Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_D24
(378 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88314-4|AAK71360.1| 494|Caenorhabditis elegans Let-23 fertilit... 54 4e-08
U88314-3|AAK71361.1| 394|Caenorhabditis elegans Let-23 fertilit... 54 4e-08
U88314-2|AAF99884.2| 461|Caenorhabditis elegans Let-23 fertilit... 54 4e-08
AF045613-1|AAC38962.1| 461|Caenorhabditis elegans inositol tris... 54 4e-08
AF045612-1|AAC38961.1| 394|Caenorhabditis elegans inositol tris... 54 4e-08
AF045611-1|AAC38960.1| 494|Caenorhabditis elegans inositol tris... 54 4e-08
Z99269-1|CAB16467.1| 1461|Caenorhabditis elegans Hypothetical pr... 30 0.63
AL117204-4|CAB55144.1| 281|Caenorhabditis elegans Hypothetical ... 29 1.5
AF100673-3|ABA00151.1| 950|Caenorhabditis elegans Hypothetical ... 29 1.5
AF100673-2|AAU05553.1| 899|Caenorhabditis elegans Hypothetical ... 29 1.5
AF100673-1|AAP13733.1| 897|Caenorhabditis elegans Hypothetical ... 29 1.5
Z49130-7|CAA88972.2| 316|Caenorhabditis elegans Hypothetical pr... 26 7.8
AF130443-1|AAD28468.1| 956|Caenorhabditis elegans EAG K+ channe... 26 7.8
AF036695-1|AAB88348.2| 956|Caenorhabditis elegans Egg laying de... 26 7.8
>U88314-4|AAK71360.1| 494|Caenorhabditis elegans Let-23 fertility
effector/regulatorprotein 2, isoform a protein.
Length = 494
Score = 53.6 bits (123), Expect = 4e-08
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = +3
Query: 219 LMDVTMGTRTFLEDEVSNAHARSDLYEKMVRLDPNCTTDAE 341
+MD+ +GTRTFLE EVSN R+DLYEKMV +D + T+ E
Sbjct: 274 IMDIKIGTRTFLESEVSNTKKRADLYEKMVAIDNDEPTEEE 314
Score = 53.2 bits (122), Expect = 6e-08
Identities = 28/70 (40%), Positives = 41/70 (58%)
Frame = +2
Query: 5 GSLAPAGPGTVWKRRAPGDHPAHNPERDAYEALAACPHMRAVIPRYYRELEYGGERFIEL 184
GS+ PA P T++K++ A+ E AY+ ++ P + P+YY ELE E FIE+
Sbjct: 205 GSIVPATPHTLYKKQC-----ANCGEGRAYKNISKDPALDGFTPKYYDELEKNEEHFIEI 259
Query: 185 QDLLHGFRDP 214
+DLL F DP
Sbjct: 260 EDLLQQFHDP 269
>U88314-3|AAK71361.1| 394|Caenorhabditis elegans Let-23 fertility
effector/regulatorprotein 2, isoform b protein.
Length = 394
Score = 53.6 bits (123), Expect = 4e-08
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = +3
Query: 219 LMDVTMGTRTFLEDEVSNAHARSDLYEKMVRLDPNCTTDAE 341
+MD+ +GTRTFLE EVSN R+DLYEKMV +D + T+ E
Sbjct: 174 IMDIKIGTRTFLESEVSNTKKRADLYEKMVAIDNDEPTEEE 214
Score = 53.2 bits (122), Expect = 6e-08
Identities = 28/70 (40%), Positives = 41/70 (58%)
Frame = +2
Query: 5 GSLAPAGPGTVWKRRAPGDHPAHNPERDAYEALAACPHMRAVIPRYYRELEYGGERFIEL 184
GS+ PA P T++K++ A+ E AY+ ++ P + P+YY ELE E FIE+
Sbjct: 105 GSIVPATPHTLYKKQC-----ANCGEGRAYKNISKDPALDGFTPKYYDELEKNEEHFIEI 159
Query: 185 QDLLHGFRDP 214
+DLL F DP
Sbjct: 160 EDLLQQFHDP 169
>U88314-2|AAF99884.2| 461|Caenorhabditis elegans Let-23 fertility
effector/regulatorprotein 2, isoform c protein.
Length = 461
Score = 53.6 bits (123), Expect = 4e-08
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = +3
Query: 219 LMDVTMGTRTFLEDEVSNAHARSDLYEKMVRLDPNCTTDAE 341
+MD+ +GTRTFLE EVSN R+DLYEKMV +D + T+ E
Sbjct: 241 IMDIKIGTRTFLESEVSNTKKRADLYEKMVAIDNDEPTEEE 281
Score = 53.2 bits (122), Expect = 6e-08
Identities = 28/70 (40%), Positives = 41/70 (58%)
Frame = +2
Query: 5 GSLAPAGPGTVWKRRAPGDHPAHNPERDAYEALAACPHMRAVIPRYYRELEYGGERFIEL 184
GS+ PA P T++K++ A+ E AY+ ++ P + P+YY ELE E FIE+
Sbjct: 172 GSIVPATPHTLYKKQC-----ANCGEGRAYKNISKDPALDGFTPKYYDELEKNEEHFIEI 226
Query: 185 QDLLHGFRDP 214
+DLL F DP
Sbjct: 227 EDLLQQFHDP 236
>AF045613-1|AAC38962.1| 461|Caenorhabditis elegans inositol
trisphosphate 3-kinaseform 3 protein.
Length = 461
Score = 53.6 bits (123), Expect = 4e-08
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = +3
Query: 219 LMDVTMGTRTFLEDEVSNAHARSDLYEKMVRLDPNCTTDAE 341
+MD+ +GTRTFLE EVSN R+DLYEKMV +D + T+ E
Sbjct: 241 IMDIKIGTRTFLESEVSNTKKRADLYEKMVAIDNDEPTEEE 281
Score = 53.2 bits (122), Expect = 6e-08
Identities = 28/70 (40%), Positives = 41/70 (58%)
Frame = +2
Query: 5 GSLAPAGPGTVWKRRAPGDHPAHNPERDAYEALAACPHMRAVIPRYYRELEYGGERFIEL 184
GS+ PA P T++K++ A+ E AY+ ++ P + P+YY ELE E FIE+
Sbjct: 172 GSIVPATPHTLYKKQC-----ANCGEGRAYKNISKDPALDGFTPKYYDELEKNEEHFIEI 226
Query: 185 QDLLHGFRDP 214
+DLL F DP
Sbjct: 227 EDLLQQFHDP 236
>AF045612-1|AAC38961.1| 394|Caenorhabditis elegans inositol
trisphosphate 3-kinaseform 2 protein.
Length = 394
Score = 53.6 bits (123), Expect = 4e-08
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = +3
Query: 219 LMDVTMGTRTFLEDEVSNAHARSDLYEKMVRLDPNCTTDAE 341
+MD+ +GTRTFLE EVSN R+DLYEKMV +D + T+ E
Sbjct: 174 IMDIKIGTRTFLESEVSNTKKRADLYEKMVAIDNDEPTEEE 214
Score = 53.2 bits (122), Expect = 6e-08
Identities = 28/70 (40%), Positives = 41/70 (58%)
Frame = +2
Query: 5 GSLAPAGPGTVWKRRAPGDHPAHNPERDAYEALAACPHMRAVIPRYYRELEYGGERFIEL 184
GS+ PA P T++K++ A+ E AY+ ++ P + P+YY ELE E FIE+
Sbjct: 105 GSIVPATPHTLYKKQC-----ANCGEGRAYKNISKDPALDGFTPKYYDELEKNEEHFIEI 159
Query: 185 QDLLHGFRDP 214
+DLL F DP
Sbjct: 160 EDLLQQFHDP 169
>AF045611-1|AAC38960.1| 494|Caenorhabditis elegans inositol
trisphosphate 3-kinaseform 1 protein.
Length = 494
Score = 53.6 bits (123), Expect = 4e-08
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = +3
Query: 219 LMDVTMGTRTFLEDEVSNAHARSDLYEKMVRLDPNCTTDAE 341
+MD+ +GTRTFLE EVSN R+DLYEKMV +D + T+ E
Sbjct: 274 IMDIKIGTRTFLESEVSNTKKRADLYEKMVAIDNDEPTEEE 314
Score = 53.2 bits (122), Expect = 6e-08
Identities = 28/70 (40%), Positives = 41/70 (58%)
Frame = +2
Query: 5 GSLAPAGPGTVWKRRAPGDHPAHNPERDAYEALAACPHMRAVIPRYYRELEYGGERFIEL 184
GS+ PA P T++K++ A+ E AY+ ++ P + P+YY ELE E FIE+
Sbjct: 205 GSIVPATPHTLYKKQC-----ANCGEGRAYKNISKDPALDGFTPKYYDELEKNEEHFIEI 259
Query: 185 QDLLHGFRDP 214
+DLL F DP
Sbjct: 260 EDLLQQFHDP 269
>Z99269-1|CAB16467.1| 1461|Caenorhabditis elegans Hypothetical
protein W10C6.1 protein.
Length = 1461
Score = 29.9 bits (64), Expect = 0.63
Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 5/69 (7%)
Frame = +2
Query: 14 APAGPGTVWKRRAPGDHPAHNPERDAYEALAACPHMRAVIPRYYR-----ELEYGGERFI 178
+P G G R D + R +E + P + Y+ EL+ GE F+
Sbjct: 303 SPEGHGGKQMRPRMSDSEVLSMMRQFFEEMTFRPKSEVITEDGYKCHLSVELDPNGEGFV 362
Query: 179 ELQDLLHGF 205
QDLLH F
Sbjct: 363 HTQDLLHAF 371
>AL117204-4|CAB55144.1| 281|Caenorhabditis elegans Hypothetical
protein Y116A8C.11 protein.
Length = 281
Score = 28.7 bits (61), Expect = 1.5
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = +3
Query: 144 IVNWNMEEKDLSNFKIYFMASVTHMLMDVTMGTRTFLEDEVSNAHARSDLYEKMVRLDPN 323
I++ N EKD SN K YF+ ++L+ + LE E D+ E +R+
Sbjct: 112 ILSKNKVEKDYSNDKRYFLEREQYLLITMESMESGKLEHEQQTEIMNKDVEELKIRVKEL 171
Query: 324 CTTD 335
TD
Sbjct: 172 EATD 175
>AF100673-3|ABA00151.1| 950|Caenorhabditis elegans Hypothetical
protein Y66H1B.2c protein.
Length = 950
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -2
Query: 86 HVPDYELDDPPERDVSIRFQDQRVPES 6
HV DY++ P E V+++F DQ +P+S
Sbjct: 601 HV-DYKVATPGEYVVAVKFNDQHIPDS 626
>AF100673-2|AAU05553.1| 899|Caenorhabditis elegans Hypothetical
protein Y66H1B.2b protein.
Length = 899
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -2
Query: 86 HVPDYELDDPPERDVSIRFQDQRVPES 6
HV DY++ P E V+++F DQ +P+S
Sbjct: 550 HV-DYKVATPGEYVVAVKFNDQHIPDS 575
>AF100673-1|AAP13733.1| 897|Caenorhabditis elegans Hypothetical
protein Y66H1B.2a protein.
Length = 897
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -2
Query: 86 HVPDYELDDPPERDVSIRFQDQRVPES 6
HV DY++ P E V+++F DQ +P+S
Sbjct: 548 HV-DYKVATPGEYVVAVKFNDQHIPDS 573
>Z49130-7|CAA88972.2| 316|Caenorhabditis elegans Hypothetical
protein T06D8.9 protein.
Length = 316
Score = 26.2 bits (55), Expect = 7.8
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +2
Query: 5 GSLAPAGPGTVWKRRAPGDHPAHNPERDAY 94
GS P GPG+ PG +P+ P D Y
Sbjct: 185 GSGGPGGPGSGGGGGGPGGYPSAPPPYDDY 214
>AF130443-1|AAD28468.1| 956|Caenorhabditis elegans EAG K+ channel
EGL-2 protein.
Length = 956
Score = 26.2 bits (55), Expect = 7.8
Identities = 17/71 (23%), Positives = 32/71 (45%)
Frame = -3
Query: 331 VVQLGSRRTIFS*RSERACALLTSSSRNVRVPIVTSINMWVTEAMK*ILKFDKSFSSIFQ 152
VV + + +F +A S+ NVR + ++M + + +L F K+F++ F
Sbjct: 620 VVAILGKGDVFGDEFWKANGSTGQSAANVRALTYSDLHMIKKDKLMDVLDFYKAFANSFA 679
Query: 151 FTIVARNNCTH 119
+ N TH
Sbjct: 680 RNMTLTYNLTH 690
>AF036695-1|AAB88348.2| 956|Caenorhabditis elegans Egg laying
defective protein 2 protein.
Length = 956
Score = 26.2 bits (55), Expect = 7.8
Identities = 17/71 (23%), Positives = 32/71 (45%)
Frame = -3
Query: 331 VVQLGSRRTIFS*RSERACALLTSSSRNVRVPIVTSINMWVTEAMK*ILKFDKSFSSIFQ 152
VV + + +F +A S+ NVR + ++M + + +L F K+F++ F
Sbjct: 620 VVAILGKGDVFGDEFWKANGSTGQSAANVRALTYSDLHMIKKDKLMDVLDFYKAFANSFA 679
Query: 151 FTIVARNNCTH 119
+ N TH
Sbjct: 680 RNMTLTYNLTH 690
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,850,682
Number of Sequences: 27780
Number of extensions: 178869
Number of successful extensions: 558
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 558
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 557037416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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