Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_D15
(376 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT012478-1|AAS93749.1| 341|Drosophila melanogaster RE15368p pro... 77 6e-15
BT001612-1|AAN71367.1| 460|Drosophila melanogaster RE32823p pro... 77 6e-15
AF148814-1|AAF26671.1| 431|Drosophila melanogaster translation ... 77 6e-15
AF148813-1|AAF26670.1| 360|Drosophila melanogaster translation ... 77 6e-15
AE014297-4355|AAN14165.1| 431|Drosophila melanogaster CG11901-P... 77 6e-15
AE014297-4354|AAF56877.2| 431|Drosophila melanogaster CG11901-P... 77 6e-15
AY051537-1|AAK92961.1| 451|Drosophila melanogaster GH18995p pro... 30 1.1
AE013599-3746|AAF47111.1| 451|Drosophila melanogaster CG16783-P... 30 1.1
AF298216-1|AAG30224.1| 2130|Drosophila melanogaster DNA polymera... 27 7.9
AE014298-1761|AAN09307.1| 618|Drosophila melanogaster CG32651-P... 27 7.9
AE013599-501|AAF59191.2| 2130|Drosophila melanogaster CG1925-PA ... 27 7.9
>BT012478-1|AAS93749.1| 341|Drosophila melanogaster RE15368p
protein.
Length = 341
Score = 77.4 bits (182), Expect = 6e-15
Identities = 31/40 (77%), Positives = 38/40 (95%)
Frame = +2
Query: 257 ESKDPFDSMPKGSFNMDDFKRFYSNEEEAKSIPYFWEKFD 376
+SKDPFD++PKG+FN DDFKR YSNE+EAKSIPYF++KFD
Sbjct: 291 KSKDPFDALPKGTFNFDDFKRVYSNEDEAKSIPYFFDKFD 330
>BT001612-1|AAN71367.1| 460|Drosophila melanogaster RE32823p
protein.
Length = 460
Score = 77.4 bits (182), Expect = 6e-15
Identities = 31/40 (77%), Positives = 38/40 (95%)
Frame = +2
Query: 257 ESKDPFDSMPKGSFNMDDFKRFYSNEEEAKSIPYFWEKFD 376
+SKDPFD++PKG+FN DDFKR YSNE+EAKSIPYF++KFD
Sbjct: 300 KSKDPFDALPKGTFNFDDFKRVYSNEDEAKSIPYFFDKFD 339
>AF148814-1|AAF26671.1| 431|Drosophila melanogaster translation
elongation factor1 gamma protein.
Length = 431
Score = 77.4 bits (182), Expect = 6e-15
Identities = 31/40 (77%), Positives = 38/40 (95%)
Frame = +2
Query: 257 ESKDPFDSMPKGSFNMDDFKRFYSNEEEAKSIPYFWEKFD 376
+SKDPFD++PKG+FN DDFKR YSNE+EAKSIPYF++KFD
Sbjct: 271 KSKDPFDALPKGTFNFDDFKRVYSNEDEAKSIPYFFDKFD 310
>AF148813-1|AAF26670.1| 360|Drosophila melanogaster translation
elongation factor1 gamma protein.
Length = 360
Score = 77.4 bits (182), Expect = 6e-15
Identities = 31/40 (77%), Positives = 38/40 (95%)
Frame = +2
Query: 257 ESKDPFDSMPKGSFNMDDFKRFYSNEEEAKSIPYFWEKFD 376
+SKDPFD++PKG+FN DDFKR YSNE+EAKSIPYF++KFD
Sbjct: 200 KSKDPFDALPKGTFNFDDFKRVYSNEDEAKSIPYFFDKFD 239
>AE014297-4355|AAN14165.1| 431|Drosophila melanogaster CG11901-PB,
isoform B protein.
Length = 431
Score = 77.4 bits (182), Expect = 6e-15
Identities = 31/40 (77%), Positives = 38/40 (95%)
Frame = +2
Query: 257 ESKDPFDSMPKGSFNMDDFKRFYSNEEEAKSIPYFWEKFD 376
+SKDPFD++PKG+FN DDFKR YSNE+EAKSIPYF++KFD
Sbjct: 271 KSKDPFDALPKGTFNFDDFKRVYSNEDEAKSIPYFFDKFD 310
>AE014297-4354|AAF56877.2| 431|Drosophila melanogaster CG11901-PA,
isoform A protein.
Length = 431
Score = 77.4 bits (182), Expect = 6e-15
Identities = 31/40 (77%), Positives = 38/40 (95%)
Frame = +2
Query: 257 ESKDPFDSMPKGSFNMDDFKRFYSNEEEAKSIPYFWEKFD 376
+SKDPFD++PKG+FN DDFKR YSNE+EAKSIPYF++KFD
Sbjct: 271 KSKDPFDALPKGTFNFDDFKRVYSNEDEAKSIPYFFDKFD 310
>AY051537-1|AAK92961.1| 451|Drosophila melanogaster GH18995p
protein.
Length = 451
Score = 29.9 bits (64), Expect = 1.1
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +3
Query: 231 RKSLMRNPRSPKTRLTRCQRGLSIWMTSSVSILTKRRRNRFLTSGRS 371
R L R+ R+P T +TRC RG + V L NR+L SG S
Sbjct: 249 RSILQRDIRNPPTHITRCLRGHKL----EVCGLQWSPSNRYLASGGS 291
>AE013599-3746|AAF47111.1| 451|Drosophila melanogaster CG16783-PA
protein.
Length = 451
Score = 29.9 bits (64), Expect = 1.1
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +3
Query: 231 RKSLMRNPRSPKTRLTRCQRGLSIWMTSSVSILTKRRRNRFLTSGRS 371
R L R+ R+P T +TRC RG + V L NR+L SG S
Sbjct: 249 RSILQRDIRNPPTHITRCLRGHKL----EVCGLQWSPSNRYLASGGS 291
>AF298216-1|AAG30224.1| 2130|Drosophila melanogaster DNA polymerase
zeta catalyticsubunit protein.
Length = 2130
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 222 PL*RKSLMRNPRSPKTRLTRCQRGLSIWMTSSVS 323
P+ +KSL ++PR+PKT + L++ + SS S
Sbjct: 573 PIGQKSLPKSPRTPKTSAAKKYAPLALTIGSSSS 606
>AE014298-1761|AAN09307.1| 618|Drosophila melanogaster CG32651-PA
protein.
Length = 618
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 254 KESKDPFDSMPKGSFNMDDFKRFYSNEEEAKSIPYFWEKF 373
K+S DPFD F D RFY+ EE + + Y EK+
Sbjct: 310 KKSVDPFDK----EFATKDI-RFYTKEERSARLEYVNEKY 344
>AE013599-501|AAF59191.2| 2130|Drosophila melanogaster CG1925-PA
protein.
Length = 2130
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 222 PL*RKSLMRNPRSPKTRLTRCQRGLSIWMTSSVS 323
P+ +KSL ++PR+PKT + L++ + SS S
Sbjct: 573 PIGQKSLPKSPRTPKTSAAKKYAPLALTIGSSSS 606
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,546,209
Number of Sequences: 53049
Number of extensions: 232760
Number of successful extensions: 689
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 982468965
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -