Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_D03
(540 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001625-1|AAN71380.1| 907|Drosophila melanogaster RE37361p pro... 126 2e-29
AY051545-1|AAK92969.1| 600|Drosophila melanogaster GH19226p pro... 126 2e-29
AE013599-2554|AAF57796.1| 894|Drosophila melanogaster CG6385-PA... 126 2e-29
BT004890-1|AAO47868.1| 824|Drosophila melanogaster RE52324p pro... 31 1.0
AY052142-1|AAK93566.1| 1367|Drosophila melanogaster SD09926p pro... 31 1.0
AF097636-1|AAF63187.1| 1368|Drosophila melanogaster bicoid-inter... 31 1.0
AE013599-166|AAM68350.1| 1367|Drosophila melanogaster CG8276-PB,... 31 1.0
AE013599-165|AAF57267.2| 1367|Drosophila melanogaster CG8276-PA,... 31 1.0
AY071730-1|AAL49352.1| 702|Drosophila melanogaster RH44902p pro... 28 9.4
AE014134-1888|AAF52952.2| 702|Drosophila melanogaster CG5337-PA... 28 9.4
>BT001625-1|AAN71380.1| 907|Drosophila melanogaster RE37361p
protein.
Length = 907
Score = 126 bits (304), Expect = 2e-29
Identities = 59/116 (50%), Positives = 79/116 (68%), Gaps = 1/116 (0%)
Frame = +3
Query: 108 ILKGDATFG-FSKHHDLIGKEALACRNGAALFNMSYYGKFYLTGPDAERTAKLAFTANIT 284
+L GD + FS++HDLIG EALACRN A +FNMSY+ K L GP A+ A F+AN
Sbjct: 523 VLDGDLHYSRFSEYHDLIGSEALACRNNAVVFNMSYFAKLLLDGPQAQEAADWLFSANTN 582
Query: 285 KNDDRVVYSLLLNEKGGVEADVTISILDGGSGQLHEPIFKGRGYYVVTSGFSANHT 452
++ + VY+ LN+ GGVEADVTIS L GSG+++ P G+G+Y+V G SA +T
Sbjct: 583 RDPSKTVYTCALNDAGGVEADVTISRLAPGSGEVYNPKINGQGFYIVAGGASAFYT 638
Score = 31.9 bits (69), Expect = 0.58
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 4 RGAFFMP--GEKIRVQQYDWGGTHDYPKNIDHRYEEI 108
R FF+P +K VQ YDW G++ + ++ D YE +
Sbjct: 487 RPGFFLPTGSKKAVVQPYDWYGSYVHQRHKDSEYERV 523
>AY051545-1|AAK92969.1| 600|Drosophila melanogaster GH19226p
protein.
Length = 600
Score = 126 bits (304), Expect = 2e-29
Identities = 59/116 (50%), Positives = 79/116 (68%), Gaps = 1/116 (0%)
Frame = +3
Query: 108 ILKGDATFG-FSKHHDLIGKEALACRNGAALFNMSYYGKFYLTGPDAERTAKLAFTANIT 284
+L GD + FS++HDLIG EALACRN A +FNMSY+ K L GP A+ A F+AN
Sbjct: 216 VLDGDLHYSRFSEYHDLIGSEALACRNNAVVFNMSYFAKLLLDGPQAQEAADWLFSANTN 275
Query: 285 KNDDRVVYSLLLNEKGGVEADVTISILDGGSGQLHEPIFKGRGYYVVTSGFSANHT 452
++ + VY+ LN+ GGVEADVTIS L GSG+++ P G+G+Y+V G SA +T
Sbjct: 276 RDPSKTVYTCALNDAGGVEADVTISRLAPGSGEVYNPKINGQGFYIVAGGASAFYT 331
Score = 31.9 bits (69), Expect = 0.58
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 4 RGAFFMP--GEKIRVQQYDWGGTHDYPKNIDHRYEEI 108
R FF+P +K VQ YDW G++ + ++ D YE +
Sbjct: 180 RPGFFLPTGSKKAVVQPYDWYGSYVHQRHKDSEYERV 216
>AE013599-2554|AAF57796.1| 894|Drosophila melanogaster CG6385-PA
protein.
Length = 894
Score = 126 bits (304), Expect = 2e-29
Identities = 59/116 (50%), Positives = 79/116 (68%), Gaps = 1/116 (0%)
Frame = +3
Query: 108 ILKGDATFG-FSKHHDLIGKEALACRNGAALFNMSYYGKFYLTGPDAERTAKLAFTANIT 284
+L GD + FS++HDLIG EALACRN A +FNMSY+ K L GP A+ A F+AN
Sbjct: 510 VLDGDLHYSRFSEYHDLIGSEALACRNNAVVFNMSYFAKLLLDGPQAQEAADWLFSANTN 569
Query: 285 KNDDRVVYSLLLNEKGGVEADVTISILDGGSGQLHEPIFKGRGYYVVTSGFSANHT 452
++ + VY+ LN+ GGVEADVTIS L GSG+++ P G+G+Y+V G SA +T
Sbjct: 570 RDPSKTVYTCALNDAGGVEADVTISRLAPGSGEVYNPKINGQGFYIVAGGASAFYT 625
Score = 31.9 bits (69), Expect = 0.58
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 4 RGAFFMP--GEKIRVQQYDWGGTHDYPKNIDHRYEEI 108
R FF+P +K VQ YDW G++ + ++ D YE +
Sbjct: 474 RPGFFLPTGSKKAVVQPYDWYGSYVHQRHKDSEYERV 510
>BT004890-1|AAO47868.1| 824|Drosophila melanogaster RE52324p
protein.
Length = 824
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/28 (39%), Positives = 21/28 (75%)
Frame = +3
Query: 369 GGSGQLHEPIFKGRGYYVVTSGFSANHT 452
GG+ Q+H+ + +G ++V+ +G +ANHT
Sbjct: 195 GGTIQMHKKMLRGHHHHVLCAGNNANHT 222
>AY052142-1|AAK93566.1| 1367|Drosophila melanogaster SD09926p
protein.
Length = 1367
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/28 (39%), Positives = 21/28 (75%)
Frame = +3
Query: 369 GGSGQLHEPIFKGRGYYVVTSGFSANHT 452
GG+ Q+H+ + +G ++V+ +G +ANHT
Sbjct: 195 GGTIQMHKKMLRGHHHHVLCAGNNANHT 222
>AF097636-1|AAF63187.1| 1368|Drosophila melanogaster
bicoid-interacting protein BIN3 protein.
Length = 1368
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/28 (39%), Positives = 21/28 (75%)
Frame = +3
Query: 369 GGSGQLHEPIFKGRGYYVVTSGFSANHT 452
GG+ Q+H+ + +G ++V+ +G +ANHT
Sbjct: 195 GGTIQMHKKMLRGHHHHVLCAGNNANHT 222
>AE013599-166|AAM68350.1| 1367|Drosophila melanogaster CG8276-PB,
isoform B protein.
Length = 1367
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/28 (39%), Positives = 21/28 (75%)
Frame = +3
Query: 369 GGSGQLHEPIFKGRGYYVVTSGFSANHT 452
GG+ Q+H+ + +G ++V+ +G +ANHT
Sbjct: 195 GGTIQMHKKMLRGHHHHVLCAGNNANHT 222
>AE013599-165|AAF57267.2| 1367|Drosophila melanogaster CG8276-PA,
isoform A protein.
Length = 1367
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/28 (39%), Positives = 21/28 (75%)
Frame = +3
Query: 369 GGSGQLHEPIFKGRGYYVVTSGFSANHT 452
GG+ Q+H+ + +G ++V+ +G +ANHT
Sbjct: 195 GGTIQMHKKMLRGHHHHVLCAGNNANHT 222
>AY071730-1|AAL49352.1| 702|Drosophila melanogaster RH44902p
protein.
Length = 702
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +3
Query: 213 YGKFYLTGPDAERTAKLAFTANITKNDDRVVYSLLLNEKGGVEADVTI 356
Y F + P+ +++ ++ K Y LLNEKG +E D+ +
Sbjct: 333 YRHFMVCRPEVKKSEMHPDEGDVKKITTNFFYGTLLNEKGQIEDDLLL 380
>AE014134-1888|AAF52952.2| 702|Drosophila melanogaster CG5337-PA
protein.
Length = 702
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +3
Query: 213 YGKFYLTGPDAERTAKLAFTANITKNDDRVVYSLLLNEKGGVEADVTI 356
Y F + P+ +++ ++ K Y LLNEKG +E D+ +
Sbjct: 333 YRHFMVCRPEVKKSEMHPDEGDVKKITTNFFYGTLLNEKGQIEDDLLL 380
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,267,685
Number of Sequences: 53049
Number of extensions: 457670
Number of successful extensions: 1025
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2053700352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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