Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_D03
(540 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC033217-1|AAH33217.1| 611|Homo sapiens SARDH protein protein. 111 1e-24
AL590710-3|CAI12276.1| 918|Homo sapiens sarcosine dehydrogenase... 111 1e-24
AL365494-4|CAI13356.1| 918|Homo sapiens sarcosine dehydrogenase... 111 1e-24
AK223402-1|BAD97122.1| 918|Homo sapiens sarcosine dehydrogenase... 111 1e-24
AF095735-1|AAD53398.2| 918|Homo sapiens sarcosine dehydrogenase... 111 1e-24
AF162428-1|AAD43585.1| 918|Homo sapiens sarcosine dehydrogenase... 111 2e-24
AF140745-1|AAD32214.1| 918|Homo sapiens sarcosine dehydrogenase... 111 2e-24
AF129265-1|AAD33412.1| 602|Homo sapiens unknown protein. 111 2e-24
AL590710-1|CAI12274.1| 368|Homo sapiens sarcosine dehydrogenase... 75 2e-13
AL365494-3|CAI13355.1| 368|Homo sapiens sarcosine dehydrogenase... 75 2e-13
AL590710-2|CAI12275.1| 609|Homo sapiens sarcosine dehydrogenase... 74 4e-13
AY956763-1|AAX38250.1| 422|Homo sapiens heat shock protein 90Bb... 32 1.1
Z25535-1|CAA80982.1| 1475|Homo sapiens nuclear pore complex prot... 31 3.4
BC052965-1|AAH52965.1| 1475|Homo sapiens nucleoporin 153kDa prot... 31 3.4
AL157776-1|CAI16393.1| 1475|Homo sapiens nucleoporin 153kDa prot... 31 3.4
AL138824-2|CAI12246.1| 1475|Homo sapiens nucleoporin 153kDa prot... 31 3.4
AL138724-1|CAI40945.1| 1475|Homo sapiens nucleoporin 153kDa prot... 31 3.4
AB210024-1|BAE06106.1| 1455|Homo sapiens NUP153 variant protein ... 31 3.4
>BC033217-1|AAH33217.1| 611|Homo sapiens SARDH protein protein.
Length = 611
Score = 111 bits (268), Expect = 1e-24
Identities = 52/121 (42%), Positives = 73/121 (60%), Gaps = 1/121 (0%)
Frame = +3
Query: 102 RDILKGDATFGFSKHHDLIGKEALACRNGAALFNMSYYGKFYLTGPDAERTAKLAFTANI 281
R +L + TF F HHD I KE LACR AA+F+MSY+GKFYL G DA + A F+A++
Sbjct: 182 RRLLADEYTFAFPPHHDTIKKECLACRGAAAVFDMSYFGKFYLVGLDARKAADWLFSADV 241
Query: 282 TKNDDRVVYSLLLNEKGGVEADVTIS-ILDGGSGQLHEPIFKGRGYYVVTSGFSANHTLA 458
++ VY+ +LN +GG E+D+T+S + P F+G GYY+ G A H +
Sbjct: 242 SRPPGSTVYTCMLNHRGGTESDLTVSRLAPSHQASPLAPAFEGDGYYLAMGGAVAQHNWS 301
Query: 459 H 461
H
Sbjct: 302 H 302
>AL590710-3|CAI12276.1| 918|Homo sapiens sarcosine dehydrogenase
protein.
Length = 918
Score = 111 bits (268), Expect = 1e-24
Identities = 52/121 (42%), Positives = 73/121 (60%), Gaps = 1/121 (0%)
Frame = +3
Query: 102 RDILKGDATFGFSKHHDLIGKEALACRNGAALFNMSYYGKFYLTGPDAERTAKLAFTANI 281
R +L + TF F HHD I KE LACR AA+F+MSY+GKFYL G DA + A F+A++
Sbjct: 539 RRLLADEYTFAFPPHHDTIKKECLACRGAAAVFDMSYFGKFYLVGLDARKAADWLFSADV 598
Query: 282 TKNDDRVVYSLLLNEKGGVEADVTIS-ILDGGSGQLHEPIFKGRGYYVVTSGFSANHTLA 458
++ VY+ +LN +GG E+D+T+S + P F+G GYY+ G A H +
Sbjct: 599 SRPPGSTVYTCMLNHRGGTESDLTVSRLAPSHQASPLAPAFEGDGYYLAMGGAVAQHNWS 658
Query: 459 H 461
H
Sbjct: 659 H 659
>AL365494-4|CAI13356.1| 918|Homo sapiens sarcosine dehydrogenase
protein.
Length = 918
Score = 111 bits (268), Expect = 1e-24
Identities = 52/121 (42%), Positives = 73/121 (60%), Gaps = 1/121 (0%)
Frame = +3
Query: 102 RDILKGDATFGFSKHHDLIGKEALACRNGAALFNMSYYGKFYLTGPDAERTAKLAFTANI 281
R +L + TF F HHD I KE LACR AA+F+MSY+GKFYL G DA + A F+A++
Sbjct: 539 RRLLADEYTFAFPPHHDTIKKECLACRGAAAVFDMSYFGKFYLVGLDARKAADWLFSADV 598
Query: 282 TKNDDRVVYSLLLNEKGGVEADVTIS-ILDGGSGQLHEPIFKGRGYYVVTSGFSANHTLA 458
++ VY+ +LN +GG E+D+T+S + P F+G GYY+ G A H +
Sbjct: 599 SRPPGSTVYTCMLNHRGGTESDLTVSRLAPSHQASPLAPAFEGDGYYLAMGGAVAQHNWS 658
Query: 459 H 461
H
Sbjct: 659 H 659
>AK223402-1|BAD97122.1| 918|Homo sapiens sarcosine dehydrogenase
variant protein.
Length = 918
Score = 111 bits (268), Expect = 1e-24
Identities = 52/121 (42%), Positives = 73/121 (60%), Gaps = 1/121 (0%)
Frame = +3
Query: 102 RDILKGDATFGFSKHHDLIGKEALACRNGAALFNMSYYGKFYLTGPDAERTAKLAFTANI 281
R +L + TF F HHD I KE LACR AA+F+MSY+GKFYL G DA + A F+A++
Sbjct: 539 RRLLADEYTFAFPPHHDTIKKECLACRGAAAVFDMSYFGKFYLVGLDARKAADWLFSADV 598
Query: 282 TKNDDRVVYSLLLNEKGGVEADVTIS-ILDGGSGQLHEPIFKGRGYYVVTSGFSANHTLA 458
++ VY+ +LN +GG E+D+T+S + P F+G GYY+ G A H +
Sbjct: 599 SRPPGSTVYTCMLNHRGGTESDLTVSRLAPSHQASPLAPAFEGDGYYLAMGGAVAQHNWS 658
Query: 459 H 461
H
Sbjct: 659 H 659
>AF095735-1|AAD53398.2| 918|Homo sapiens sarcosine dehydrogenase
protein.
Length = 918
Score = 111 bits (268), Expect = 1e-24
Identities = 52/121 (42%), Positives = 73/121 (60%), Gaps = 1/121 (0%)
Frame = +3
Query: 102 RDILKGDATFGFSKHHDLIGKEALACRNGAALFNMSYYGKFYLTGPDAERTAKLAFTANI 281
R +L + TF F HHD I KE LACR AA+F+MSY+GKFYL G DA + A F+A++
Sbjct: 539 RRLLADEYTFAFPPHHDTIKKECLACRGAAAVFDMSYFGKFYLVGLDARKAADWLFSADV 598
Query: 282 TKNDDRVVYSLLLNEKGGVEADVTIS-ILDGGSGQLHEPIFKGRGYYVVTSGFSANHTLA 458
++ VY+ +LN +GG E+D+T+S + P F+G GYY+ G A H +
Sbjct: 599 SRPPGSTVYTCMLNHRGGTESDLTVSRLAPSHQASPLAPAFEGDGYYLAMGGAVAQHNWS 658
Query: 459 H 461
H
Sbjct: 659 H 659
>AF162428-1|AAD43585.1| 918|Homo sapiens sarcosine dehydrogenase
protein.
Length = 918
Score = 111 bits (266), Expect = 2e-24
Identities = 52/121 (42%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Frame = +3
Query: 102 RDILKGDATFGFSKHHDLIGKEALACRNGAALFNMSYYGKFYLTGPDAERTAKLAFTANI 281
R +L + TF F HHD I KE LACR AA+F+MSY+GKFYL G DA + A F+A++
Sbjct: 539 RRLLADEYTFAFPPHHDTIKKECLACRGAAAVFDMSYFGKFYLVGLDARKAADWLFSADV 598
Query: 282 TKNDDRVVYSLLLNEKGGVEADVTIS-ILDGGSGQLHEPIFKGRGYYVVTSGFSANHTLA 458
++ VY+ +LN GG E+D+T+S + P F+G GYY+ G A H +
Sbjct: 599 SRPPGSTVYTCMLNHXGGTESDLTVSRLAPSHQASPLAPAFEGDGYYLAXGGAVAQHNWS 658
Query: 459 H 461
H
Sbjct: 659 H 659
>AF140745-1|AAD32214.1| 918|Homo sapiens sarcosine dehydrogenase
protein.
Length = 918
Score = 111 bits (266), Expect = 2e-24
Identities = 52/121 (42%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Frame = +3
Query: 102 RDILKGDATFGFSKHHDLIGKEALACRNGAALFNMSYYGKFYLTGPDAERTAKLAFTANI 281
R +L + TF F HHD I KE LACR AA+F+MSY+GKFYL G DA + A F+A++
Sbjct: 539 RRLLADEYTFAFPPHHDTIKKECLACRGAAAVFDMSYFGKFYLVGLDARKAADWLFSADV 598
Query: 282 TKNDDRVVYSLLLNEKGGVEADVTIS-ILDGGSGQLHEPIFKGRGYYVVTSGFSANHTLA 458
++ VY+ +LN GG E+D+T+S + P F+G GYY+ G A H +
Sbjct: 599 SRPPGSTVYTCMLNHXGGTESDLTVSRLAPSHQASPLAPAFEGDGYYLAXGGAVAQHNWS 658
Query: 459 H 461
H
Sbjct: 659 H 659
>AF129265-1|AAD33412.1| 602|Homo sapiens unknown protein.
Length = 602
Score = 111 bits (266), Expect = 2e-24
Identities = 52/121 (42%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Frame = +3
Query: 102 RDILKGDATFGFSKHHDLIGKEALACRNGAALFNMSYYGKFYLTGPDAERTAKLAFTANI 281
R +L + TF F HHD I KE LACR AA+F+MSY+GKFYL G DA + A F+A++
Sbjct: 259 RRLLADEYTFAFPPHHDTIKKECLACRGAAAVFDMSYFGKFYLVGLDARKAADWLFSADV 318
Query: 282 TKNDDRVVYSLLLNEKGGVEADVTIS-ILDGGSGQLHEPIFKGRGYYVVTSGFSANHTLA 458
++ VY+ +LN GG E+D+T+S + P F+G GYY+ G A H +
Sbjct: 319 SRPPGSTVYTCMLNHHGGTESDLTVSRLAPSHQASPLAPAFEGDGYYLAVGGAVAQHNWS 378
Query: 459 H 461
H
Sbjct: 379 H 379
>AL590710-1|CAI12274.1| 368|Homo sapiens sarcosine dehydrogenase
protein.
Length = 368
Score = 74.5 bits (175), Expect = 2e-13
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = +3
Query: 204 MSYYGKFYLTGPDAERTAKLAFTANITKNDDRVVYSLLLNEKGGVEADVTIS-ILDGGSG 380
MSY+GKFYL G DA + A F+A++++ VY+ +LN +GG E+D+T+S +
Sbjct: 1 MSYFGKFYLVGLDARKAADWLFSADVSRPPGSTVYTCMLNHRGGTESDLTVSRLAPSHQA 60
Query: 381 QLHEPIFKGRGYYVVTSGFSANHTLAH 461
P F+G GYY+ G A H +H
Sbjct: 61 SPLAPAFEGDGYYLAMGGAVAQHNWSH 87
>AL365494-3|CAI13355.1| 368|Homo sapiens sarcosine dehydrogenase
protein.
Length = 368
Score = 74.5 bits (175), Expect = 2e-13
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = +3
Query: 204 MSYYGKFYLTGPDAERTAKLAFTANITKNDDRVVYSLLLNEKGGVEADVTIS-ILDGGSG 380
MSY+GKFYL G DA + A F+A++++ VY+ +LN +GG E+D+T+S +
Sbjct: 1 MSYFGKFYLVGLDARKAADWLFSADVSRPPGSTVYTCMLNHRGGTESDLTVSRLAPSHQA 60
Query: 381 QLHEPIFKGRGYYVVTSGFSANHTLAH 461
P F+G GYY+ G A H +H
Sbjct: 61 SPLAPAFEGDGYYLAMGGAVAQHNWSH 87
>AL590710-2|CAI12275.1| 609|Homo sapiens sarcosine dehydrogenase
protein.
Length = 609
Score = 73.7 bits (173), Expect = 4e-13
Identities = 32/62 (51%), Positives = 43/62 (69%)
Frame = +3
Query: 102 RDILKGDATFGFSKHHDLIGKEALACRNGAALFNMSYYGKFYLTGPDAERTAKLAFTANI 281
R +L + TF F HHD I KE LACR AA+F+MSY+GKFYL G DA + A F+A++
Sbjct: 539 RRLLADEYTFAFPPHHDTIKKECLACRGAAAVFDMSYFGKFYLVGLDARKAADWLFSADV 598
Query: 282 TK 287
++
Sbjct: 599 SR 600
>AY956763-1|AAX38250.1| 422|Homo sapiens heat shock protein 90Bb
protein.
Length = 422
Score = 32.3 bits (70), Expect = 1.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 222 FYLTGPDAERTAKLAFTANITKNDDRVVY 308
+Y+TG E+ A AF + K D RVVY
Sbjct: 301 YYITGESKEQVANSAFVEQVWKRDSRVVY 329
>Z25535-1|CAA80982.1| 1475|Homo sapiens nuclear pore complex protein
hnup153 protein.
Length = 1475
Score = 30.7 bits (66), Expect = 3.4
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -3
Query: 409 RPLKIGSCNWPLPPSRILIVTSASTPPFSFRSKEYTTLS 293
+PL+ P+ P L +TS+S P F+F S E TT S
Sbjct: 460 KPLEEEEMEVPVLPKISLPITSSSLPTFNFSSPEITTSS 498
>BC052965-1|AAH52965.1| 1475|Homo sapiens nucleoporin 153kDa
protein.
Length = 1475
Score = 30.7 bits (66), Expect = 3.4
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -3
Query: 409 RPLKIGSCNWPLPPSRILIVTSASTPPFSFRSKEYTTLS 293
+PL+ P+ P L +TS+S P F+F S E TT S
Sbjct: 460 KPLEEEEMEVPVLPKISLPITSSSLPTFNFSSPEITTSS 498
>AL157776-1|CAI16393.1| 1475|Homo sapiens nucleoporin 153kDa
protein.
Length = 1475
Score = 30.7 bits (66), Expect = 3.4
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -3
Query: 409 RPLKIGSCNWPLPPSRILIVTSASTPPFSFRSKEYTTLS 293
+PL+ P+ P L +TS+S P F+F S E TT S
Sbjct: 460 KPLEEEEMEVPVLPKISLPITSSSLPTFNFSSPEITTSS 498
>AL138824-2|CAI12246.1| 1475|Homo sapiens nucleoporin 153kDa
protein.
Length = 1475
Score = 30.7 bits (66), Expect = 3.4
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -3
Query: 409 RPLKIGSCNWPLPPSRILIVTSASTPPFSFRSKEYTTLS 293
+PL+ P+ P L +TS+S P F+F S E TT S
Sbjct: 460 KPLEEEEMEVPVLPKISLPITSSSLPTFNFSSPEITTSS 498
>AL138724-1|CAI40945.1| 1475|Homo sapiens nucleoporin 153kDa
protein.
Length = 1475
Score = 30.7 bits (66), Expect = 3.4
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -3
Query: 409 RPLKIGSCNWPLPPSRILIVTSASTPPFSFRSKEYTTLS 293
+PL+ P+ P L +TS+S P F+F S E TT S
Sbjct: 460 KPLEEEEMEVPVLPKISLPITSSSLPTFNFSSPEITTSS 498
>AB210024-1|BAE06106.1| 1455|Homo sapiens NUP153 variant protein
protein.
Length = 1455
Score = 30.7 bits (66), Expect = 3.4
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -3
Query: 409 RPLKIGSCNWPLPPSRILIVTSASTPPFSFRSKEYTTLS 293
+PL+ P+ P L +TS+S P F+F S E TT S
Sbjct: 482 KPLEEEEMEVPVLPKISLPITSSSLPTFNFSSPEITTSS 520
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,183,041
Number of Sequences: 237096
Number of extensions: 1487062
Number of successful extensions: 10437
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 10369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10427
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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