Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_D20
(633 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 342 2e-95
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 342 3e-95
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 342 3e-95
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 181 9e-47
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 178 5e-46
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 99 5e-22
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 49 5e-07
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 43 3e-05
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 42 7e-05
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 38 0.002
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 33 0.034
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 30 0.24
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.42
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 29 0.56
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 28 1.3
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 28 1.3
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 27 2.3
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 3.0
SPBC2F12.14c |gua1||IMP dehydrogenase Gua1 |Schizosaccharomyces ... 27 3.0
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 27 3.0
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 26 3.9
SPBC36.05c |clr6||histone deacetylase |Schizosaccharomyces pombe... 26 3.9
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 26 3.9
SPAC3A12.07 |rpb11||DNA-directed RNA polymerase II complex subun... 26 5.2
SPAC19G12.08 |||fatty acid hydroxylase |Schizosaccharomyces pomb... 26 5.2
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 26 5.2
SPAC6F6.09 |||NuA4 histone acetyltransferase complex subunit |Sc... 25 6.9
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 25 6.9
SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces po... 25 9.1
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 25 9.1
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 25 9.1
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 342 bits (841), Expect = 2e-95
Identities = 157/195 (80%), Positives = 176/195 (90%)
Frame = +2
Query: 44 GHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETGK 223
GHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVLDKLKAERERGITIDIALWKFET K
Sbjct: 25 GHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPK 84
Query: 224 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 403
Y VT+IDAPGHRDFIKNMITGTSQADCAVLI+ GTGEFEAGISK+GQTREHALLA+TLG
Sbjct: 85 YNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGISKDGQTREHALLAYTLG 144
Query: 404 VKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEP 583
VKQLIV VNKMD+T +S++RFEEI KE S++IKK+G+NP V FVP+SG+ GDNM+EP
Sbjct: 145 VKQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGFQGDNMIEP 202
Query: 584 STKMPWFKGWLVERK 628
+T MPW++GW E K
Sbjct: 203 TTNMPWYQGWQKETK 217
Score = 31.1 bits (67), Expect = 0.14
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1
Query: 10 GHVDSGKSTTTGSL 51
GHVDSGKSTTTG L
Sbjct: 14 GHVDSGKSTTTGHL 27
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 342 bits (840), Expect = 3e-95
Identities = 156/195 (80%), Positives = 176/195 (90%)
Frame = +2
Query: 44 GHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETGK 223
GHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVLDKLKAERERGITIDIALWKFET K
Sbjct: 25 GHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPK 84
Query: 224 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 403
Y VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+GQTREHALLA+TLG
Sbjct: 85 YNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTREHALLAYTLG 144
Query: 404 VKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEP 583
VKQLIV VNKMD+T +S++RFEEI KE S++IKK+G+NP V FVP+SG+ GDNM+EP
Sbjct: 145 VKQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGFQGDNMIEP 202
Query: 584 STKMPWFKGWLVERK 628
+T MPW++GW E K
Sbjct: 203 TTNMPWYQGWQKETK 217
Score = 31.1 bits (67), Expect = 0.14
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1
Query: 10 GHVDSGKSTTTGSL 51
GHVDSGKSTTTG L
Sbjct: 14 GHVDSGKSTTTGHL 27
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 342 bits (840), Expect = 3e-95
Identities = 156/195 (80%), Positives = 176/195 (90%)
Frame = +2
Query: 44 GHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETGK 223
GHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVLDKLKAERERGITIDIALWKFET K
Sbjct: 25 GHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPK 84
Query: 224 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 403
Y VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+GQTREHALLA+TLG
Sbjct: 85 YNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTREHALLAYTLG 144
Query: 404 VKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEP 583
VKQLIV VNKMD+T +S++RFEEI KE S++IKK+G+NP V FVP+SG+ GDNM+EP
Sbjct: 145 VKQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGFQGDNMIEP 202
Query: 584 STKMPWFKGWLVERK 628
+T MPW++GW E K
Sbjct: 203 TTNMPWYQGWQKETK 217
Score = 31.1 bits (67), Expect = 0.14
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1
Query: 10 GHVDSGKSTTTGSL 51
GHVDSGKSTTTG L
Sbjct: 14 GHVDSGKSTTTGHL 27
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 181 bits (440), Expect = 9e-47
Identities = 91/193 (47%), Positives = 123/193 (63%), Gaps = 3/193 (1%)
Frame = +2
Query: 41 LGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETG 220
LG ++++ G I+ R+++K EA GKGSF YAW+LD + ER RG+T+D+A FE+
Sbjct: 194 LGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTEEERARGVTMDVASTTFESD 253
Query: 221 KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTL 400
K I DAPGHRDFI MI G S AD AVL+V + FE G +NGQTREHA L L
Sbjct: 254 KKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLENGQTREHAYLLRAL 313
Query: 401 GVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSY-IKKIGYNPAAVAFVPISGWHGDNML 577
G+ +++V VNK+D +SE RF+EIK VS + IK +G+ + V FVPIS G N++
Sbjct: 314 GISEIVVSVNKLDLMS--WSEDRFQEIKNIVSDFLIKMVGFKTSNVHFVPISAISGTNLI 371
Query: 578 --EPSTKMPWFKG 610
+ S W+KG
Sbjct: 372 QKDSSDLYKWYKG 384
Score = 27.1 bits (57), Expect = 2.3
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 10 GHVDSGKSTTTGSLDLQMRWYRQTYHRKVREGSPGNG*G 126
GHVDSGKST G + ++ +K+ + +G G
Sbjct: 184 GHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKG 222
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 178 bits (434), Expect = 5e-46
Identities = 82/193 (42%), Positives = 129/193 (66%), Gaps = 4/193 (2%)
Frame = +2
Query: 44 GHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETGK 223
G++++ G +DKRT+EK E+EA+E GK S+ +W LD ERE+G T+++ FET
Sbjct: 256 GNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTSEEREKGKTVEVGRAYFETEH 315
Query: 224 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 403
+++DAPGH+ ++ NMI G SQAD VL+++A GEFEAG + GQTREHA+LA T G
Sbjct: 316 RRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGGQTREHAVLARTQG 375
Query: 404 VKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKI-GYNPAA-VAFVPISGWHGDNML 577
+ L+V +NKMD +SE R++E ++S +++++ GYN V ++P+S + G N+
Sbjct: 376 INHLVVVINKMDEPSVQWSEERYKECVDKLSMFLRRVAGYNSKTDVKYMPVSAYTGQNVK 435
Query: 578 E--PSTKMPWFKG 610
+ S+ PW++G
Sbjct: 436 DRVDSSVCPWYQG 448
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 99.1 bits (236), Expect = 5e-22
Identities = 53/130 (40%), Positives = 78/130 (60%)
Frame = +2
Query: 113 EMGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTS 292
++G+ SF +DK E+ RGITI A ++ET + +D PGH D+IKNMITG +
Sbjct: 79 DLGQASFMDYSQIDKAPEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAA 138
Query: 293 QADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRF 472
D A+++V+A G+ QTREH LLA +GVKQ++V +NK+D EP E
Sbjct: 139 TMDGAIIVVSATDGQMP-------QTREHLLLARQVGVKQIVVYINKVDMVEPDMIELVE 191
Query: 473 EEIKKEVSSY 502
E+++ +S Y
Sbjct: 192 MEMRELLSEY 201
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 49.2 bits (112), Expect = 5e-07
Identities = 36/98 (36%), Positives = 50/98 (51%)
Frame = +2
Query: 146 VLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 325
V+D L AER+RGITI+ A F + +ID PGH DF + + D AV I+
Sbjct: 67 VMDYLPAERQRGITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAII-- 124
Query: 326 GTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 439
+ AG+ QT+ A G+ ++I VNKMD
Sbjct: 125 ---DGSAGV--EAQTKVVWKQATKRGIPKVIF-VNKMD 156
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 43.2 bits (97), Expect = 3e-05
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +2
Query: 149 LDKLKAERERGITIDIA----LWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 316
LDKL+ ER RGIT+ ++ + Y + +ID PGH DF ++ + + +L+
Sbjct: 95 LDKLEVERRRGITVKAQTCSMIYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILL 154
Query: 317 VAAGTG 334
V A G
Sbjct: 155 VDASQG 160
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 41.9 bits (94), Expect = 7e-05
Identities = 23/93 (24%), Positives = 42/93 (45%)
Frame = +2
Query: 227 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 406
+V+ +D PGH + M+ G + D A+L++A QT EH + +
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQL 162
Query: 407 KQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYI 505
K +I+ NK+D +E ++ I K + +
Sbjct: 163 KHIIILQNKVDLIRESAAEEHYQSILKFIKGTV 195
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 37.5 bits (83), Expect = 0.002
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 119 GKGSFKYAWVLDKLKAERERGITIDIALWK--FETGKYYVTIIDAPGHRDFIKNMITGTS 292
GK + A+ + + GIT I + F+ G ++T +D PGH F G +
Sbjct: 183 GKTTLLDAFRKSTIASTEHGGITQKIGAFTVPFDKGSKFITFLDTPGHMAFEAMRKRGAN 242
Query: 293 QADCAVLIVAAGTG 334
AD VL+VA G
Sbjct: 243 IADIVVLVVAGDDG 256
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 33.1 bits (72), Expect = 0.034
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +2
Query: 224 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 379
Y + IID PGH DF + D AVL++ A +G I+ + Q R +
Sbjct: 145 YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 30.3 bits (65), Expect = 0.24
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 224 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 334
Y + +ID+PGH DF + + + D A ++V A G
Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 29.5 bits (63), Expect = 0.42
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 236 IIDAPGHRDFIKNMITGTSQADCAVLIV 319
IID PGH F GTS + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 29.1 bits (62), Expect = 0.56
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +2
Query: 152 DKLKAER-ERGITIDIALWKFETGKYYV--TIIDAPGHRDFIKN 274
+K++A+ E+ + I+I + E +++ T+ID PG DFI N
Sbjct: 60 EKVRAKHAEKTVEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 27.9 bits (59), Expect = 1.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 224 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 319
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 27.9 bits (59), Expect = 1.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 224 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 319
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 27.1 bits (57), Expect = 2.3
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -1
Query: 183 IPRSRSAFSLSNTQAYLKEPLPISWASFSNFSMVRLSIPPH 61
IP+ A S+ N++ + ++ LP + S V+L +P H
Sbjct: 173 IPKKNPARSVCNSKLFNEDTLPAEFEEVSISPPVKLELPTH 213
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 26.6 bits (56), Expect = 3.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 239 IDAPGHRDFIKNMITGTSQADCAVLIV 319
ID PGH DF+ + + +D VL+V
Sbjct: 214 IDTPGHVDFVDEVAAPMAISDGVVLVV 240
>SPBC2F12.14c |gua1||IMP dehydrogenase Gua1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 524
Score = 26.6 bits (56), Expect = 3.0
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +2
Query: 128 SFK-YAWVLDKLKA-ERERGITID-IALWKFETGKYYVTIIDAPGHRDFIKNMIT 283
+FK Y L+ LK E++ G++ID + F+ G + + PG+ DF+ N ++
Sbjct: 3 AFKPYTEALEVLKKYEKKDGLSIDDLIRHNFQGGLTFNDFLILPGYIDFVPNNVS 57
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 26.6 bits (56), Expect = 3.0
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 441 PLSHHTVSLDLRKSRRKSLPTSRKLVTIRLPSLS 542
P S +++ +K +LPTS K++T PS+S
Sbjct: 402 PTSFPSLTSSTKKIPSTTLPTSSKMITTTTPSVS 435
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 26.2 bits (55), Expect = 3.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 63 AVVSTNVPSKSSRRKPRKWVRVPS 134
A++S + K + +P KWV VPS
Sbjct: 224 ALISNGLKVKETSEEPEKWVVVPS 247
>SPBC36.05c |clr6||histone deacetylase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 405
Score = 26.2 bits (55), Expect = 3.9
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +1
Query: 7 GGHVDSGKSTTTGSLDLQMRWYRQTYHRKVREGS 108
GG + + + +G+ ++ + W +H K RE S
Sbjct: 112 GGSIGAAQELNSGNAEIAINWAGGLHHAKKREAS 145
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 26.2 bits (55), Expect = 3.9
Identities = 28/122 (22%), Positives = 55/122 (45%), Gaps = 2/122 (1%)
Frame = -1
Query: 498 EETSFLISSNRDSLYGGSVESILFTPTISCLTPSVKASRACSRVCPFFEIPAS-NSPVPA 322
E + + ISSN S S FT + S TP++ S + V + +S +SP+ +
Sbjct: 757 ETSGYTISSN-SSQNSASEPQTAFTSSSSSATPTITQSSISTSVSSQSSMNSSYSSPISS 815
Query: 321 ATISTAQSA*DVPVIMFLMKSLCPGASMMVT*YLPVSNFQRAISMVIPRSRSAFSL-SNT 145
+++++ S + I + P S + + + S F + S+F+L SN+
Sbjct: 816 NSVTSSTSI--ISSIASSSYTSIPSISSIASSFFDASGFTSIYNGTKAGFSSSFALASNS 873
Query: 144 QA 139
++
Sbjct: 874 ES 875
>SPAC3A12.07 |rpb11||DNA-directed RNA polymerase II complex subunit
Rpb11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 123
Score = 25.8 bits (54), Expect = 5.2
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = -3
Query: 310 HGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELP 203
+ AV DH L + ++ + D ++FAG+++P
Sbjct: 28 NAAVVTLEKEDHTLANMLANQLLSDERVLFAGYKVP 63
>SPAC19G12.08 |||fatty acid hydroxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 347
Score = 25.8 bits (54), Expect = 5.2
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +2
Query: 434 MDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWF 604
+D +P + F IKK+V Y+ ++ + P + G N LEP TK PW+
Sbjct: 107 LDLKKPLLPQILFGNIKKDV--YLDQV-HRPRHYRGSGSAPLFG-NFLEPLTKTPWY 159
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 25.8 bits (54), Expect = 5.2
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -1
Query: 213 SNFQRAISMVIPRSRSAFSLSNTQAYLKEPLPISWASFSNFSMV 82
S F IS+ +P FSL+ ++ K LPI W S + S V
Sbjct: 403 STFGVNISVGVPTGSITFSLNWSRLGQKISLPIMWCSVFDRSAV 446
>SPAC6F6.09 |||NuA4 histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 138
Score = 25.4 bits (53), Expect = 6.9
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 443 TEPPYSESRFEEIKKEVSSYIKK 511
+EPP + S +E+ KKE+ I+K
Sbjct: 9 SEPPVNVSYYEQCKKELHEMIEK 31
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting protein
3 homolog Bud6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1385
Score = 25.4 bits (53), Expect = 6.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 340 EFTSTSGDNKHGAVSLRRSSDHVLDE 263
+F S+ + K+G + SSD VLDE
Sbjct: 1234 DFVSSKRNGKNGGSFIEESSDTVLDE 1259
>SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 334
Score = 25.0 bits (52), Expect = 9.1
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = -3
Query: 313 KHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPE 200
K G V + + V+DE ++ ++D+G + AG ++ E
Sbjct: 236 KRGIVIVNTARGAVMDEAALVEALDEGIVYSAGLDVFE 273
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 25.0 bits (52), Expect = 9.1
Identities = 8/20 (40%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +1
Query: 184 HHRY-CSLEVRNRQILCHHH 240
HH++ C L V+N+++ H H
Sbjct: 196 HHKFFCDLCVKNKKVFTHEH 215
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 25.0 bits (52), Expect = 9.1
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +2
Query: 485 KEVS---SYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 610
KEVS SYI +P +G+ +N+++P + P FKG
Sbjct: 159 KEVSTSKSYISSGYLHPKTSPIFKKNGYATENVVDPISSSPRFKG 203
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,883,036
Number of Sequences: 5004
Number of extensions: 62989
Number of successful extensions: 265
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 257
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 281707720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -