BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_D11
(289 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ276486-1|CAB90818.1| 364|Anopheles gambiae serine protease pr... 23 1.7
U43500-1|AAA93303.1| 280|Anopheles gambiae a-CD36 protein. 22 5.2
DQ139954-1|ABA29475.1| 451|Anopheles gambiae protein O-fucosylt... 22 5.2
AY341429-1|AAR03495.1| 193|Anopheles gambiae sulfakinin preprop... 21 6.9
AF457547-1|AAL68777.1| 163|Anopheles gambiae selenoprotein prot... 21 6.9
>AJ276486-1|CAB90818.1| 364|Anopheles gambiae serine protease
protein.
Length = 364
Score = 23.4 bits (48), Expect = 1.7
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 190 SDKEMCTGGITGA 228
SDK++C GG+ G+
Sbjct: 291 SDKQLCIGGLNGS 303
>U43500-1|AAA93303.1| 280|Anopheles gambiae a-CD36 protein.
Length = 280
Score = 21.8 bits (44), Expect = 5.2
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -3
Query: 254 RAGLVYSTAAPVMPPVHISLS 192
+ G VY T+ + PP+ +S S
Sbjct: 171 KCGEVYGTSGELWPPLAVSAS 191
>DQ139954-1|ABA29475.1| 451|Anopheles gambiae protein
O-fucosyltransferase 2 protein.
Length = 451
Score = 21.8 bits (44), Expect = 5.2
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +1
Query: 154 ENWTEDGVFI*NSDKEMCTGGITGAAVLY 240
E E+GVF+ ++ +C G GA +
Sbjct: 164 EQMFENGVFVDKFEEHVCPKGHDGALAYF 192
>AY341429-1|AAR03495.1| 193|Anopheles gambiae sulfakinin
preproprotein protein.
Length = 193
Score = 21.4 bits (43), Expect = 6.9
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 94 SLALAISLFFFMAIYY 47
+LALA+SL + A YY
Sbjct: 5 TLALAVSLAAYAAYYY 20
>AF457547-1|AAL68777.1| 163|Anopheles gambiae selenoprotein
protein.
Length = 163
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -2
Query: 186 LNKNTIFCPVLDNLSNYDILNTLE 115
L K+ +FC +LS+Y ++ E
Sbjct: 31 LIKSQLFCSACSSLSDYGLIELKE 54
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 291,901
Number of Sequences: 2352
Number of extensions: 4848
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 17384760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -