Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_D18
         (437 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051821-1|AAK93245.1| 1343|Drosophila melanogaster LD33044p pro...    29   3.7  
AJ310804-1|CAC37791.1| 1343|Drosophila melanogaster Smad Anchor ...    29   3.7  
AF239997-1|AAF64468.1| 1343|Drosophila melanogaster smad anchor ...    29   3.7  
AE013599-3203|AAM70899.1| 1343|Drosophila melanogaster CG15667-P...    29   3.7  
AE013599-3202|AAF46725.2| 1343|Drosophila melanogaster CG15667-P...    29   3.7  

>AY051821-1|AAK93245.1| 1343|Drosophila melanogaster LD33044p protein.
          Length = 1343

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +2

Query: 38   CREWYHTR*GNCGVTSNIITQLKSKWHLCNLASLLRMFAGGG 163
            C +WY T  GNC   + I  QL     +  L  LL + A  G
Sbjct: 1239 CEDWYATNGGNCEEITRIAEQLARSASMA-LLPLLDLLAAAG 1279


>AJ310804-1|CAC37791.1| 1343|Drosophila melanogaster Smad Anchor for
            Receptor Activationprotein.
          Length = 1343

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +2

Query: 38   CREWYHTR*GNCGVTSNIITQLKSKWHLCNLASLLRMFAGGG 163
            C +WY T  GNC   + I  QL     +  L  LL + A  G
Sbjct: 1239 CEDWYATNGGNCEEITRIAEQLARSASMA-LLPLLDLLAAAG 1279


>AF239997-1|AAF64468.1| 1343|Drosophila melanogaster smad anchor for
            receptor activationprotein.
          Length = 1343

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +2

Query: 38   CREWYHTR*GNCGVTSNIITQLKSKWHLCNLASLLRMFAGGG 163
            C +WY T  GNC   + I  QL     +  L  LL + A  G
Sbjct: 1239 CEDWYATNGGNCEEITRIAEQLARSASMA-LLPLLDLLAAAG 1279


>AE013599-3203|AAM70899.1| 1343|Drosophila melanogaster CG15667-PB,
            isoform B protein.
          Length = 1343

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +2

Query: 38   CREWYHTR*GNCGVTSNIITQLKSKWHLCNLASLLRMFAGGG 163
            C +WY T  GNC   + I  QL     +  L  LL + A  G
Sbjct: 1239 CEDWYATNGGNCEEITRIAEQLARSASMA-LLPLLDLLAAAG 1279


>AE013599-3202|AAF46725.2| 1343|Drosophila melanogaster CG15667-PA,
            isoform A protein.
          Length = 1343

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +2

Query: 38   CREWYHTR*GNCGVTSNIITQLKSKWHLCNLASLLRMFAGGG 163
            C +WY T  GNC   + I  QL     +  L  LL + A  G
Sbjct: 1239 CEDWYATNGGNCEEITRIAEQLARSASMA-LLPLLDLLAAAG 1279


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,695,558
Number of Sequences: 53049
Number of extensions: 399978
Number of successful extensions: 896
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1396986582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)