Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_D10
(528 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 283 7e-77
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 273 4e-74
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 267 3e-72
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 267 3e-72
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 266 9e-72
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 264 2e-71
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 188 2e-48
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 188 2e-48
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 137 4e-33
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 137 4e-33
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 136 7e-33
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 136 9e-33
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 135 2e-32
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 135 2e-32
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 131 3e-31
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 131 3e-31
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 129 1e-30
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 128 2e-30
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 128 2e-30
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 128 2e-30
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 128 2e-30
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 126 7e-30
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 122 1e-28
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 106 8e-24
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 104 5e-23
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 104 5e-23
U28943-17|AAK68292.2| 811|Caenorhabditis elegans Clc-type chlo... 30 1.2
U28943-16|AAK68291.1| 1001|Caenorhabditis elegans Clc-type chlo... 30 1.2
AF319614-1|AAG49524.1| 1001|Caenorhabditis elegans CLC-type chlo... 30 1.2
AF173172-1|AAF13165.1| 811|Caenorhabditis elegans CLC chloride ... 30 1.2
U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 28 4.8
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 283 bits (693), Expect = 7e-77
Identities = 126/134 (94%), Positives = 132/134 (98%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 250
MREIVHIQAGQCGNQIGAKFWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEASGGKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 251 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWANGHYTEGAELVDSVLDVV 430
PRA LVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWA GHYTEGAELVD+VLDVV
Sbjct: 61 PRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 431 RKESESCDCLQGFQ 472
RKE+ESCDCLQGFQ
Sbjct: 121 RKEAESCDCLQGFQ 134
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 273 bits (670), Expect = 4e-74
Identities = 120/134 (89%), Positives = 128/134 (95%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 250
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 251 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWANGHYTEGAELVDSVLDVV 430
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWA GHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 431 RKESESCDCLQGFQ 472
RKE+E CDCLQGFQ
Sbjct: 121 RKEAEGCDCLQGFQ 134
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 267 bits (655), Expect = 3e-72
Identities = 119/134 (88%), Positives = 127/134 (94%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 250
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 251 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWANGHYTEGAELVDSVLDVV 430
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWA GHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 431 RKESESCDCLQGFQ 472
RKE+ES DCLQGFQ
Sbjct: 121 RKEAESTDCLQGFQ 134
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 267 bits (655), Expect = 3e-72
Identities = 119/134 (88%), Positives = 127/134 (94%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 250
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 251 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWANGHYTEGAELVDSVLDVV 430
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWA GHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 431 RKESESCDCLQGFQ 472
RKE+ES DCLQGFQ
Sbjct: 121 RKEAESTDCLQGFQ 134
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 266 bits (651), Expect = 9e-72
Identities = 115/134 (85%), Positives = 127/134 (94%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 250
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 251 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWANGHYTEGAELVDSVLDVV 430
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWA GHYTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 431 RKESESCDCLQGFQ 472
RKE+E CDCLQGFQ
Sbjct: 121 RKEAEGCDCLQGFQ 134
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 264 bits (648), Expect = 2e-71
Identities = 114/134 (85%), Positives = 127/134 (94%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 250
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 251 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWANGHYTEGAELVDSVLDVV 430
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWA GHYTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 431 RKESESCDCLQGFQ 472
RKE+E CDCLQGFQ
Sbjct: 121 RKEAEGCDCLQGFQ 134
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 188 bits (459), Expect = 2e-48
Identities = 81/134 (60%), Positives = 106/134 (79%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 250
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 251 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWANGHYTEGAELVDSVLDVV 430
PRAILVDL+P +++ VRS +G++F P+N V G+SGAGNNW+ G+Y +GAE+VD VL V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 431 RKESESCDCLQGFQ 472
R+E+E+ D L+GFQ
Sbjct: 121 RREAEAADSLEGFQ 134
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 188 bits (459), Expect = 2e-48
Identities = 81/134 (60%), Positives = 106/134 (79%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 250
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 251 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWANGHYTEGAELVDSVLDVV 430
PRAILVDL+P +++ VRS +G++F P+N V G+SGAGNNW+ G+Y +GAE+VD VL V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 431 RKESESCDCLQGFQ 472
R+E+E+ D L+GFQ
Sbjct: 121 RREAEAADSLEGFQ 134
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 137 bits (332), Expect = 4e-33
Identities = 58/133 (43%), Positives = 84/133 (63%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 250
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 251 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWANGHYTEGAELVDSVLDVV 430
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 431 RKESESCDCLQGF 469
R+ +++C LQGF
Sbjct: 121 RRLADNCSGLQGF 133
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 137 bits (332), Expect = 4e-33
Identities = 58/133 (43%), Positives = 84/133 (63%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 250
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 251 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWANGHYTEGAELVDSVLDVV 430
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 431 RKESESCDCLQGF 469
R+ +++C LQGF
Sbjct: 121 RRLADNCSGLQGF 133
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 136 bits (330), Expect = 7e-33
Identities = 65/135 (48%), Positives = 85/135 (62%), Gaps = 2/135 (1%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGK 244
MREIV I GQ G QIG WE+ EHGI P G D+ +E N +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 245 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWANGHYTEGAELVDSVLD 424
+VPRAI VDLEP +D VR+G + ++F P+ + G+ A NN+A GHYT G EL+D V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 425 VVRKESESCDCLQGF 469
VR+ +E C LQGF
Sbjct: 121 RVRRLTERCQSLQGF 135
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 136 bits (329), Expect = 9e-33
Identities = 61/133 (45%), Positives = 87/133 (65%), Gaps = 1/133 (0%)
Frame = +2
Query: 74 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAY-HGDSDLQLERINVYYNEASGGKYV 250
RE V I GQ G QIG WE+ EHG+D G + + + + + +++E+ GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 251 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWANGHYTEGAELVDSVLDVV 430
PRAI VDLEP +D +R+G +G +F PD + G+ A NN+A GHYT G EL+D VLD +
Sbjct: 66 PRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRI 125
Query: 431 RKESESCDCLQGF 469
RK++E+C+ LQGF
Sbjct: 126 RKQTENCEGLQGF 138
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 135 bits (327), Expect = 2e-32
Identities = 58/133 (43%), Positives = 85/133 (63%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 250
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 251 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWANGHYTEGAELVDSVLDVV 430
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 431 RKESESCDCLQGF 469
R+ +++C LQGF
Sbjct: 121 RRLADNCSGLQGF 133
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 135 bits (327), Expect = 2e-32
Identities = 58/133 (43%), Positives = 85/133 (63%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 250
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 251 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWANGHYTEGAELVDSVLDVV 430
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 431 RKESESCDCLQGF 469
R+ +++C LQGF
Sbjct: 121 RRLADNCSGLQGF 133
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 131 bits (316), Expect = 3e-31
Identities = 55/133 (41%), Positives = 83/133 (62%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 250
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 251 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWANGHYTEGAELVDSVLDVV 430
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A GHYT G EL+D+ LD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 431 RKESESCDCLQGF 469
R+ +++C LQGF
Sbjct: 121 RRLADNCSGLQGF 133
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 131 bits (316), Expect = 3e-31
Identities = 55/133 (41%), Positives = 83/133 (62%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 250
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 251 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWANGHYTEGAELVDSVLDVV 430
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A GHYT G EL+D+ LD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 431 RKESESCDCLQGF 469
R+ +++C LQGF
Sbjct: 121 RRLADNCSGLQGF 133
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 129 bits (312), Expect = 1e-30
Identities = 62/140 (44%), Positives = 89/140 (63%), Gaps = 4/140 (2%)
Frame = +2
Query: 62 KYK-MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL---QLERINVYYNE 229
+YK RE++ I GQ G QIG WE+ EHGI P G YH + D + E IN ++ E
Sbjct: 3 QYKGSREVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAE 61
Query: 230 ASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWANGHYTEGAELV 409
+GGK+VPR + VDLEP +D VR+G + +F P+ + G+ A N +A G YT G E++
Sbjct: 62 TAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMI 121
Query: 410 DSVLDVVRKESESCDCLQGF 469
D V+D V++ +E+C+ LQGF
Sbjct: 122 DVVMDRVKRLAENCNGLQGF 141
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 128 bits (310), Expect = 2e-30
Identities = 56/135 (41%), Positives = 84/135 (62%), Gaps = 2/135 (1%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 244
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 245 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWANGHYTEGAELVDSVLD 424
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 425 VVRKESESCDCLQGF 469
+R+ +++C LQGF
Sbjct: 121 RIRRLADNCTGLQGF 135
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 128 bits (310), Expect = 2e-30
Identities = 58/136 (42%), Positives = 86/136 (63%), Gaps = 2/136 (1%)
Frame = +2
Query: 68 KMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGG 241
+ RE++ I GQ G Q+G WE+ EHGI P G + + L ++ N +++E G
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 242 KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWANGHYTEGAELVDSVL 421
K+VPRAI+VDLEP +D +R+G + +F P+ + G+ A NN+A GHYT G E++D V+
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVM 124
Query: 422 DVVRKESESCDCLQGF 469
D VR+ E+C LQGF
Sbjct: 125 DRVRRLVENCRGLQGF 140
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 128 bits (310), Expect = 2e-30
Identities = 56/135 (41%), Positives = 84/135 (62%), Gaps = 2/135 (1%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 244
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 245 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWANGHYTEGAELVDSVLD 424
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 425 VVRKESESCDCLQGF 469
+R+ +++C LQGF
Sbjct: 121 RIRRLADNCTGLQGF 135
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 128 bits (310), Expect = 2e-30
Identities = 56/135 (41%), Positives = 84/135 (62%), Gaps = 2/135 (1%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 244
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 245 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWANGHYTEGAELVDSVLD 424
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 425 VVRKESESCDCLQGF 469
+R+ +++C LQGF
Sbjct: 121 RIRRLADNCTGLQGF 135
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 126 bits (305), Expect = 7e-30
Identities = 55/134 (41%), Positives = 83/134 (61%), Gaps = 2/134 (1%)
Frame = +2
Query: 74 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 247
RE++ I GQ G QIG WE+ EHGI P G D L + + +++E G++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 248 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWANGHYTEGAELVDSVLDV 427
VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A GHYT G E++D LD
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 428 VRKESESCDCLQGF 469
+R+ +++C LQGF
Sbjct: 121 IRRLADNCTGLQGF 134
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 122 bits (295), Expect = 1e-28
Identities = 54/133 (40%), Positives = 84/133 (63%)
Frame = +2
Query: 71 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 250
MRE++ I GQ G QIG WE+ EHGI P G + D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGTSM-EPDGNSGSLGTFFSDTGYGRHV 59
Query: 251 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWANGHYTEGAELVDSVLDVV 430
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A GHYT G E++D+ LD +
Sbjct: 60 PRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRI 119
Query: 431 RKESESCDCLQGF 469
R+ + +C+ LQGF
Sbjct: 120 RRLANNCEGLQGF 132
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 106 bits (255), Expect = 8e-24
Identities = 49/110 (44%), Positives = 72/110 (65%), Gaps = 3/110 (2%)
Frame = +2
Query: 149 EHGIDPTGAYHGDSDL---QLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQ 319
EHGI P G YH + D + E IN ++ E +GGK+VPR + VDLEP +D VR+G +
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRS 63
Query: 320 IFRPDNFVFGQSGAGNNWANGHYTEGAELVDSVLDVVRKESESCDCLQGF 469
+F P+ + G+ A N +A G YT G E++D V+D V++ +E+C+ LQGF
Sbjct: 64 LFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGF 113
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 104 bits (249), Expect = 5e-23
Identities = 49/132 (37%), Positives = 80/132 (60%), Gaps = 3/132 (2%)
Frame = +2
Query: 80 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 259
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 260 ILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWANGHYTEGAELVDSVLDVV 430
+LVDLEP ++ + P F +F DN GAGNNWA+G Y +G E+ + ++D++
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDII 124
Query: 431 RKESESCDCLQG 466
+E+E+ + L G
Sbjct: 125 IREAENTNNLDG 136
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 104 bits (249), Expect = 5e-23
Identities = 49/132 (37%), Positives = 80/132 (60%), Gaps = 3/132 (2%)
Frame = +2
Query: 80 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 259
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 260 ILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWANGHYTEGAELVDSVLDVV 430
+LVDLEP ++ + P F +F DN GAGNNWA+G Y +G E+ + ++D++
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDII 124
Query: 431 RKESESCDCLQG 466
+E+E+ + L G
Sbjct: 125 IREAENTNNLDG 136
>U28943-17|AAK68292.2| 811|Caenorhabditis elegans Clc-type
chloride channel protein3, isoform b protein.
Length = 811
Score = 29.9 bits (64), Expect = 1.2
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = -3
Query: 403 LSALCVVSIGPVVTGAGLSENK-----VVRAEYLSERSRTNRVHGAGLEVDEDGAGHVLA 239
LSA+C I P G+G+ E K V+ EYLS R+ +++ G L + G+G +
Sbjct: 180 LSAVCAHYIAPQAIGSGIPEMKTILRGVILKEYLSVRTLLSKMIGLTLSL---GSGLPMG 236
Query: 238 SGGLIVINIDALKLQV-RIAVVCTGGV 161
G V + Q+ R+ +GG+
Sbjct: 237 KEGPFVHVASVVASQLTRLVHGSSGGI 263
>U28943-16|AAK68291.1| 1001|Caenorhabditis elegans Clc-type
chloride channel protein3, isoform a protein.
Length = 1001
Score = 29.9 bits (64), Expect = 1.2
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = -3
Query: 403 LSALCVVSIGPVVTGAGLSENK-----VVRAEYLSERSRTNRVHGAGLEVDEDGAGHVLA 239
LSA+C I P G+G+ E K V+ EYLS R+ +++ G L + G+G +
Sbjct: 109 LSAVCAHYIAPQAIGSGIPEMKTILRGVILKEYLSVRTLLSKMIGLTLSL---GSGLPMG 165
Query: 238 SGGLIVINIDALKLQV-RIAVVCTGGV 161
G V + Q+ R+ +GG+
Sbjct: 166 KEGPFVHVASVVASQLTRLVHGSSGGI 192
>AF319614-1|AAG49524.1| 1001|Caenorhabditis elegans CLC-type
chloride channel CLH-3b protein.
Length = 1001
Score = 29.9 bits (64), Expect = 1.2
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = -3
Query: 403 LSALCVVSIGPVVTGAGLSENK-----VVRAEYLSERSRTNRVHGAGLEVDEDGAGHVLA 239
LSA+C I P G+G+ E K V+ EYLS R+ +++ G L + G+G +
Sbjct: 109 LSAVCAHYIAPQAIGSGIPEMKTILRGVILKEYLSVRTLLSKMIGLTLSL---GSGLPMG 165
Query: 238 SGGLIVINIDALKLQV-RIAVVCTGGV 161
G V + Q+ R+ +GG+
Sbjct: 166 KEGPFVHVASVVASQLTRLVHGSSGGI 192
>AF173172-1|AAF13165.1| 811|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 811
Score = 29.9 bits (64), Expect = 1.2
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = -3
Query: 403 LSALCVVSIGPVVTGAGLSENK-----VVRAEYLSERSRTNRVHGAGLEVDEDGAGHVLA 239
LSA+C I P G+G+ E K V+ EYLS R+ +++ G L + G+G +
Sbjct: 180 LSAVCAHYIAPQAIGSGIPEMKTILRGVILKEYLSVRTLLSKMIGLTLSL---GSGLPMG 236
Query: 238 SGGLIVINIDALKLQV-RIAVVCTGGV 161
G V + Q+ R+ +GG+
Sbjct: 237 KEGPFVHVASVVASQLTRLVHGSSGGI 263
>U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical
protein T02G5.7 protein.
Length = 390
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = -3
Query: 253 GHVLASGGLIVINIDALKL---QVRIAVVCTGGVDAVLV 146
GH L GL ++N A L Q+ +A +C GG +A V
Sbjct: 347 GHPLGMSGLRIVNSLAYSLAPGQLGVAAICNGGGEATAV 385
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +2
Query: 137 IISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDL 274
I S+ H I T + H DS R + GG + R IL+D+
Sbjct: 101 IASEHHHISTTSSCHSDSGNSSSRDVITPFTVHGGASIGRLILIDI 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,274,541
Number of Sequences: 27780
Number of extensions: 223610
Number of successful extensions: 765
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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