Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_D06
(167 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 20 2.4
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 20 3.2
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 20 3.2
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 20 3.2
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 20 3.2
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 20 3.2
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 20 3.2
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 20 3.2
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 20 3.2
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 20 3.2
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 20 3.2
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 20 3.2
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 20 3.2
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 20 3.2
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 20 3.2
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 19 4.2
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 19 5.6
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 19 5.6
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 19 7.3
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 18 9.7
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 20.2 bits (40), Expect = 2.4
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +1
Query: 115 NSLIYIQDHK 144
N+L+Y+ DHK
Sbjct: 198 NTLVYMADHK 207
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 19.8 bits (39), Expect = 3.2
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 16 MYTVYKYIVILCIL*HI 66
++TV IVILC HI
Sbjct: 442 LFTVLATIVILCRAPHI 458
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 19.8 bits (39), Expect = 3.2
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 16 MYTVYKYIVILCIL*HI 66
++TV IVILC HI
Sbjct: 442 LFTVLATIVILCRAPHI 458
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 19.8 bits (39), Expect = 3.2
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 16 MYTVYKYIVILCIL*HI 66
++TV IVILC HI
Sbjct: 442 LFTVLATIVILCRAPHI 458
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 19.8 bits (39), Expect = 3.2
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 16 MYTVYKYIVILCIL*HI 66
++TV IVILC HI
Sbjct: 442 LFTVLATIVILCRAPHI 458
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 19.8 bits (39), Expect = 3.2
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 16 MYTVYKYIVILCIL*HI 66
++TV IVILC HI
Sbjct: 442 LFTVLATIVILCRAPHI 458
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 19.8 bits (39), Expect = 3.2
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 16 MYTVYKYIVILCIL*HI 66
++TV IVILC HI
Sbjct: 442 LFTVLATIVILCRAPHI 458
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 19.8 bits (39), Expect = 3.2
Identities = 6/22 (27%), Positives = 14/22 (63%)
Frame = +1
Query: 70 NLSDKKSDNNCRRQVNSLIYIQ 135
N ++ +NNC++ ++ YI+
Sbjct: 99 NYNNNNYNNNCKKLYYNINYIE 120
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 19.8 bits (39), Expect = 3.2
Identities = 6/22 (27%), Positives = 14/22 (63%)
Frame = +1
Query: 70 NLSDKKSDNNCRRQVNSLIYIQ 135
N ++ +NNC++ ++ YI+
Sbjct: 99 NYNNNNYNNNCKKLYYNINYIE 120
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 19.8 bits (39), Expect = 3.2
Identities = 6/22 (27%), Positives = 14/22 (63%)
Frame = +1
Query: 70 NLSDKKSDNNCRRQVNSLIYIQ 135
N ++ +NNC++ ++ YI+
Sbjct: 99 NYNNNNYNNNCKKLYYNINYIE 120
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 19.8 bits (39), Expect = 3.2
Identities = 6/22 (27%), Positives = 14/22 (63%)
Frame = +1
Query: 70 NLSDKKSDNNCRRQVNSLIYIQ 135
N ++ +NNC++ ++ YI+
Sbjct: 99 NYNNNNYNNNCKKLYYNINYIE 120
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.8 bits (39), Expect = 3.2
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 16 MYTVYKYIVILCIL*HI 66
++TV IVILC HI
Sbjct: 510 LFTVLATIVILCRAPHI 526
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.8 bits (39), Expect = 3.2
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 16 MYTVYKYIVILCIL*HI 66
++TV IVILC HI
Sbjct: 510 LFTVLATIVILCRAPHI 526
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 19.8 bits (39), Expect = 3.2
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +1
Query: 91 DNNCRRQVNSLIYIQDHKYL 150
+N+ R+ NS+ I + KYL
Sbjct: 25 ENSPRKLANSMNVIHEWKYL 44
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 19.8 bits (39), Expect = 3.2
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
Frame = +1
Query: 61 HIGNLSDKKSD----NNCRRQVNSLIYIQDHK 144
HI N+ + S N C+R +SL +++HK
Sbjct: 21 HIQNVHTRPSKEPICNICKRVYSSLNSLRNHK 52
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 19.4 bits (38), Expect = 4.2
Identities = 6/18 (33%), Positives = 13/18 (72%)
Frame = +1
Query: 61 HIGNLSDKKSDNNCRRQV 114
+I N+S+ +DNN +++
Sbjct: 89 YISNISNYNNDNNYNKKL 106
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 19.0 bits (37), Expect = 5.6
Identities = 7/25 (28%), Positives = 15/25 (60%)
Frame = +1
Query: 73 LSDKKSDNNCRRQVNSLIYIQDHKY 147
L++ K DN + +++ I +H+Y
Sbjct: 429 LTEPKKDNKRKLSDSTMNKINNHEY 453
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 19.0 bits (37), Expect = 5.6
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1
Query: 52 IL*HIGNLSDKKSDNNCRRQVNSLIYIQDHKYL 150
+L ++G +D + R NSL I + KY+
Sbjct: 6 LLMYLGITCQGVTDIHSRNLTNSLKVIYEWKYI 38
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 18.6 bits (36), Expect = 7.3
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = +1
Query: 37 IVILCIL*HIGNLSDK 84
++++C+L G+ SDK
Sbjct: 1602 VIVICVLRGKGHGSDK 1617
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 18.2 bits (35), Expect = 9.7
Identities = 7/25 (28%), Positives = 13/25 (52%)
Frame = +1
Query: 61 HIGNLSDKKSDNNCRRQVNSLIYIQ 135
H N +NNC++ ++ YI+
Sbjct: 91 HNNNNYKYNYNNNCKKLYYNINYIE 115
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,113
Number of Sequences: 438
Number of extensions: 591
Number of successful extensions: 20
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 35
effective length of database: 131,013
effective search space used: 2620260
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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