Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_D11
         (289 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    20   7.0  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    20   7.0  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    19   9.2  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              19   9.2  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    19   9.2  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 19.8 bits (39), Expect = 7.0
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +3

Query: 108 HRVPGYLIYHN*IN 149
           HR+P Y ++ N +N
Sbjct: 526 HRMPRYCLFGNTVN 539


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 19.8 bits (39), Expect = 7.0
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +3

Query: 108 HRVPGYLIYHN*IN 149
           HR+P Y ++ N +N
Sbjct: 526 HRMPRYCLFGNTVN 539


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 186 LNKNTIFCP 160
           LN  T+FCP
Sbjct: 305 LNATTLFCP 313


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 173 PSSVQFSIIYLIMI 132
           P +VQFS++Y  +I
Sbjct: 698 PINVQFSVLYGFVI 711


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 186 LNKNTIFCP 160
           LN  T+FCP
Sbjct: 395 LNATTLFCP 403


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,702
Number of Sequences: 438
Number of extensions: 1587
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5744526
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)