Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_D23
(508 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF063603-1|AAG43162.1| 168|Homo sapiens brain my045 protein pro... 32 1.3
U20657-1|AAB72237.1| 963|Homo sapiens ubiquitin protease protein. 31 2.3
BC125131-1|AAI25132.1| 963|Homo sapiens ubiquitin specific pept... 31 2.3
BC125130-1|AAI25131.1| 963|Homo sapiens ubiquitin specific pept... 31 2.3
BC028151-1|AAH28151.1| 446|Homo sapiens SFRS17A protein protein. 31 2.3
AL683807-1|CAI41499.1| 446|Homo sapiens chromosome X and Y open... 31 2.3
AL162586-10|CAI39769.1| 375|Homo sapiens folylpolyglutamate syn... 31 2.3
AK223292-1|BAD97012.1| 963|Homo sapiens ubiquitin specific prot... 31 2.3
AK222725-1|BAD96445.1| 916|Homo sapiens ubiquitin specific prot... 31 2.3
AF017306-1|AAC27356.1| 916|Homo sapiens UnpES protein. 31 2.3
AF017305-1|AAC27355.1| 963|Homo sapiens UnpEL protein. 31 2.3
BC034988-1|AAH34988.1| 1036|Homo sapiens ULK2 protein protein. 29 9.3
AB014523-1|BAA31598.2| 1100|Homo sapiens KIAA0623 protein protein. 29 9.3
>AF063603-1|AAG43162.1| 168|Homo sapiens brain my045 protein
protein.
Length = 168
Score = 31.9 bits (69), Expect = 1.3
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 118 RVA*WNVGMQLPLPALFVRGLPARAAVQELPAGAP 14
R+ W+ G+ PLP F GLP R E +G+P
Sbjct: 28 RIQPWHGGLLQPLPCSFEMGLPRRRFSSEAESGSP 62
>U20657-1|AAB72237.1| 963|Homo sapiens ubiquitin protease protein.
Length = 963
Score = 31.1 bits (67), Expect = 2.3
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 59 PAHKECRERQLHTDIPLCDAANDLCRATS 145
PA CR Q +PL A +DLC A S
Sbjct: 495 PADPHCRPTQYRVTVPLMGAVSDLCEALS 523
>BC125131-1|AAI25132.1| 963|Homo sapiens ubiquitin specific
peptidase 4 (proto-oncogene) protein.
Length = 963
Score = 31.1 bits (67), Expect = 2.3
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 59 PAHKECRERQLHTDIPLCDAANDLCRATS 145
PA CR Q +PL A +DLC A S
Sbjct: 495 PADPHCRPTQYRVTVPLMGAVSDLCEALS 523
>BC125130-1|AAI25131.1| 963|Homo sapiens ubiquitin specific
peptidase 4 (proto-oncogene) protein.
Length = 963
Score = 31.1 bits (67), Expect = 2.3
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 59 PAHKECRERQLHTDIPLCDAANDLCRATS 145
PA CR Q +PL A +DLC A S
Sbjct: 495 PADPHCRPTQYRVTVPLMGAVSDLCEALS 523
>BC028151-1|AAH28151.1| 446|Homo sapiens SFRS17A protein protein.
Length = 446
Score = 31.1 bits (67), Expect = 2.3
Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 6/46 (13%)
Frame = -3
Query: 125 RSPRRIMECRYAAAAPG-TLCARAPRPGCGS--RATCGR---AVAP 6
+S R I E A PG +LC+R PRPGC CGR AV+P
Sbjct: 371 QSIRLIAELLSRAKVPGGSLCSRQPRPGCPQCPPLKCGRRHGAVSP 416
>AL683807-1|CAI41499.1| 446|Homo sapiens chromosome X and Y open
reading frame 3 protein.
Length = 446
Score = 31.1 bits (67), Expect = 2.3
Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 6/46 (13%)
Frame = -3
Query: 125 RSPRRIMECRYAAAAPG-TLCARAPRPGCGS--RATCGR---AVAP 6
+S R I E A PG +LC+R PRPGC CGR AV+P
Sbjct: 371 QSIRLIAELLSRAKVPGGSLCSRQPRPGCPQCPPLKCGRRHGAVSP 416
>AL162586-10|CAI39769.1| 375|Homo sapiens folylpolyglutamate
synthase protein.
Length = 375
Score = 31.1 bits (67), Expect = 2.3
Identities = 23/50 (46%), Positives = 24/50 (48%), Gaps = 9/50 (18%)
Frame = -3
Query: 125 RSPRRIMECRYAAAAPGTLCARAP----RPGC-GSRATC----GRAVAPR 3
RS R C A +PGT R P RP C GS C GRAVAPR
Sbjct: 309 RSGRAGRRCCGAGPSPGTWTVRTPPAARRPACAGSARRCRAARGRAVAPR 358
>AK223292-1|BAD97012.1| 963|Homo sapiens ubiquitin specific
protease, proto-oncogene isoform a variant protein.
Length = 963
Score = 31.1 bits (67), Expect = 2.3
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 59 PAHKECRERQLHTDIPLCDAANDLCRATS 145
PA CR Q +PL A +DLC A S
Sbjct: 495 PADPHCRPTQYRVTVPLMGAVSDLCEALS 523
>AK222725-1|BAD96445.1| 916|Homo sapiens ubiquitin specific
protease, proto-oncogene isoform b variant protein.
Length = 916
Score = 31.1 bits (67), Expect = 2.3
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 59 PAHKECRERQLHTDIPLCDAANDLCRATS 145
PA CR Q +PL A +DLC A S
Sbjct: 448 PADPHCRPTQYRVTVPLMGAVSDLCEALS 476
>AF017306-1|AAC27356.1| 916|Homo sapiens UnpES protein.
Length = 916
Score = 31.1 bits (67), Expect = 2.3
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 59 PAHKECRERQLHTDIPLCDAANDLCRATS 145
PA CR Q +PL A +DLC A S
Sbjct: 448 PADPHCRPTQYRVTVPLMGAVSDLCEALS 476
>AF017305-1|AAC27355.1| 963|Homo sapiens UnpEL protein.
Length = 963
Score = 31.1 bits (67), Expect = 2.3
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 59 PAHKECRERQLHTDIPLCDAANDLCRATS 145
PA CR Q +PL A +DLC A S
Sbjct: 495 PADPHCRPTQYRVTVPLMGAVSDLCEALS 523
>BC034988-1|AAH34988.1| 1036|Homo sapiens ULK2 protein protein.
Length = 1036
Score = 29.1 bits (62), Expect = 9.3
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -2
Query: 135 RQRSFAASHNGMSVCSCRSRHSLCAGSPPGLRFKS 31
R S S++G S+C+ R +C GSPPG F S
Sbjct: 747 RTTSVGPSNSGGSLCAMSGR--VCVGSPPGPGFGS 779
>AB014523-1|BAA31598.2| 1100|Homo sapiens KIAA0623 protein protein.
Length = 1100
Score = 29.1 bits (62), Expect = 9.3
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -2
Query: 135 RQRSFAASHNGMSVCSCRSRHSLCAGSPPGLRFKS 31
R S S++G S+C+ R +C GSPPG F S
Sbjct: 811 RTTSVGPSNSGGSLCAMSGR--VCVGSPPGPGFGS 843
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,514,620
Number of Sequences: 237096
Number of extensions: 1322150
Number of successful extensions: 3432
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3432
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -