Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_C24
(479 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 29 0.28
SPAC2C4.17c |||MS ion channel protein 2|Schizosaccharomyces pomb... 29 0.48
SPBC3D6.06c |||ribose-phosphate pyrophosphokinase |Schizosacchar... 27 1.5
SPAC821.11 |pro1||gamma-glutamyl phosphate reductase Pro1 |Schiz... 27 1.9
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 1.9
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 26 3.4
SPBPB2B2.06c |||phosphoprotein phosphatase |Schizosaccharomyces ... 26 3.4
SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase Cdc... 25 4.5
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 25 4.5
SPAC23C4.13 |bet1||SNARE Bet1|Schizosaccharomyces pombe|chr 1|||... 25 5.9
SPBC13E7.06 |msd1|mug172|spindle pole body protein Msd1|Schizosa... 25 5.9
SPAC17A2.14 ||SPAC17G6.01|CorA family magnesium ion transporter|... 25 5.9
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 29.5 bits (63), Expect = 0.28
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 370 KDEHLLTSHFFYDVKEKNDQIEELT 444
K +H L ++F D+KEK+D +E+LT
Sbjct: 1126 KKQHDLCANFVDDLKEKSDALEQLT 1150
Score = 27.1 bits (57), Expect = 1.5
Identities = 21/87 (24%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +1
Query: 181 TETQEVLKNEIKSLKEQCIDTCNVINNIPQVASTSNEDEAAERSL-SYVEGVKTEIQNAN 357
TE ++ +NE SL + +D N + ++ + + +ED RSL V ++ E + +
Sbjct: 1607 TEELQLAENERLSLTTRMLDLQNQVKDLSNIKDSLSEDLRTLRSLEDSVASLQKECKIKS 1666
Query: 358 AIILKDEHLLTSHFFYDVKEKNDQIEE 438
+ + +LTS V+ +N ++E+
Sbjct: 1667 NTVESLQDVLTS-----VQARNAELED 1688
>SPAC2C4.17c |||MS ion channel protein 2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 840
Score = 28.7 bits (61), Expect = 0.48
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -1
Query: 215 FISFFRTSWVSVLGSFDVMLIARRRPFSTVHRYLMKVI 102
FISF TS+ ++L +F L++ FST + LM I
Sbjct: 461 FISFLDTSFATILAAFGTTLLSLSFVFSTSAQELMSSI 498
>SPBC3D6.06c |||ribose-phosphate pyrophosphokinase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 341
Score = 27.1 bits (57), Expect = 1.5
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +1
Query: 211 IKSLKEQCIDTCNVINNIPQVASTSNEDEAAERSLSYVEGVKTEIQNANAIILKDEH 381
I+ +K CID V N PQ + S + + + ++ E ++ I N +I + +H
Sbjct: 281 IERVKLSCIDKLIVTNTAPQTITPSGCFDIIDVAPTFAEAIR-RIHNGESISILYDH 336
>SPAC821.11 |pro1||gamma-glutamyl phosphate reductase Pro1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 451
Score = 26.6 bits (56), Expect = 1.9
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +1
Query: 217 SLKEQCIDTCNVINNIPQVASTSNEDEAAERSLSYVEGVKTEIQNANAIILKDEHLL 387
SL+E + N N I Q S + D+A ++ + + K+E+ ANA +K LL
Sbjct: 2 SLEENVKEAKNAFN-ILQTLSVEDRDDALDKIVEELRIKKSEVLAANAEDMKAAKLL 57
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.6 bits (56), Expect = 1.9
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Frame = +1
Query: 172 EPNTETQEVLKNEIKSLKEQCIDTCNVINNIPQVASTSNEDEAAERSLSYV----EGVKT 339
E + + +N +K + C +I+ S + + EAA+R + Y+ + V T
Sbjct: 104 ETSPHVYAIAENAYYQMKSYHENQCIIISG----ESGAGKTEAAKRIMQYITHVSKSVGT 159
Query: 340 EIQNANAIILKDEHLLTS 393
EI+ + IIL LL S
Sbjct: 160 EIERVSEIILATNPLLES 177
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 25.8 bits (54), Expect = 3.4
Identities = 19/89 (21%), Positives = 39/89 (43%)
Frame = +1
Query: 160 MTSNEPNTETQEVLKNEIKSLKEQCIDTCNVINNIPQVASTSNEDEAAERSLSYVEGVKT 339
M + + NT + +I S++ + T N N P +T+ ED +++ Y++ + +
Sbjct: 3116 MAAWKSNTTDENKRNEDILSIQSNFLST-NQSTNAP---ATNKEDGLSKKVWEYIDEIMS 3171
Query: 340 EIQNANAIILKDEHLLTSHFFYDVKEKND 426
++ A ++ L K KND
Sbjct: 3172 ILKTAYPLLALTMETLVDQIQAKFKCKND 3200
>SPBPB2B2.06c |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 601
Score = 25.8 bits (54), Expect = 3.4
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 288 IRSGSNLRNVVNNIASIN 235
+ GSNLRN+ N+A++N
Sbjct: 479 LNGGSNLRNINENLAALN 496
>SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase
Cdc7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1062
Score = 25.4 bits (53), Expect = 4.5
Identities = 21/102 (20%), Positives = 42/102 (41%)
Frame = +1
Query: 157 NMTSNEPNTETQEVLKNEIKSLKEQCIDTCNVINNIPQVASTSNEDEAAERSLSYVEGVK 336
N + + T +L + + SL+++ I + + + Q+AS +ED + +R + G+
Sbjct: 508 NNIALDKRTHLASLLSSLLGSLRDKNIGSKDT--TVSQIASILSEDLSLKREIIQAHGIL 565
Query: 337 TEIQNANAIILKDEHLLTSHFFYDVKEKNDQIEELTAFTRGL 462
++ I D LL V + + F GL
Sbjct: 566 PLLETLREIKTPDVQLLLLKLINTVAFDDHTTLQKVCFAGGL 607
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 25.4 bits (53), Expect = 4.5
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = +1
Query: 181 TETQEVLKNEIKSLKEQCIDTCNVINNIPQVASTSNEDEAAERSLSYVEGVKTEIQNANA 360
TE E+++ +K + I + + I +S N EA+E L V E+
Sbjct: 599 TEAAEIMRKRRNKVKPKGIKSEVASDKITD-SSPGNMSEASESELEEVFKNPKELSKKKT 657
Query: 361 IILKDEHLLTSHF 399
KD+ SH+
Sbjct: 658 TDFKDKEYYMSHY 670
>SPAC23C4.13 |bet1||SNARE Bet1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 117
Score = 25.0 bits (52), Expect = 5.9
Identities = 17/68 (25%), Positives = 34/68 (50%)
Frame = +1
Query: 154 INMTSNEPNTETQEVLKNEIKSLKEQCIDTCNVINNIPQVASTSNEDEAAERSLSYVEGV 333
++ NE N E L ++KSLKE ++ I + ++ + N+ + +SL + G
Sbjct: 27 LDSLENE-NDERISKLTGKVKSLKELTMNIGTEITSSTKLMESMNDSFDSTKSL--LSGT 83
Query: 334 KTEIQNAN 357
T ++N +
Sbjct: 84 MTRLKNVS 91
>SPBC13E7.06 |msd1|mug172|spindle pole body protein
Msd1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 331
Score = 25.0 bits (52), Expect = 5.9
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +1
Query: 196 VLKNEIKSLKEQCIDTCNVINNIPQVASTSNEDEAAERS-LSYVEGVKTEIQNANAII-- 366
V++ E L D CN++N I ++ ++E+ + S L ++ + E Q N I
Sbjct: 29 VIQAEKLRLSHDIRDNCNIVNIIYRLLRATDEERLEKESLLDAIKNNEYEKQRDNNTIKR 88
Query: 367 LKDE 378
LK+E
Sbjct: 89 LKNE 92
>SPAC17A2.14 ||SPAC17G6.01|CorA family magnesium ion
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 617
Score = 25.0 bits (52), Expect = 5.9
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -1
Query: 71 RTINWVSFRY*NKIPSTAQYL 9
RT +V+FR N++PS ++YL
Sbjct: 348 RTYYFVTFRSFNQLPSNSEYL 368
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,876,007
Number of Sequences: 5004
Number of extensions: 35992
Number of successful extensions: 119
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 119
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 184020746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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