Sbjct: 539 PTPSMPFPTVPAPPVTVPPATAPSMAAPAAAS 570
>09_01_0178 -
2548611-2548670,2549816-2549918,2549993-2550096,
2550893-2550988,2551418-2551482,2551558-2551591,
2552469-2552540,2552567-2552644,2553416-2553477,
2554267-2554530,2555057-2555246,2555432-2555500,
2555613-2555669,2555746-2555846,2556029-2556146,
2556225-2556272,2556362-2556487,2556960-2557118,
2558119-2558216,2558324-2558416,2559741-2559937,
2560231-2560354,2561121-2561334,2561773-2561830,
2561955-2562433
Length = 1022
Score = 25.8 bits (54), Expect = 7.6
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2
Query: 181 RCSHPSCRYALH 146
+CSHP+CR A H
Sbjct: 624 QCSHPTCRVAYH 635
>08_01_1015 - 10278480-10278992
Length = 170
Score = 25.8 bits (54), Expect = 7.6
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2
Query: 85 RIPPLLHREAVPHAVV 38
R PP+LHR+ V H +V
Sbjct: 74 RAPPVLHRDGVQHVLV 89
>06_03_1494 +
30554997-30555608,30555707-30555915,30556006-30556155,
30556254-30556312,30556852-30556961,30557216-30557322,
30557443-30557581,30557705-30557821,30557918-30558025,
30558221-30558292,30558783-30558948,30559044-30559165,
30559245-30559382,30559462-30559604,30559699-30559761,
30560107-30560170,30560238-30560373,30560478-30560551,
30560640-30560734,30560829-30560860,30560973-30561175
Length = 972
Score = 25.8 bits (54), Expect = 7.6
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 218 PGIIQTLLNPHLTSPHLTSPHLTSPHLTSP 307
P ++Q + PH +++SP SP +SP
Sbjct: 102 PELLQAMDAPHEPPANVSSPEAASPEASSP 131
>06_03_0092 +
16546204-16546693,16546958-16547028,16547145-16547221,
16547322-16547469,16550080-16550148,16550348-16550509,
16550625-16550785,16551240-16551324,16552068-16552144,
16552234-16552441,16555844-16555921,16556463-16556591,
16556665-16556808,16556893-16557038,16557137-16557293,
16557391-16557449,16557582-16557741,16557849-16557998,
16558093-16558229,16558325-16558471,16558556-16558657,
16558742-16558799,16558895-16558996,16559729-16559766,
16559868-16559994,16560075-16560245,16560334-16560465,
16560577-16560686,16560866-16560926,16561031-16561208,
16561293-16561498,16561590-16561709,16561903-16562001,
16562152-16562370,16562701-16562840,16563175-16563286,
16563375-16563425,16563509-16563589,16563683-16563853,
16563934-16564089,16564174-16564380,16565145-16565215,
16565315-16565414,16565783-16565839,16566156-16566212,
16566308-16566388,16566467-16566606,16566641-16566764
Length = 2041
Score = 25.8 bits (54), Expect = 7.6
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +1
Query: 232 DPFEPSPHLTSPHLTSPHLTSPH-LTSPHL 318
+PF+ PHL PH+ + +P SPH+
Sbjct: 644 NPFQRLPHLYDPHMMQQYKGAPFGELSPHV 673
>03_04_0029 - 16610182-16611753
Length = 523
Score = 25.8 bits (54), Expect = 7.6
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 224 IIQTLLNPHLTSPHLTSPHLTSPHLTSP 307
+ QTL P +P SP + SP +SP
Sbjct: 62 VAQTLSPPSTAAPAAASPSIASPAASSP 89
>01_05_0455 + 22387512-22387629,22388344-22388852
Length = 208
Score = 25.8 bits (54), Expect = 7.6
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 238 FEPSPHLTSPHLTSPHLTSPHLTSPH 315
F+ SP L P + +PH S H PH
Sbjct: 156 FKESPLLLLPSVGNPHWPSDHHIHPH 181
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.129 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,663,615
Number of Sequences: 37544
Number of extensions: 173929
Number of successful extensions: 957
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 411066120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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