Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_C24
         (479 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051766-1|AAK93190.1|  379|Drosophila melanogaster LD29322p pro...    30   1.4  
AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein ...    30   1.4  
AE014297-1046|AAF54455.1|  379|Drosophila melanogaster CG8507-PA...    30   1.4  
AY119617-1|AAM50271.1|  462|Drosophila melanogaster LD44530p pro...    28   7.6  
AY058322-1|AAL13551.1|  684|Drosophila melanogaster GH09291p pro...    28   7.6  
AE013599-3861|AAM68311.1| 1300|Drosophila melanogaster CG4527-PA...    28   7.6  

>AY051766-1|AAK93190.1|  379|Drosophila melanogaster LD29322p
           protein.
          Length = 379

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 14/58 (24%), Positives = 30/58 (51%)
 Frame = +1

Query: 265 PQVASTSNEDEAAERSLSYVEGVKTEIQNANAIILKDEHLLTSHFFYDVKEKNDQIEE 438
           P+V       +A+  ++  +E +KTE+ +  + +LK  HL   H     K K +++++
Sbjct: 286 PKVQGLWRVAQASNFTVKELESIKTELHHFESRLLKLRHLHAEHALQKEKYKGEKVKD 343


>AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein
           protein.
          Length = 1006

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 14/51 (27%), Positives = 23/51 (45%)
 Frame = +1

Query: 199 LKNEIKSLKEQCIDTCNVINNIPQVASTSNEDEAAERSLSYVEGVKTEIQN 351
           L  E + L+ +  D     NN+     TS+ D    +   Y  G+ TE++N
Sbjct: 122 LLKEFQDLQYKKGDQLTFTNNVKHTIRTSHNDPVYRKPYGYAPGLDTEVEN 172


>AE014297-1046|AAF54455.1|  379|Drosophila melanogaster CG8507-PA
           protein.
          Length = 379

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 14/58 (24%), Positives = 30/58 (51%)
 Frame = +1

Query: 265 PQVASTSNEDEAAERSLSYVEGVKTEIQNANAIILKDEHLLTSHFFYDVKEKNDQIEE 438
           P+V       +A+  ++  +E +KTE+ +  + +LK  HL   H     K K +++++
Sbjct: 286 PKVQGLWRVAQASNFTVKELESIKTELHHFESRLLKLRHLHAEHALQKEKYKGEKVKD 343


>AY119617-1|AAM50271.1|  462|Drosophila melanogaster LD44530p
           protein.
          Length = 462

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +1

Query: 112 IKYL*TVEKGRRRAINMTSNEPNTETQEVLKNEIKSLKEQCIDTCNVINNIP 267
           IK L  ++  +RRA+    +   +E  E LK E++  +EQ +    V   IP
Sbjct: 410 IKELEQLQNEKRRALVEHEHSKLSEIDERLKGELREWREQLVPRKQVCMQIP 461


>AY058322-1|AAL13551.1|  684|Drosophila melanogaster GH09291p
           protein.
          Length = 684

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +1

Query: 112 IKYL*TVEKGRRRAINMTSNEPNTETQEVLKNEIKSLKEQCIDTCNVINNIP 267
           IK L  ++  +RRA+    +   +E  E LK E++  +EQ +    V   IP
Sbjct: 632 IKELEQLQNEKRRALVEHEHSKLSEIDERLKGELREWREQLVPRKQVCMQIP 683


>AE013599-3861|AAM68311.1| 1300|Drosophila melanogaster CG4527-PA,
            isoform A protein.
          Length = 1300

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +1

Query: 112  IKYL*TVEKGRRRAINMTSNEPNTETQEVLKNEIKSLKEQCIDTCNVINNIP 267
            IK L  ++  +RRA+    +   +E  E LK E++  +EQ +    V   IP
Sbjct: 1248 IKELEQLQNEKRRALVEHEHSKLSEIDERLKGELREWREQLVPRKQVCMQIP 1299


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,602,243
Number of Sequences: 53049
Number of extensions: 381945
Number of successful extensions: 898
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1663799760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)