Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_D04
(519 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67698-1|CAA47928.1| 151|Homo sapiens protein ( H.sapiens tissu... 100 3e-21
BC002532-1|AAH02532.1| 151|Homo sapiens Niemann-Pick disease, t... 100 3e-21
AK222474-1|BAD96194.1| 151|Homo sapiens Niemann-Pick disease, t... 99 5e-21
U53209-1|AAC50658.1| 282|Homo sapiens transformer-2 alpha protein. 33 0.60
BC017094-1|AAH17094.1| 282|Homo sapiens transformer-2 alpha pro... 33 0.60
AC023105-1|AAQ96870.1| 282|Homo sapiens unknown protein. 33 0.60
AB097048-1|BAC77401.1| 282|Homo sapiens putative MAPK activatin... 33 0.60
BC064028-1|AAH64028.1| 237|Homo sapiens immediate early respons... 31 3.2
AL158151-18|CAI12875.1| 404|Homo sapiens immediate early respon... 31 3.2
AK128083-1|BAC87264.1| 225|Homo sapiens protein ( Homo sapiens ... 30 4.2
BX641020-1|CAE46013.1| 602|Homo sapiens hypothetical protein pr... 30 5.6
BC036831-1|AAH36831.1| 716|Homo sapiens ARID5B protein protein. 30 5.6
AL671972-2|CAH72686.1| 1188|Homo sapiens modulator recognition f... 30 5.6
AL671972-1|CAH72685.1| 945|Homo sapiens modulator recognition f... 30 5.6
BC125196-1|AAI25197.1| 418|Homo sapiens transmembrane protease,... 29 9.8
BC125195-1|AAI25196.1| 418|Homo sapiens transmembrane protease,... 29 9.8
AC096653-1|AAY40996.1| 230|Homo sapiens unknown protein. 29 9.8
AB002134-1|BAA28691.1| 418|Homo sapiens airway trypsin-like pro... 29 9.8
>X67698-1|CAA47928.1| 151|Homo sapiens protein ( H.sapiens tissue
specific mRNA. ).
Length = 151
Score = 100 bits (240), Expect = 3e-21
Identities = 44/127 (34%), Positives = 74/127 (58%)
Frame = +3
Query: 114 YKDCGSQLATVQTVMVTGCSQDAKECVLRRNSNVSMNIEFTPNQELTSITTDVHGVMMNM 293
+KDCGS ++ V V+ C + C L + + S+N+ FT N + S VHG++M +
Sbjct: 24 FKDCGSVDGVIKEVNVSPCP--TQPCQLSKGQSYSVNVTFTSNIQSKSSKAVVHGILMGV 81
Query: 294 PIPFPLADRDACKDKGLTCPLQPNVLANYTATLPVLKSYPKVSVDVKWELKNENNVDIIC 473
P+PFP+ + D CK G+ CP+Q + +Y LPV YP + + V+W+L+++ N + C
Sbjct: 82 PVPFPIPEPDGCK-SGINCPIQKDKTYSYLNKLPVKSEYPSIKLVVEWQLQDDKNQSLFC 140
Query: 474 ILVPSRI 494
+P +I
Sbjct: 141 WEIPVQI 147
>BC002532-1|AAH02532.1| 151|Homo sapiens Niemann-Pick disease, type
C2 protein.
Length = 151
Score = 100 bits (240), Expect = 3e-21
Identities = 44/127 (34%), Positives = 74/127 (58%)
Frame = +3
Query: 114 YKDCGSQLATVQTVMVTGCSQDAKECVLRRNSNVSMNIEFTPNQELTSITTDVHGVMMNM 293
+KDCGS ++ V V+ C + C L + + S+N+ FT N + S VHG++M +
Sbjct: 24 FKDCGSVDGVIKEVNVSPCP--TQPCQLSKGQSYSVNVTFTSNIQSKSSKAVVHGILMGV 81
Query: 294 PIPFPLADRDACKDKGLTCPLQPNVLANYTATLPVLKSYPKVSVDVKWELKNENNVDIIC 473
P+PFP+ + D CK G+ CP+Q + +Y LPV YP + + V+W+L+++ N + C
Sbjct: 82 PVPFPIPEPDGCK-SGINCPIQKDKTYSYLNKLPVKSEYPSIKLVVEWQLQDDKNQSLFC 140
Query: 474 ILVPSRI 494
+P +I
Sbjct: 141 WEIPVQI 147
>AK222474-1|BAD96194.1| 151|Homo sapiens Niemann-Pick disease, type
C2 precursor variant protein.
Length = 151
Score = 99 bits (238), Expect = 5e-21
Identities = 43/127 (33%), Positives = 74/127 (58%)
Frame = +3
Query: 114 YKDCGSQLATVQTVMVTGCSQDAKECVLRRNSNVSMNIEFTPNQELTSITTDVHGVMMNM 293
++DCGS ++ V V+ C + C L + + S+N+ FT N + S VHG++M +
Sbjct: 24 FRDCGSVDGVIKEVNVSPCP--TQPCQLSKGQSYSVNVTFTSNVQSKSSKAVVHGILMGV 81
Query: 294 PIPFPLADRDACKDKGLTCPLQPNVLANYTATLPVLKSYPKVSVDVKWELKNENNVDIIC 473
P+PFP+ + D CK G+ CP+Q + +Y LPV YP + + V+W+L+++ N + C
Sbjct: 82 PVPFPIPEPDGCK-SGINCPIQKDKTYSYLNKLPVKSEYPSIKLVVEWQLQDDKNQSLFC 140
Query: 474 ILVPSRI 494
+P +I
Sbjct: 141 WEIPVQI 147
>U53209-1|AAC50658.1| 282|Homo sapiens transformer-2 alpha protein.
Length = 282
Score = 33.1 bits (72), Expect = 0.60
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +2
Query: 212 RQHEHRIHSESRAHQHNHRR 271
R+H HR ++ SR+H H+HRR
Sbjct: 61 RRHSHRRYTRSRSHSHSHRR 80
>BC017094-1|AAH17094.1| 282|Homo sapiens transformer-2 alpha
protein.
Length = 282
Score = 33.1 bits (72), Expect = 0.60
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +2
Query: 212 RQHEHRIHSESRAHQHNHRR 271
R+H HR ++ SR+H H+HRR
Sbjct: 61 RRHSHRRYTRSRSHSHSHRR 80
>AC023105-1|AAQ96870.1| 282|Homo sapiens unknown protein.
Length = 282
Score = 33.1 bits (72), Expect = 0.60
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +2
Query: 212 RQHEHRIHSESRAHQHNHRR 271
R+H HR ++ SR+H H+HRR
Sbjct: 61 RRHSHRRYTRSRSHSHSHRR 80
>AB097048-1|BAC77401.1| 282|Homo sapiens putative MAPK activating
protein protein.
Length = 282
Score = 33.1 bits (72), Expect = 0.60
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +2
Query: 212 RQHEHRIHSESRAHQHNHRR 271
R+H HR ++ SR+H H+HRR
Sbjct: 61 RRHSHRRYTRSRSHSHSHRR 80
>BC064028-1|AAH64028.1| 237|Homo sapiens immediate early response
5-like protein.
Length = 237
Score = 30.7 bits (66), Expect = 3.2
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +2
Query: 194 AAKKQ*RQ-HE-HRIHSESRAHQHNHRRPRG 280
AA+ Q Q H+ H++H + + HQH H PRG
Sbjct: 106 AARHQLHQLHQLHQLHLQQQLHQHQHPAPRG 136
>AL158151-18|CAI12875.1| 404|Homo sapiens immediate early response
5-like protein.
Length = 404
Score = 30.7 bits (66), Expect = 3.2
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +2
Query: 194 AAKKQ*RQ-HE-HRIHSESRAHQHNHRRPRG 280
AA+ Q Q H+ H++H + + HQH H PRG
Sbjct: 106 AARHQLHQLHQLHQLHLQQQLHQHQHPAPRG 136
>AK128083-1|BAC87264.1| 225|Homo sapiens protein ( Homo sapiens
cDNA FLJ46204 fis, clone TESTI4009501. ).
Length = 225
Score = 30.3 bits (65), Expect = 4.2
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 218 HEHRIHSESRAHQHNHRRPRGDDEHAHT 301
H H H+ + AH H H R HAHT
Sbjct: 114 HMHT-HAHTHAHTHGHTHTRAHSTHAHT 140
>BX641020-1|CAE46013.1| 602|Homo sapiens hypothetical protein
protein.
Length = 602
Score = 29.9 bits (64), Expect = 5.6
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +3
Query: 267 DVHGVMMNMPIPFPLADRDACKDKGLTCPLQPNVLANYTATL 392
D+H + P + D KDK LT P+ N NYT L
Sbjct: 51 DIHNALKQTPKVLVVQSFDMFKDKDLTGPMNENHGLNYTPLL 92
>BC036831-1|AAH36831.1| 716|Homo sapiens ARID5B protein protein.
Length = 716
Score = 29.9 bits (64), Expect = 5.6
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +3
Query: 267 DVHGVMMNMPIPFPLADRDACKDKGLTCPLQPNVLANYTATL 392
D+H + P + D KDK LT P+ N NYT L
Sbjct: 165 DIHNALKQTPKVLVVQSFDMFKDKDLTGPMNENHGLNYTPLL 206
>AL671972-2|CAH72686.1| 1188|Homo sapiens modulator recognition
factor 2 (MRF2) protein.
Length = 1188
Score = 29.9 bits (64), Expect = 5.6
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +3
Query: 267 DVHGVMMNMPIPFPLADRDACKDKGLTCPLQPNVLANYTATL 392
D+H + P + D KDK LT P+ N NYT L
Sbjct: 637 DIHNALKQTPKVLVVQSFDMFKDKDLTGPMNENHGLNYTPLL 678
>AL671972-1|CAH72685.1| 945|Homo sapiens modulator recognition
factor 2 (MRF2) protein.
Length = 945
Score = 29.9 bits (64), Expect = 5.6
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +3
Query: 267 DVHGVMMNMPIPFPLADRDACKDKGLTCPLQPNVLANYTATL 392
D+H + P + D KDK LT P+ N NYT L
Sbjct: 394 DIHNALKQTPKVLVVQSFDMFKDKDLTGPMNENHGLNYTPLL 435
>BC125196-1|AAI25197.1| 418|Homo sapiens transmembrane protease,
serine 11D protein.
Length = 418
Score = 29.1 bits (62), Expect = 9.8
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 165 GCSQDAK-ECVLRRNSNVSMNIEFTPNQELTSIT 263
G S ++ E VLR+ N S N+E P+ E+TS+T
Sbjct: 128 GASMKSRIESVLRQMLNNSGNLEINPSTEITSLT 161
>BC125195-1|AAI25196.1| 418|Homo sapiens transmembrane protease,
serine 11D protein.
Length = 418
Score = 29.1 bits (62), Expect = 9.8
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 165 GCSQDAK-ECVLRRNSNVSMNIEFTPNQELTSIT 263
G S ++ E VLR+ N S N+E P+ E+TS+T
Sbjct: 128 GASMKSRIESVLRQMLNNSGNLEINPSTEITSLT 161
>AC096653-1|AAY40996.1| 230|Homo sapiens unknown protein.
Length = 230
Score = 29.1 bits (62), Expect = 9.8
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 165 GCSQDAK-ECVLRRNSNVSMNIEFTPNQELTSIT 263
G S ++ E VLR+ N S N+E P+ E+TS+T
Sbjct: 128 GASMKSRIESVLRQMLNNSGNLEINPSTEITSLT 161
>AB002134-1|BAA28691.1| 418|Homo sapiens airway trypsin-like
protease protein.
Length = 418
Score = 29.1 bits (62), Expect = 9.8
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 165 GCSQDAK-ECVLRRNSNVSMNIEFTPNQELTSIT 263
G S ++ E VLR+ N S N+E P+ E+TS+T
Sbjct: 128 GASMKSRIESVLRQMLNNSGNLEINPSTEITSLT 161
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,009,097
Number of Sequences: 237096
Number of extensions: 1608987
Number of successful extensions: 7610
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 7362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7588
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4933413474
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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