Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_E02
(425 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M36661-1|AAA61256.1| 468|Homo sapiens UMPS protein. 105 5e-23
J03626-1|AAA61255.1| 480|Homo sapiens UMPS protein. 105 5e-23
D86227-1|BAA19920.1| 480|Homo sapiens UMP synthase protein. 105 5e-23
CR456787-1|CAG33068.1| 480|Homo sapiens UMPS protein. 105 5e-23
BC007511-1|AAH07511.1| 480|Homo sapiens uridine monophosphate s... 105 5e-23
BC000364-1|AAH00364.1| 480|Homo sapiens uridine monophosphate s... 105 5e-23
AY691629-1|AAT85801.1| 480|Homo sapiens uridine monophosphate s... 105 5e-23
AB062285-1|BAB93468.1| 480|Homo sapiens uridine monophosphate s... 105 5e-23
AB041359-1|BAB20663.1| 480|Homo sapiens UMP synthase protein. 105 5e-23
D86230-1|BAA19923.1| 480|Homo sapiens UMP synthase protein. 103 3e-22
D86228-1|BAA19921.1| 480|Homo sapiens UMP synthase protein. 103 3e-22
CR533551-1|CAG38582.1| 502|Homo sapiens UBAP1 protein. 31 1.2
BC100668-1|AAI00669.1| 502|Homo sapiens ubiquitin associated pr... 31 1.2
BC099726-1|AAH99726.1| 502|Homo sapiens ubiquitin associated pr... 31 1.2
BC098316-1|AAH98316.1| 502|Homo sapiens ubiquitin associated pr... 31 1.2
BC098141-1|AAH98141.1| 502|Homo sapiens ubiquitin associated pr... 31 1.2
BC020950-1|AAH20950.1| 502|Homo sapiens ubiquitin associated pr... 31 1.2
AL353662-3|CAI15915.1| 441|Homo sapiens ubiquitin associated pr... 31 1.2
AL353662-2|CAI15914.1| 502|Homo sapiens ubiquitin associated pr... 31 1.2
AK223235-1|BAD96955.1| 502|Homo sapiens ubiquitin associated pr... 31 1.2
AK074995-1|BAC11342.1| 502|Homo sapiens protein ( Homo sapiens ... 31 1.2
AK074969-1|BAC11323.1| 502|Homo sapiens protein ( Homo sapiens ... 31 1.2
AK074812-1|BAC11224.1| 502|Homo sapiens protein ( Homo sapiens ... 31 1.2
AK074745-1|BAC11176.1| 502|Homo sapiens protein ( Homo sapiens ... 31 1.2
AF222043-1|AAF37827.2| 502|Homo sapiens ubiquitin-associated pr... 31 1.2
X99975-1|CAA68236.1| 480|Homo sapiens hRTR/hGCNF protein protein. 30 2.8
U80802-1|AAB96828.1| 480|Homo sapiens orphan nuclear receptor G... 30 2.8
U64876-1|AAB06335.1| 480|Homo sapiens nuclear orphan receptor p... 30 2.8
S83309-1|AAB50876.1| 476|Homo sapiens germ cell nuclear factor ... 30 2.8
BC030600-1|AAH30600.1| 475|Homo sapiens nuclear receptor subfam... 30 2.8
AL354979-4|CAI10960.1| 479|Homo sapiens nuclear receptor subfam... 30 2.8
AL354928-2|CAI39633.1| 479|Homo sapiens nuclear receptor subfam... 30 2.8
AL158075-1|CAI13577.1| 479|Homo sapiens nuclear receptor subfam... 30 2.8
AF004291-1|AAC52054.1| 454|Homo sapiens germ cell nuclear facto... 30 2.8
>M36661-1|AAA61256.1| 468|Homo sapiens UMPS protein.
Length = 468
Score = 105 bits (253), Expect = 5e-23
Identities = 48/102 (47%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Frame = +3
Query: 123 LFSIDAIKFGEFITKSGIKTPVYFDLRVIVSYPETMELIANLLYDFALENKI-YNHICGV 299
L+ + A KFG+F+ KSG+ +P+Y DLR IVS P + +A++L+ A I ++ +CGV
Sbjct: 3 LYDVQAFKFGDFVLKSGLSSPIYIDLRGIVSRPRLLSQVADILFQTAQNAGISFDTVCGV 62
Query: 300 PYTALPIATLLSIKSKKSMLMRRKETKAYGTKKSIEGHYQSG 425
PYTALP+AT++ ++ ML+RRKETK YGTK+ +EG G
Sbjct: 63 PYTALPLATVICSTNQIPMLIRRKETKDYGTKRLVEGTINPG 104
>J03626-1|AAA61255.1| 480|Homo sapiens UMPS protein.
Length = 480
Score = 105 bits (253), Expect = 5e-23
Identities = 48/102 (47%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Frame = +3
Query: 123 LFSIDAIKFGEFITKSGIKTPVYFDLRVIVSYPETMELIANLLYDFALENKI-YNHICGV 299
L+ + A KFG+F+ KSG+ +P+Y DLR IVS P + +A++L+ A I ++ +CGV
Sbjct: 15 LYDVQAFKFGDFVLKSGLSSPIYIDLRGIVSRPRLLSQVADILFQTAQNAGISFDTVCGV 74
Query: 300 PYTALPIATLLSIKSKKSMLMRRKETKAYGTKKSIEGHYQSG 425
PYTALP+AT++ ++ ML+RRKETK YGTK+ +EG G
Sbjct: 75 PYTALPLATVICSTNQIPMLIRRKETKDYGTKRLVEGTINPG 116
>D86227-1|BAA19920.1| 480|Homo sapiens UMP synthase protein.
Length = 480
Score = 105 bits (253), Expect = 5e-23
Identities = 48/102 (47%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Frame = +3
Query: 123 LFSIDAIKFGEFITKSGIKTPVYFDLRVIVSYPETMELIANLLYDFALENKI-YNHICGV 299
L+ + A KFG+F+ KSG+ +P+Y DLR IVS P + +A++L+ A I ++ +CGV
Sbjct: 15 LYDVQAFKFGDFVLKSGLSSPIYIDLRGIVSRPRLLSQVADILFQTAQNAGISFDTVCGV 74
Query: 300 PYTALPIATLLSIKSKKSMLMRRKETKAYGTKKSIEGHYQSG 425
PYTALP+AT++ ++ ML+RRKETK YGTK+ +EG G
Sbjct: 75 PYTALPLATVICSTNQIPMLIRRKETKDYGTKRLVEGTINPG 116
>CR456787-1|CAG33068.1| 480|Homo sapiens UMPS protein.
Length = 480
Score = 105 bits (253), Expect = 5e-23
Identities = 48/102 (47%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Frame = +3
Query: 123 LFSIDAIKFGEFITKSGIKTPVYFDLRVIVSYPETMELIANLLYDFALENKI-YNHICGV 299
L+ + A KFG+F+ KSG+ +P+Y DLR IVS P + +A++L+ A I ++ +CGV
Sbjct: 15 LYDVQAFKFGDFVLKSGLSSPIYIDLRGIVSRPRLLSQVADILFQTAQNAGISFDTVCGV 74
Query: 300 PYTALPIATLLSIKSKKSMLMRRKETKAYGTKKSIEGHYQSG 425
PYTALP+AT++ ++ ML+RRKETK YGTK+ +EG G
Sbjct: 75 PYTALPLATVICSTNQIPMLIRRKETKDYGTKRLVEGTINPG 116
>BC007511-1|AAH07511.1| 480|Homo sapiens uridine monophosphate
synthetase (orotate phosphoribosyl transferase and
orotid protein.
Length = 480
Score = 105 bits (253), Expect = 5e-23
Identities = 48/102 (47%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Frame = +3
Query: 123 LFSIDAIKFGEFITKSGIKTPVYFDLRVIVSYPETMELIANLLYDFALENKI-YNHICGV 299
L+ + A KFG+F+ KSG+ +P+Y DLR IVS P + +A++L+ A I ++ +CGV
Sbjct: 15 LYDVQAFKFGDFVLKSGLSSPIYIDLRGIVSRPRLLSQVADILFQTAQNAGISFDTVCGV 74
Query: 300 PYTALPIATLLSIKSKKSMLMRRKETKAYGTKKSIEGHYQSG 425
PYTALP+AT++ ++ ML+RRKETK YGTK+ +EG G
Sbjct: 75 PYTALPLATVICSTNQIPMLIRRKETKDYGTKRLVEGTINPG 116
>BC000364-1|AAH00364.1| 480|Homo sapiens uridine monophosphate
synthetase (orotate phosphoribosyl transferase and
orotid protein.
Length = 480
Score = 105 bits (253), Expect = 5e-23
Identities = 48/102 (47%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Frame = +3
Query: 123 LFSIDAIKFGEFITKSGIKTPVYFDLRVIVSYPETMELIANLLYDFALENKI-YNHICGV 299
L+ + A KFG+F+ KSG+ +P+Y DLR IVS P + +A++L+ A I ++ +CGV
Sbjct: 15 LYDVQAFKFGDFVLKSGLSSPIYIDLRGIVSRPRLLSQVADILFQTAQNAGISFDTVCGV 74
Query: 300 PYTALPIATLLSIKSKKSMLMRRKETKAYGTKKSIEGHYQSG 425
PYTALP+AT++ ++ ML+RRKETK YGTK+ +EG G
Sbjct: 75 PYTALPLATVICSTNQIPMLIRRKETKDYGTKRLVEGTINPG 116
>AY691629-1|AAT85801.1| 480|Homo sapiens uridine monophosphate
synthetase (orotate phosphoribosyl transferase and
orotid protein.
Length = 480
Score = 105 bits (253), Expect = 5e-23
Identities = 48/102 (47%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Frame = +3
Query: 123 LFSIDAIKFGEFITKSGIKTPVYFDLRVIVSYPETMELIANLLYDFALENKI-YNHICGV 299
L+ + A KFG+F+ KSG+ +P+Y DLR IVS P + +A++L+ A I ++ +CGV
Sbjct: 15 LYDVQAFKFGDFVLKSGLSSPIYIDLRGIVSRPRLLSQVADILFQTAQNAGISFDTVCGV 74
Query: 300 PYTALPIATLLSIKSKKSMLMRRKETKAYGTKKSIEGHYQSG 425
PYTALP+AT++ ++ ML+RRKETK YGTK+ +EG G
Sbjct: 75 PYTALPLATVICSTNQIPMLIRRKETKDYGTKRLVEGTINPG 116
>AB062285-1|BAB93468.1| 480|Homo sapiens uridine monophosphate
synthetase protein.
Length = 480
Score = 105 bits (253), Expect = 5e-23
Identities = 48/102 (47%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Frame = +3
Query: 123 LFSIDAIKFGEFITKSGIKTPVYFDLRVIVSYPETMELIANLLYDFALENKI-YNHICGV 299
L+ + A KFG+F+ KSG+ +P+Y DLR IVS P + +A++L+ A I ++ +CGV
Sbjct: 15 LYDVQAFKFGDFVLKSGLSSPIYIDLRGIVSRPRLLSQVADILFQTAQNAGISFDTVCGV 74
Query: 300 PYTALPIATLLSIKSKKSMLMRRKETKAYGTKKSIEGHYQSG 425
PYTALP+AT++ ++ ML+RRKETK YGTK+ +EG G
Sbjct: 75 PYTALPLATVICSTNQIPMLIRRKETKDYGTKRLVEGTINPG 116
>AB041359-1|BAB20663.1| 480|Homo sapiens UMP synthase protein.
Length = 480
Score = 105 bits (253), Expect = 5e-23
Identities = 48/102 (47%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Frame = +3
Query: 123 LFSIDAIKFGEFITKSGIKTPVYFDLRVIVSYPETMELIANLLYDFALENKI-YNHICGV 299
L+ + A KFG+F+ KSG+ +P+Y DLR IVS P + +A++L+ A I ++ +CGV
Sbjct: 15 LYDVQAFKFGDFVLKSGLSSPIYIDLRGIVSRPRLLSQVADILFQTAQNAGISFDTVCGV 74
Query: 300 PYTALPIATLLSIKSKKSMLMRRKETKAYGTKKSIEGHYQSG 425
PYTALP+AT++ ++ ML+RRKETK YGTK+ +EG G
Sbjct: 75 PYTALPLATVICSTNQIPMLIRRKETKDYGTKRLVEGTINPG 116
>D86230-1|BAA19923.1| 480|Homo sapiens UMP synthase protein.
Length = 480
Score = 103 bits (246), Expect = 3e-22
Identities = 48/102 (47%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Frame = +3
Query: 123 LFSIDAIKFGEFITKSGIKTPVYFDLRVIVSYPETMELIANLLYDFALENKI-YNHICGV 299
L+ + A KFG+F+ KSG+ +P+Y DLR IVS P + +A++L+ A I ++ +CGV
Sbjct: 15 LYDVQAFKFGDFVLKSGLSSPIYIDLRGIVSRPRLLSQVADILFQTAQNAGISFDTVCGV 74
Query: 300 PYTALPIATLLSIKSKKSMLMRRKETKAYGTKKSIEGHYQSG 425
PYTALP+AT++ ++ ML+RRKETK YGTK+ EG G
Sbjct: 75 PYTALPLATVICSTNQIPMLIRRKETKDYGTKRLGEGTINPG 116
>D86228-1|BAA19921.1| 480|Homo sapiens UMP synthase protein.
Length = 480
Score = 103 bits (246), Expect = 3e-22
Identities = 47/102 (46%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Frame = +3
Query: 123 LFSIDAIKFGEFITKSGIKTPVYFDLRVIVSYPETMELIANLLYDFALENKI-YNHICGV 299
L+ + A KFG+F+ KSG+ +P+Y DLR IVS P + +A++L+ A I ++ +CGV
Sbjct: 15 LYDVQAFKFGDFVLKSGLSSPIYIDLRGIVSRPRLLSQVADILFQTAQNAGISFDTVCGV 74
Query: 300 PYTALPIATLLSIKSKKSMLMRRKETKAYGTKKSIEGHYQSG 425
PYTALP+AT++ ++ ML+ RKETK YGTK+ +EG G
Sbjct: 75 PYTALPLATVICSTNQIPMLIGRKETKDYGTKRLVEGTINPG 116
>CR533551-1|CAG38582.1| 502|Homo sapiens UBAP1 protein.
Length = 502
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 156 FITKSGIKTPVYFDLRVIVSYPETMELIANLLYDFALENK 275
F T KTP L + S P+ ++++ + YDF+LE K
Sbjct: 22 FKTGDKFKTPAKVGLPIGFSLPDCLQVVREVQYDFSLEKK 61
>BC100668-1|AAI00669.1| 502|Homo sapiens ubiquitin associated
protein 1 protein.
Length = 502
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 156 FITKSGIKTPVYFDLRVIVSYPETMELIANLLYDFALENK 275
F T KTP L + S P+ ++++ + YDF+LE K
Sbjct: 22 FKTGDKFKTPAKVGLPIGFSLPDCLQVVREVQYDFSLEKK 61
>BC099726-1|AAH99726.1| 502|Homo sapiens ubiquitin associated
protein 1 protein.
Length = 502
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 156 FITKSGIKTPVYFDLRVIVSYPETMELIANLLYDFALENK 275
F T KTP L + S P+ ++++ + YDF+LE K
Sbjct: 22 FKTGDKFKTPAKVGLPIGFSLPDCLQVVREVQYDFSLEKK 61
>BC098316-1|AAH98316.1| 502|Homo sapiens ubiquitin associated
protein 1 protein.
Length = 502
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 156 FITKSGIKTPVYFDLRVIVSYPETMELIANLLYDFALENK 275
F T KTP L + S P+ ++++ + YDF+LE K
Sbjct: 22 FKTGDKFKTPAKVGLPIGFSLPDCLQVVREVQYDFSLEKK 61
>BC098141-1|AAH98141.1| 502|Homo sapiens ubiquitin associated
protein 1 protein.
Length = 502
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 156 FITKSGIKTPVYFDLRVIVSYPETMELIANLLYDFALENK 275
F T KTP L + S P+ ++++ + YDF+LE K
Sbjct: 22 FKTGDKFKTPAKVGLPIGFSLPDCLQVVREVQYDFSLEKK 61
>BC020950-1|AAH20950.1| 502|Homo sapiens ubiquitin associated
protein 1 protein.
Length = 502
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 156 FITKSGIKTPVYFDLRVIVSYPETMELIANLLYDFALENK 275
F T KTP L + S P+ ++++ + YDF+LE K
Sbjct: 22 FKTGDKFKTPAKVGLPIGFSLPDCLQVVREVQYDFSLEKK 61
>AL353662-3|CAI15915.1| 441|Homo sapiens ubiquitin associated
protein 1 protein.
Length = 441
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 156 FITKSGIKTPVYFDLRVIVSYPETMELIANLLYDFALENK 275
F T KTP L + S P+ ++++ + YDF+LE K
Sbjct: 22 FKTGDKFKTPAKVGLPIGFSLPDCLQVVREVQYDFSLEKK 61
>AL353662-2|CAI15914.1| 502|Homo sapiens ubiquitin associated
protein 1 protein.
Length = 502
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 156 FITKSGIKTPVYFDLRVIVSYPETMELIANLLYDFALENK 275
F T KTP L + S P+ ++++ + YDF+LE K
Sbjct: 22 FKTGDKFKTPAKVGLPIGFSLPDCLQVVREVQYDFSLEKK 61
>AK223235-1|BAD96955.1| 502|Homo sapiens ubiquitin associated
protein variant protein.
Length = 502
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 156 FITKSGIKTPVYFDLRVIVSYPETMELIANLLYDFALENK 275
F T KTP L + S P+ ++++ + YDF+LE K
Sbjct: 22 FKTGDKFKTPAKVGLPIGFSLPDCLQVVREVQYDFSLEKK 61
>AK074995-1|BAC11342.1| 502|Homo sapiens protein ( Homo sapiens
cDNA FLJ90514 fis, clone NT2RP3004374. ).
Length = 502
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 156 FITKSGIKTPVYFDLRVIVSYPETMELIANLLYDFALENK 275
F T KTP L + S P+ ++++ + YDF+LE K
Sbjct: 22 FKTGDKFKTPAKVGLPIGFSLPDCLQVVREVQYDFSLEKK 61
>AK074969-1|BAC11323.1| 502|Homo sapiens protein ( Homo sapiens
cDNA FLJ90488 fis, clone NT2RP3003469. ).
Length = 502
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 156 FITKSGIKTPVYFDLRVIVSYPETMELIANLLYDFALENK 275
F T KTP L + S P+ ++++ + YDF+LE K
Sbjct: 22 FKTGDKFKTPAKVGLPIGFSLPDCLQVVREVQYDFSLEKK 61
>AK074812-1|BAC11224.1| 502|Homo sapiens protein ( Homo sapiens
cDNA FLJ90331 fis, clone NT2RP2002015. ).
Length = 502
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 156 FITKSGIKTPVYFDLRVIVSYPETMELIANLLYDFALENK 275
F T KTP L + S P+ ++++ + YDF+LE K
Sbjct: 22 FKTGDKFKTPAKVGLPIGFSLPDCLQVVREVQYDFSLEKK 61
>AK074745-1|BAC11176.1| 502|Homo sapiens protein ( Homo sapiens
cDNA FLJ90264 fis, clone NT2RM4001321. ).
Length = 502
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 156 FITKSGIKTPVYFDLRVIVSYPETMELIANLLYDFALENK 275
F T KTP L + S P+ ++++ + YDF+LE K
Sbjct: 22 FKTGDKFKTPAKVGLPIGFSLPDCLQVVREVQYDFSLEKK 61
>AF222043-1|AAF37827.2| 502|Homo sapiens ubiquitin-associated
protein protein.
Length = 502
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 156 FITKSGIKTPVYFDLRVIVSYPETMELIANLLYDFALENK 275
F T KTP L + S P+ ++++ + YDF+LE K
Sbjct: 22 FKTGDKFKTPAKVGLPIGFSLPDCLQVVREVQYDFSLEKK 61
>X99975-1|CAA68236.1| 480|Homo sapiens hRTR/hGCNF protein protein.
Length = 480
Score = 30.3 bits (65), Expect = 2.8
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -2
Query: 148 NFIASIENNLIATNSSRSLSLSHYYICYLFSNFKYTH 38
NF+ L + + L+ ++YIC F+ +KYTH
Sbjct: 396 NFLNQDIRGLTSASQLEQLNKRYWYICQDFTEYKYTH 432
>U80802-1|AAB96828.1| 480|Homo sapiens orphan nuclear receptor GCNF
protein.
Length = 480
Score = 30.3 bits (65), Expect = 2.8
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -2
Query: 148 NFIASIENNLIATNSSRSLSLSHYYICYLFSNFKYTH 38
NF+ L + + L+ ++YIC F+ +KYTH
Sbjct: 396 NFLNQDIRGLTSASQLEQLNKRYWYICQDFTEYKYTH 432
>U64876-1|AAB06335.1| 480|Homo sapiens nuclear orphan receptor
protein.
Length = 480
Score = 30.3 bits (65), Expect = 2.8
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -2
Query: 148 NFIASIENNLIATNSSRSLSLSHYYICYLFSNFKYTH 38
NF+ L + + L+ ++YIC F+ +KYTH
Sbjct: 396 NFLNQDIRGLTSASQLEQLNKRYWYICQDFTEYKYTH 432
>S83309-1|AAB50876.1| 476|Homo sapiens germ cell nuclear factor
protein.
Length = 476
Score = 30.3 bits (65), Expect = 2.8
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -2
Query: 148 NFIASIENNLIATNSSRSLSLSHYYICYLFSNFKYTH 38
NF+ L + + L+ ++YIC F+ +KYTH
Sbjct: 392 NFLNQDIRGLTSASQLEQLNKRYWYICQDFTEYKYTH 428
>BC030600-1|AAH30600.1| 475|Homo sapiens nuclear receptor subfamily
6, group A, member 1 protein.
Length = 475
Score = 30.3 bits (65), Expect = 2.8
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -2
Query: 148 NFIASIENNLIATNSSRSLSLSHYYICYLFSNFKYTH 38
NF+ L + + L+ ++YIC F+ +KYTH
Sbjct: 391 NFLNQDIRGLTSASQLEQLNKRYWYICQDFTEYKYTH 427
>AL354979-4|CAI10960.1| 479|Homo sapiens nuclear receptor subfamily
6, group A, member 1 protein.
Length = 479
Score = 30.3 bits (65), Expect = 2.8
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -2
Query: 148 NFIASIENNLIATNSSRSLSLSHYYICYLFSNFKYTH 38
NF+ L + + L+ ++YIC F+ +KYTH
Sbjct: 395 NFLNQDIRGLTSASQLEQLNKRYWYICQDFTEYKYTH 431
>AL354928-2|CAI39633.1| 479|Homo sapiens nuclear receptor subfamily
6, group A, member 1 protein.
Length = 479
Score = 30.3 bits (65), Expect = 2.8
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -2
Query: 148 NFIASIENNLIATNSSRSLSLSHYYICYLFSNFKYTH 38
NF+ L + + L+ ++YIC F+ +KYTH
Sbjct: 395 NFLNQDIRGLTSASQLEQLNKRYWYICQDFTEYKYTH 431
>AL158075-1|CAI13577.1| 479|Homo sapiens nuclear receptor subfamily
6, group A, member 1 protein.
Length = 479
Score = 30.3 bits (65), Expect = 2.8
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -2
Query: 148 NFIASIENNLIATNSSRSLSLSHYYICYLFSNFKYTH 38
NF+ L + + L+ ++YIC F+ +KYTH
Sbjct: 395 NFLNQDIRGLTSASQLEQLNKRYWYICQDFTEYKYTH 431
>AF004291-1|AAC52054.1| 454|Homo sapiens germ cell nuclear factor
protein.
Length = 454
Score = 30.3 bits (65), Expect = 2.8
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -2
Query: 148 NFIASIENNLIATNSSRSLSLSHYYICYLFSNFKYTH 38
NF+ L + + L+ ++YIC F+ +KYTH
Sbjct: 370 NFLNQDIRGLTSASQLEQLNKRYWYICQDFTEYKYTH 406
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,015,027
Number of Sequences: 237096
Number of extensions: 1038621
Number of successful extensions: 1424
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1413
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3316445452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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