Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_D12
         (505 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022634-1|AAY55050.1|  174|Drosophila melanogaster IP06990p pro...    29   3.6  
AE013599-2960|AAM68414.1|  174|Drosophila melanogaster CG30447-P...    29   3.6  

>BT022634-1|AAY55050.1|  174|Drosophila melanogaster IP06990p
           protein.
          Length = 174

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 13/50 (26%), Positives = 26/50 (52%)
 Frame = +3

Query: 339 VLRIY*TKKCAKELTTALNKLPSSPDFSQYFKIELYKRKYCEVALTRAAI 488
           + R++   KC++ L + +NK    P +S+  + ++ KR+     L R  I
Sbjct: 56  ITRVWNNFKCSRILASEINKKMEPPTYSESLESKIMKRRRLYALLNRKEI 105


>AE013599-2960|AAM68414.1|  174|Drosophila melanogaster CG30447-PA
           protein.
          Length = 174

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 13/50 (26%), Positives = 26/50 (52%)
 Frame = +3

Query: 339 VLRIY*TKKCAKELTTALNKLPSSPDFSQYFKIELYKRKYCEVALTRAAI 488
           + R++   KC++ L + +NK    P +S+  + ++ KR+     L R  I
Sbjct: 56  ITRVWNNFKCSRILASEINKKMEPPTYSESLESKIMKRRRLYALLNRKEI 105


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,550,363
Number of Sequences: 53049
Number of extensions: 341209
Number of successful extensions: 880
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1804766976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)