Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_D17
         (501 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X15998-1|CAA34128.1| 2409|Homo sapiens protein ( H.sapiens mRNA ...    30   5.2  
U16306-1|AAA65018.1| 3396|Homo sapiens chondroitin sulfate prote...    30   5.2  
BX641036-1|CAE46022.1| 2060|Homo sapiens hypothetical protein pr...    30   5.2  
AB209491-1|BAD92728.1| 3410|Homo sapiens chondroitin sulfate pro...    30   5.2  
M84129-1|AAA61250.1|  289|Homo sapiens UDP-glucuronosyltransfera...    29   9.1  
AY435140-1|AAR95641.1|  534|Homo sapiens UDP glycosyltransferase...    29   9.1  
AF404268-1|AAQ03156.1|  289|Homo sapiens UDP-glucuronosyltransfe...    29   9.1  
AF404266-1|AAQ03154.1|  289|Homo sapiens UDP-glucuronosyltransfe...    29   9.1  
AF404265-1|AAQ03153.1|  289|Homo sapiens UDP-glucuronosyltransfe...    29   9.1  
AF404263-1|AAQ03151.1|  289|Homo sapiens UDP-glucuronosyltransfe...    29   9.1  
AF297093-9|AAG30421.1|  534|Homo sapiens UDP glucuronosyltransfe...    29   9.1  

>X15998-1|CAA34128.1| 2409|Homo sapiens protein ( H.sapiens mRNA for
           the chondroitin sulphate proteoglycan versican,  V1
           splice-variant; precursor peptide.  ).
          Length = 2409

 Score = 29.9 bits (64), Expect = 5.2
 Identities = 12/23 (52%), Positives = 18/23 (78%)
 Frame = -2

Query: 107 LFTDTNTLKSPGGQTTGQSDIYE 39
           +FT+TNTL++ G QTT  S I++
Sbjct: 805 VFTETNTLENLGAQTTEHSSIHQ 827


>U16306-1|AAA65018.1| 3396|Homo sapiens chondroitin sulfate
            proteoglycan versican V0 splice-variant precursor peptide
            protein.
          Length = 3396

 Score = 29.9 bits (64), Expect = 5.2
 Identities = 12/23 (52%), Positives = 18/23 (78%)
 Frame = -2

Query: 107  LFTDTNTLKSPGGQTTGQSDIYE 39
            +FT+TNTL++ G QTT  S I++
Sbjct: 1792 VFTETNTLENLGAQTTEHSSIHQ 1814


>BX641036-1|CAE46022.1| 2060|Homo sapiens hypothetical protein
           protein.
          Length = 2060

 Score = 29.9 bits (64), Expect = 5.2
 Identities = 12/23 (52%), Positives = 18/23 (78%)
 Frame = -2

Query: 107 LFTDTNTLKSPGGQTTGQSDIYE 39
           +FT+TNTL++ G QTT  S I++
Sbjct: 456 VFTETNTLENLGAQTTEHSSIHQ 478


>AB209491-1|BAD92728.1| 3410|Homo sapiens chondroitin sulfate
            proteoglycan 2 (versican) variant protein.
          Length = 3410

 Score = 29.9 bits (64), Expect = 5.2
 Identities = 12/23 (52%), Positives = 18/23 (78%)
 Frame = -2

Query: 107  LFTDTNTLKSPGGQTTGQSDIYE 39
            +FT+TNTL++ G QTT  S I++
Sbjct: 1806 VFTETNTLENLGAQTTEHSSIHQ 1828


>M84129-1|AAA61250.1|  289|Homo sapiens UDP-glucuronosyltransferase
           protein.
          Length = 289

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = -3

Query: 403 KMSVKN--SLIYHLIFIHLQIAQS*SKKAFILSW*VTITSPFPFCSTTVTIYTSIP 242
           +M++ N  SLI H   + L   ++  +     S+ V +T PF  C+  +  Y SIP
Sbjct: 113 RMAIMNNMSLIIHRSCVELLHNEALIRHLHATSFDVVLTDPFHLCAAVLAKYLSIP 168


>AY435140-1|AAR95641.1|  534|Homo sapiens UDP glycosyltransferase 1
           family polypeptide A5 protein.
          Length = 534

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = -3

Query: 403 KMSVKN--SLIYHLIFIHLQIAQS*SKKAFILSW*VTITSPFPFCSTTVTIYTSIP 242
           +M++ N  SLI H   + L   ++  +     S+ V +T PF  C+  +  Y SIP
Sbjct: 113 RMAIMNNMSLIIHRSCVELLHNEALIRHLHATSFDVVLTDPFHLCAAVLAKYLSIP 168


>AF404268-1|AAQ03156.1|  289|Homo sapiens
           UDP-glucuronosyltransferase protein.
          Length = 289

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = -3

Query: 403 KMSVKN--SLIYHLIFIHLQIAQS*SKKAFILSW*VTITSPFPFCSTTVTIYTSIP 242
           +M++ N  SLI H   + L   ++  +     S+ V +T PF  C+  +  Y SIP
Sbjct: 113 RMAIMNNMSLIIHRSCVELLHNEALIRHLHATSFDVVLTDPFHLCAAVLAKYLSIP 168


>AF404266-1|AAQ03154.1|  289|Homo sapiens
           UDP-glucuronosyltransferase protein.
          Length = 289

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = -3

Query: 403 KMSVKN--SLIYHLIFIHLQIAQS*SKKAFILSW*VTITSPFPFCSTTVTIYTSIP 242
           +M++ N  SLI H   + L   ++  +     S+ V +T PF  C+  +  Y SIP
Sbjct: 113 RMAIMNNMSLIIHRSCVELLHNEALIRHLHATSFDVVLTDPFHLCAAVLAKYLSIP 168


>AF404265-1|AAQ03153.1|  289|Homo sapiens
           UDP-glucuronosyltransferase protein.
          Length = 289

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = -3

Query: 403 KMSVKN--SLIYHLIFIHLQIAQS*SKKAFILSW*VTITSPFPFCSTTVTIYTSIP 242
           +M++ N  SLI H   + L   ++  +     S+ V +T PF  C+  +  Y SIP
Sbjct: 113 RMAIMNNMSLIIHRSCVELLHNEALIRHLHATSFDVVLTDPFHLCAAVLAKYLSIP 168


>AF404263-1|AAQ03151.1|  289|Homo sapiens
           UDP-glucuronosyltransferase protein.
          Length = 289

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = -3

Query: 403 KMSVKN--SLIYHLIFIHLQIAQS*SKKAFILSW*VTITSPFPFCSTTVTIYTSIP 242
           +M++ N  SLI H   + L   ++  +     S+ V +T PF  C+  +  Y SIP
Sbjct: 113 RMAIMNNMSLIIHRSCVELLHNEALIRHLHATSFDVVLTDPFHLCAAVLAKYLSIP 168


>AF297093-9|AAG30421.1|  534|Homo sapiens UDP
           glucuronosyltransferase 1A5 protein.
          Length = 534

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = -3

Query: 403 KMSVKN--SLIYHLIFIHLQIAQS*SKKAFILSW*VTITSPFPFCSTTVTIYTSIP 242
           +M++ N  SLI H   + L   ++  +     S+ V +T PF  C+  +  Y SIP
Sbjct: 113 RMAIMNNMSLIIHRSCVELLHNEALIRHLHATSFDVVLTDPFHLCAAVLAKYLSIP 168


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,836,402
Number of Sequences: 237096
Number of extensions: 1062556
Number of successful extensions: 2112
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2112
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)