Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_E03
(320 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93378-3|CAB07585.3| 749|Caenorhabditis elegans Hypothetical pr... 31 0.18
Z93378-4|CAE17803.1| 514|Caenorhabditis elegans Hypothetical pr... 29 0.56
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 29 0.56
AF039718-4|AAP68906.2| 696|Caenorhabditis elegans Prion-like-(q... 29 0.56
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 28 1.7
U41109-17|AAO12426.1| 726|Caenorhabditis elegans Hypothetical p... 27 2.3
U41109-15|AAZ91354.1| 819|Caenorhabditis elegans Hypothetical p... 27 2.3
U41109-14|AAO12423.1| 840|Caenorhabditis elegans Hypothetical p... 27 2.3
Z81455-2|CAD54123.1| 745|Caenorhabditis elegans Hypothetical pr... 27 3.0
Z81455-1|CAB03807.2| 792|Caenorhabditis elegans Hypothetical pr... 27 3.0
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 27 3.0
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 27 3.0
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 27 3.0
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 27 3.0
AL032637-24|CAD54171.1| 745|Caenorhabditis elegans Hypothetical... 27 3.0
AL032637-23|CAA21625.2| 792|Caenorhabditis elegans Hypothetical... 27 3.0
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 27 3.0
Z70270-10|CAA94231.1| 726|Caenorhabditis elegans Hypothetical p... 27 4.0
Z68215-17|CAA92458.1| 726|Caenorhabditis elegans Hypothetical p... 27 4.0
Z68213-5|CAA92434.1| 512|Caenorhabditis elegans Hypothetical pr... 27 4.0
AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical... 27 4.0
AF043693-1|AAB97536.1| 131|Caenorhabditis elegans Hypothetical ... 27 4.0
AF039720-7|AAB96695.1| 131|Caenorhabditis elegans Hypothetical ... 27 4.0
AC006749-2|AAF60533.3| 731|Caenorhabditis elegans Hypothetical ... 26 5.3
U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical pr... 26 7.0
U50199-6|AAA91266.1| 470|Caenorhabditis elegans Vacuolar h atpa... 26 7.0
M77697-3|AAA27898.3| 616|Caenorhabditis elegans Hypothetical pr... 26 7.0
AF038609-6|AAK29795.1| 245|Caenorhabditis elegans Hypothetical ... 26 7.0
AF036706-17|AAK39277.2| 582|Caenorhabditis elegans Enhanced rna... 25 9.2
AF016662-3|AAB66057.1| 461|Caenorhabditis elegans Hypothetical ... 25 9.2
>Z93378-3|CAB07585.3| 749|Caenorhabditis elegans Hypothetical
protein F19H8.4 protein.
Length = 749
Score = 31.1 bits (67), Expect = 0.18
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 218 PGIIQTL-LNPHLTSPHLTSPHLTSPHLTSPHLTS 319
PG+ L LNP + SP++ SP + P + SP+L S
Sbjct: 635 PGLFTPLILNPSVLSPYVFSPTVGIPFILSPYLLS 669
Score = 29.1 bits (62), Expect = 0.75
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +2
Query: 227 IQTLLNPHLTSPHLTSPHLTSPHLTSPHLTS 319
I +L+P+L SP++ SP + +P + +P++ S
Sbjct: 659 IPFILSPYLLSPYVFSPLVMAPFILNPYVLS 689
Score = 29.1 bits (62), Expect = 0.75
Identities = 10/24 (41%), Positives = 19/24 (79%)
Frame = +2
Query: 236 LLNPHLTSPHLTSPHLTSPHLTSP 307
+LNP++ SP++ +P++ SP + SP
Sbjct: 682 ILNPYVLSPNVFNPYVLSPLILSP 705
Score = 28.3 bits (60), Expect = 1.3
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +2
Query: 233 TLLNPHLTSPHLTSPHLTSPHLTSPHLTS 319
++L+P++ SP + P + SP+L SP++ S
Sbjct: 646 SVLSPYVFSPTVGIPFILSPYLLSPYVFS 674
Score = 27.1 bits (57), Expect = 3.0
Identities = 11/34 (32%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +2
Query: 215 VPGIIQT-LLNPHLTSPHLTSPHLTSPHLTSPHL 313
+P I+ LL+P++ SP + +P + +P++ SP++
Sbjct: 659 IPFILSPYLLSPYVFSPLVMAPFILNPYVLSPNV 692
Score = 26.6 bits (56), Expect = 4.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 232 DPFEPSPHLTSPHLTSPHLTSPHLTSPHL 318
+P SP++ SP + P + SP+L SP++
Sbjct: 644 NPSVLSPYVFSPTVGIPFILSPYLLSPYV 672
Score = 26.6 bits (56), Expect = 4.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 235 PFEPSPHLTSPHLTSPHLTSPHLTSP 312
P+ SP + P + SP+L SP++ SP
Sbjct: 650 PYVFSPTVGIPFILSPYLLSPYVFSP 675
Score = 26.2 bits (55), Expect = 5.3
Identities = 9/28 (32%), Positives = 20/28 (71%)
Frame = +1
Query: 235 PFEPSPHLTSPHLTSPHLTSPHLTSPHL 318
P+ SP++ SP + +P + +P++ SP++
Sbjct: 665 PYLLSPYVFSPLVMAPFILNPYVLSPNV 692
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 233 TLLNPHLTSPHLTSPHLTSPHLTSP 307
T+L+P L +P + +P + SP++ SP
Sbjct: 631 TVLSPGLFTPLILNPSVLSPYVFSP 655
Score = 25.4 bits (53), Expect = 9.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 243 TLTSPHLTSPHLTSPHLTSPHLTSP 317
T+ P + SP+L SP++ SP + +P
Sbjct: 656 TVGIPFILSPYLLSPYVFSPLVMAP 680
>Z93378-4|CAE17803.1| 514|Caenorhabditis elegans Hypothetical
protein F19H8.5 protein.
Length = 514
Score = 29.5 bits (63), Expect = 0.56
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +1
Query: 235 PFEPSPHLTSPHLTSPHLTSPHLTSPHL 318
PF SP+L SP++ SP + +P + +P++
Sbjct: 406 PFILSPYLLSPYIFSPLVMAPFILNPYV 433
Score = 29.1 bits (62), Expect = 0.75
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 218 PGIIQTL-LNPHLTSPHLTSPHLTSPHLTSPHLTS 319
P I L LNP + SP + SP + P + SP+L S
Sbjct: 381 PNIFSPLILNPSVLSPWIFSPAVPLPFILSPYLLS 415
Score = 29.1 bits (62), Expect = 0.75
Identities = 10/28 (35%), Positives = 21/28 (75%)
Frame = +2
Query: 236 LLNPHLTSPHLTSPHLTSPHLTSPHLTS 319
+L+P+L SP++ SP + +P + +P++ S
Sbjct: 408 ILSPYLLSPYIFSPLVMAPFILNPYVLS 435
Score = 29.1 bits (62), Expect = 0.75
Identities = 10/24 (41%), Positives = 19/24 (79%)
Frame = +2
Query: 236 LLNPHLTSPHLTSPHLTSPHLTSP 307
+LNP++ SP++ +P++ SP + SP
Sbjct: 428 ILNPYVLSPNIFNPYVLSPLVLSP 451
Score = 28.7 bits (61), Expect = 0.99
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 235 PFEPSPHLTSPHLTSPHLTSPHLTSPHL 318
P P P + SP+L SP++ SP + +P +
Sbjct: 401 PAVPLPFILSPYLLSPYIFSPLVMAPFI 428
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/39 (33%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +2
Query: 200 SVASQVPGIIQT-LLNPHLTSPHLTSPHLTSPHLTSPHL 313
S A +P I+ LL+P++ SP + +P + +P++ SP++
Sbjct: 400 SPAVPLPFILSPYLLSPYIFSPLVMAPFILNPYVLSPNI 438
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 219 PASYRPF*TLTSPHLTSPHLTSPHLTSPHLTSPH 320
PA PF + SP+L SP++ SP + +P + +P+
Sbjct: 401 PAVPLPF--ILSPYLLSPYIFSPLVMAPFILNPY 432
Score = 27.9 bits (59), Expect = 1.7
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +2
Query: 233 TLLNPHLTSPHLTSPHLTSPHLTSPHLTS 319
++L+P + SP + P + SP+L SP++ S
Sbjct: 392 SVLSPWIFSPAVPLPFILSPYLLSPYIFS 420
Score = 27.1 bits (57), Expect = 3.0
Identities = 9/28 (32%), Positives = 20/28 (71%)
Frame = +1
Query: 235 PFEPSPHLTSPHLTSPHLTSPHLTSPHL 318
P+ SP++ SP + +P + +P++ SP++
Sbjct: 411 PYLLSPYIFSPLVMAPFILNPYVLSPNI 438
Score = 26.2 bits (55), Expect = 5.3
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 232 DPFEPSPHLTSPHLTSPHLTSPHLTSPHL 318
+P SP + SP + P + SP+L SP++
Sbjct: 390 NPSVLSPWIFSPAVPLPFILSPYLLSPYI 418
Score = 26.2 bits (55), Expect = 5.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 235 PFEPSPHLTSPHLTSPHLTSPHLTSP 312
P+ SP + P + SP+L SP++ SP
Sbjct: 396 PWIFSPAVPLPFILSPYLLSPYIFSP 421
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 252 SPHLTSPHLTSPHLTSPHLTSP 317
SP + P + SP+L SP++ SP
Sbjct: 400 SPAVPLPFILSPYLLSPYIFSP 421
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 29.5 bits (63), Expect = 0.56
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 185 GEVLPPELSVRTPRVAVPLPSRASPRVSW 99
G PP+ SVR P+ VP P+ P W
Sbjct: 591 GSSTPPQTSVRNPKYHVPTPTDLPPPPVW 619
>AF039718-4|AAP68906.2| 696|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform b protein.
Length = 696
Score = 29.5 bits (63), Expect = 0.56
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 185 GEVLPPELSVRTPRVAVPLPSRASPRVSW 99
G PP+ SVR P+ VP P+ P W
Sbjct: 493 GSSTPPQTSVRNPKYHVPTPTDLPPPPVW 521
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 27.9 bits (59), Expect = 1.7
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 229 TDPFEPSPHLTSPHLTSPHLTSPHLTSPH 315
+DP +PSP SP+ SP+ SP+ SP+
Sbjct: 997 SDPVKPSPSGPSPNGPSPNGPSPNGPSPN 1025
>U41109-17|AAO12426.1| 726|Caenorhabditis elegans Hypothetical
protein F52E1.13d protein.
Length = 726
Score = 27.5 bits (58), Expect = 2.3
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +1
Query: 13 DLTDTKCDSLRRVALLHDEAVGE 81
D T T+ D+L RVA HD VGE
Sbjct: 23 DYTITETDTLERVAASHDCTVGE 45
>U41109-15|AAZ91354.1| 819|Caenorhabditis elegans Hypothetical
protein F52E1.13c protein.
Length = 819
Score = 27.5 bits (58), Expect = 2.3
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +1
Query: 13 DLTDTKCDSLRRVALLHDEAVGE 81
D T T+ D+L RVA HD VGE
Sbjct: 2 DYTITETDTLERVAASHDCTVGE 24
>U41109-14|AAO12423.1| 840|Caenorhabditis elegans Hypothetical
protein F52E1.13a protein.
Length = 840
Score = 27.5 bits (58), Expect = 2.3
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +1
Query: 13 DLTDTKCDSLRRVALLHDEAVGE 81
D T T+ D+L RVA HD VGE
Sbjct: 23 DYTITETDTLERVAASHDCTVGE 45
>Z81455-2|CAD54123.1| 745|Caenorhabditis elegans Hypothetical
protein B0399.1b protein.
Length = 745
Score = 27.1 bits (57), Expect = 3.0
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 171 TRAVGTHSTSRSSASLEGFSSSILVSSLTAFP 76
T + +HS SR SA E S + L SSL+ P
Sbjct: 19 TPQLNSHSHSRLSAETEATSGNTLSSSLSTIP 50
>Z81455-1|CAB03807.2| 792|Caenorhabditis elegans Hypothetical
protein B0399.1a protein.
Length = 792
Score = 27.1 bits (57), Expect = 3.0
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 171 TRAVGTHSTSRSSASLEGFSSSILVSSLTAFP 76
T + +HS SR SA E S + L SSL+ P
Sbjct: 19 TPQLNSHSHSRLSAETEATSGNTLSSSLSTIP 50
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 38 HYGVWHCFTMKQWGNAVKLLTKILEEKPSREAEL 139
H GV+ C+ + G AVK + + KP E+ L
Sbjct: 1978 HTGVYKCYATNKVGQAVKTINVHVRTKPRFESGL 2011
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 38 HYGVWHCFTMKQWGNAVKLLTKILEEKPSREAEL 139
H GV+ C+ + G AVK + + KP E+ L
Sbjct: 1978 HTGVYKCYATNKVGQAVKTINVHVRTKPRFESGL 2011
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 38 HYGVWHCFTMKQWGNAVKLLTKILEEKPSREAEL 139
H GV+ C+ + G AVK + + KP E+ L
Sbjct: 1978 HTGVYKCYATNKVGQAVKTINVHVRTKPRFESGL 2011
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 38 HYGVWHCFTMKQWGNAVKLLTKILEEKPSREAEL 139
H GV+ C+ + G AVK + + KP E+ L
Sbjct: 1978 HTGVYKCYATNKVGQAVKTINVHVRTKPRFESGL 2011
>AL032637-24|CAD54171.1| 745|Caenorhabditis elegans Hypothetical
protein B0399.1b protein.
Length = 745
Score = 27.1 bits (57), Expect = 3.0
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 171 TRAVGTHSTSRSSASLEGFSSSILVSSLTAFP 76
T + +HS SR SA E S + L SSL+ P
Sbjct: 19 TPQLNSHSHSRLSAETEATSGNTLSSSLSTIP 50
>AL032637-23|CAA21625.2| 792|Caenorhabditis elegans Hypothetical
protein B0399.1a protein.
Length = 792
Score = 27.1 bits (57), Expect = 3.0
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 171 TRAVGTHSTSRSSASLEGFSSSILVSSLTAFP 76
T + +HS SR SA E S + L SSL+ P
Sbjct: 19 TPQLNSHSHSRLSAETEATSGNTLSSSLSTIP 50
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 38 HYGVWHCFTMKQWGNAVKLLTKILEEKPSREAEL 139
H GV+ C+ + G AVK + + KP E+ L
Sbjct: 1978 HTGVYKCYATNKVGQAVKTINVHVRTKPRFESGL 2011
>Z70270-10|CAA94231.1| 726|Caenorhabditis elegans Hypothetical
protein C53B4.8a protein.
Length = 726
Score = 26.6 bits (56), Expect = 4.0
Identities = 10/35 (28%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 218 PGIIQT-LLNPHLTSPHLTSPHLTSPHLTSPHLTS 319
P ++ + N ++ SP++ SP++ +P++ SP + S
Sbjct: 647 PNVLSAAVFNAYVFSPYVLSPNVINPYVMSPLILS 681
Score = 26.2 bits (55), Expect = 5.3
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +1
Query: 247 SPHLTSPHLTSPHLTSPHLTSP 312
SP++ SP++ +P++ SP + SP
Sbjct: 661 SPYVLSPNVINPYVMSPLILSP 682
Score = 26.2 bits (55), Expect = 5.3
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +3
Query: 252 SPHLTSPHLTSPHLTSPHLTSP 317
SP++ SP++ +P++ SP + SP
Sbjct: 661 SPYVLSPNVINPYVMSPLILSP 682
>Z68215-17|CAA92458.1| 726|Caenorhabditis elegans Hypothetical
protein C53B4.8a protein.
Length = 726
Score = 26.6 bits (56), Expect = 4.0
Identities = 10/35 (28%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 218 PGIIQT-LLNPHLTSPHLTSPHLTSPHLTSPHLTS 319
P ++ + N ++ SP++ SP++ +P++ SP + S
Sbjct: 647 PNVLSAAVFNAYVFSPYVLSPNVINPYVMSPLILS 681
Score = 26.2 bits (55), Expect = 5.3
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +1
Query: 247 SPHLTSPHLTSPHLTSPHLTSP 312
SP++ SP++ +P++ SP + SP
Sbjct: 661 SPYVLSPNVINPYVMSPLILSP 682
Score = 26.2 bits (55), Expect = 5.3
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +3
Query: 252 SPHLTSPHLTSPHLTSPHLTSP 317
SP++ SP++ +P++ SP + SP
Sbjct: 661 SPYVLSPNVINPYVMSPLILSP 682
>Z68213-5|CAA92434.1| 512|Caenorhabditis elegans Hypothetical
protein C01F6.1 protein.
Length = 512
Score = 26.6 bits (56), Expect = 4.0
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 214 STRHHTDPFEPSPHLTSPHLTSPHLTS--PHLTSPHL 318
S+ H+ P +PSP+L + T P L + P+ +PH+
Sbjct: 294 SSLHYIHPHQPSPYLEALLQTVPPLLAYLPNPQNPHI 330
>AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical
protein Y59A8B.13 protein.
Length = 417
Score = 26.6 bits (56), Expect = 4.0
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 223 HHTDPFEPSPHLTSPHLTSPHLTSPHLTS 309
HH P + + + S H TS +TS H TS
Sbjct: 285 HHPPPPQSTRYYVSSHATSSSVTSLHNTS 313
>AF043693-1|AAB97536.1| 131|Caenorhabditis elegans Hypothetical
protein C34B2.4 protein.
Length = 131
Score = 26.6 bits (56), Expect = 4.0
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -1
Query: 224 CRVLERQRCICEGGEVLPPELSVRTPR 144
CR+ + +RC+ + G +L E ++T R
Sbjct: 36 CRINDGERCVPQNGVILCSECHIKTTR 62
>AF039720-7|AAB96695.1| 131|Caenorhabditis elegans Hypothetical
protein F33D11.1 protein.
Length = 131
Score = 26.6 bits (56), Expect = 4.0
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -1
Query: 224 CRVLERQRCICEGGEVLPPELSVRTPR 144
CR+ + +RC+ + G +L E ++T R
Sbjct: 36 CRINDGERCVPQNGVILCSECHIKTTR 62
>AC006749-2|AAF60533.3| 731|Caenorhabditis elegans Hypothetical
protein Y39D8B.3 protein.
Length = 731
Score = 26.2 bits (55), Expect = 5.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 235 PFEPSPHLTSPHLTSPHLTSPHLTSP 312
PF SP + P+L +P + SP + SP
Sbjct: 665 PFALSPFIGVPNLMTPIILSPFVLSP 690
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 235 PFEPSPHLTSPHLTSPHLTSPHLTSP 312
PF P+L +P + SP + SP + SP
Sbjct: 670 PFIGVPNLMTPIILSPFVLSPLILSP 695
>U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical
protein F45E4.7a protein.
Length = 868
Score = 25.8 bits (54), Expect = 7.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 214 STRHHTDPFEPSPHLTSPHLTSPHLTSP 297
S H P EPSP P PH SP
Sbjct: 29 SPHHDLPPMEPSPISPDPPPLPPHSFSP 56
>U50199-6|AAA91266.1| 470|Caenorhabditis elegans Vacuolar h atpase
protein 15 protein.
Length = 470
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 86 VKLLTKILEEKPSREAELRLVEC 154
V +L+K+ E + REA L++V+C
Sbjct: 277 VNILSKVDEREVKREAALQMVQC 299
>M77697-3|AAA27898.3| 616|Caenorhabditis elegans Hypothetical
protein B0303.4 protein.
Length = 616
Score = 25.8 bits (54), Expect = 7.0
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1
Query: 170 PELSVRTPRVAVPLPSRASPRV 105
P SVR PR P+PS + P V
Sbjct: 437 PRRSVRAPRDTTPMPSESVPVV 458
>AF038609-6|AAK29795.1| 245|Caenorhabditis elegans Hypothetical
protein C54E4.1 protein.
Length = 245
Score = 25.8 bits (54), Expect = 7.0
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 188 LRRCSVASQVPGIIQTLLNPHLTSPHLTS 274
+RR S VPG T+ NP LT TS
Sbjct: 96 VRRASNCLPVPGTPSTIPNPQLTQRRATS 124
>AF036706-17|AAK39277.2| 582|Caenorhabditis elegans Enhanced rnai
(rna interference)protein 1, isoform b protein.
Length = 582
Score = 25.4 bits (53), Expect = 9.2
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 244 PSPHLTSPHLTSPHLTS 294
PS +SPH TS H+TS
Sbjct: 535 PSSSTSSPHATSEHVTS 551
>AF016662-3|AAB66057.1| 461|Caenorhabditis elegans Hypothetical
protein C33C12.5 protein.
Length = 461
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +1
Query: 235 PFEPSPHLTSPHLTS-PHLTSPHL 303
PF PS HLT P ++ PH SP++
Sbjct: 124 PFAPSAHLTGPFISHYPHY-SPNM 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.129 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,740,844
Number of Sequences: 27780
Number of extensions: 125193
Number of successful extensions: 754
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 693
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 376873630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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