Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_C24
(479 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 32 0.25
AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory cy... 30 1.00
AY028167-1|AAK19023.1| 287|Caenorhabditis elegans EFL-2 protein. 30 1.00
AL117203-19|CAN86631.1| 358|Caenorhabditis elegans Hypothetical... 30 1.00
AL117203-18|CAN86630.1| 332|Caenorhabditis elegans Hypothetical... 30 1.00
AL117203-17|CAN86629.1| 284|Caenorhabditis elegans Hypothetical... 30 1.00
AL117203-16|CAB60421.1| 412|Caenorhabditis elegans Hypothetical... 30 1.00
AF024497-4|AAO21479.1| 807|Caenorhabditis elegans Defective in ... 30 1.00
AF024497-3|AAO21478.1| 1036|Caenorhabditis elegans Defective in ... 30 1.00
AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in ... 30 1.00
Z71266-4|CAA95843.1| 478|Caenorhabditis elegans Hypothetical pr... 29 1.3
U40934-6|AAA81684.2| 43|Caenorhabditis elegans Hypothetical pr... 29 1.3
U41272-9|AAA82452.4| 1256|Caenorhabditis elegans Prion-like-(q/n... 28 3.1
Z71266-5|CAD56593.1| 370|Caenorhabditis elegans Hypothetical pr... 28 4.0
AF099914-7|AAC68762.1| 220|Caenorhabditis elegans Hypothetical ... 28 4.0
Z82055-10|CAB04848.2| 659|Caenorhabditis elegans Hypothetical p... 27 5.3
Z74030-16|CAI79165.1| 481|Caenorhabditis elegans Hypothetical p... 27 5.3
Z74030-7|CAA98447.2| 559|Caenorhabditis elegans Hypothetical pr... 27 5.3
Z74030-6|CAA98444.2| 508|Caenorhabditis elegans Hypothetical pr... 27 5.3
U64608-2|AAB04591.1| 537|Caenorhabditis elegans Hypothetical pr... 27 5.3
U56965-8|AAB52663.1| 314|Caenorhabditis elegans Hypothetical pr... 27 5.3
Z81113-7|CAI79236.1| 351|Caenorhabditis elegans Hypothetical pr... 27 7.0
EU068466-1|ABU49431.1| 801|Caenorhabditis elegans PRO-3 protein. 27 7.0
AL132948-40|CAD31812.3| 801|Caenorhabditis elegans Hypothetical... 27 7.0
Z35603-2|CAA84674.1| 418|Caenorhabditis elegans Hypothetical pr... 27 9.3
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 31.9 bits (69), Expect = 0.25
Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Frame = +1
Query: 181 TETQEVLKNEIKSLKEQCIDTCNVINNIPQVASTSNEDEAAERSLSYVEGVK----TEIQ 348
TET L++++ ++ + DT + AS N+D+A ++ + +E VK EI
Sbjct: 1570 TETISALQSKLYDVQSELEDTKQKLVEAENSASGWNDDDAWNKNENEIEEVKKALEIEIS 1629
Query: 349 NANAIILKDEHLLTS 393
N N I+K ++L+++
Sbjct: 1630 NRNDTIVKLQNLVSN 1644
>AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory
cytoplasmic polyA polymeraseprotein.
Length = 1113
Score = 29.9 bits (64), Expect = 1.00
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +1
Query: 127 TVEKGRRRAINMTSNEPNTETQEVLKNEIKSLKEQCIDTCNVINNIPQVASTSNEDEA 300
T+++ RRR S EP T+E NE+ + +C+ I+++ + +S S DE+
Sbjct: 457 TIDENRRRIHK--SQEPRIGTEEKALNELPRKANRRNSSCSSISSVSESSSPSALDES 512
>AY028167-1|AAK19023.1| 287|Caenorhabditis elegans EFL-2 protein.
Length = 287
Score = 29.9 bits (64), Expect = 1.00
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Frame = +1
Query: 103 ITFIKYL*TVEKGRRRAINMTSNEPNTETQEVLKNEIKSLKEQCIDTCNVINNIPQVAST 282
I ++ L VEK + I + N+E Q L+ ++ L++Q +I + +
Sbjct: 81 INVLEGLGYVEKVEKNNIRWIGDNNNSEEQNALEARVEMLRQQEKLLELMIRDAQAIIEL 140
Query: 283 SNEDEAAERSLSYV--EGV-KTEIQNANAIILKDEHLLTSHFFYDVKE 417
ED ER +YV E + KT N +II+K E +S F V +
Sbjct: 141 HFED-PIERPYNYVSKEDIRKTAEPNTKSIIVKSELDTSSSFEIQVTD 187
>AL117203-19|CAN86631.1| 358|Caenorhabditis elegans Hypothetical
protein Y48C3A.17d protein.
Length = 358
Score = 29.9 bits (64), Expect = 1.00
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Frame = +1
Query: 103 ITFIKYL*TVEKGRRRAINMTSNEPNTETQEVLKNEIKSLKEQCIDTCNVINNIPQVAST 282
I ++ L VEK + I + N+E Q L+ ++ L++Q +I + +
Sbjct: 78 INVLEGLGYVEKVEKNNIRWIGDNNNSEEQNALEARVEMLRQQEKLLELMIRDAQAIIEL 137
Query: 283 SNEDEAAERSLSYV--EGV-KTEIQNANAIILKDEHLLTSHFFYDVKE 417
ED ER +YV E + KT N +II+K E +S F V +
Sbjct: 138 HFED-PIERPYNYVSKEDIRKTAEPNTKSIIVKSELDTSSSFEIQVTD 184
>AL117203-18|CAN86630.1| 332|Caenorhabditis elegans Hypothetical
protein Y48C3A.17c protein.
Length = 332
Score = 29.9 bits (64), Expect = 1.00
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Frame = +1
Query: 103 ITFIKYL*TVEKGRRRAINMTSNEPNTETQEVLKNEIKSLKEQCIDTCNVINNIPQVAST 282
I ++ L VEK + I + N+E Q L+ ++ L++Q +I + +
Sbjct: 78 INVLEGLGYVEKVEKNNIRWIGDNNNSEEQNALEARVEMLRQQEKLLELMIRDAQAIIEL 137
Query: 283 SNEDEAAERSLSYV--EGV-KTEIQNANAIILKDEHLLTSHFFYDVKE 417
ED ER +YV E + KT N +II+K E +S F V +
Sbjct: 138 HFED-PIERPYNYVSKEDIRKTAEPNTKSIIVKSELDTSSSFEIQVTD 184
>AL117203-17|CAN86629.1| 284|Caenorhabditis elegans Hypothetical
protein Y48C3A.17b protein.
Length = 284
Score = 29.9 bits (64), Expect = 1.00
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Frame = +1
Query: 103 ITFIKYL*TVEKGRRRAINMTSNEPNTETQEVLKNEIKSLKEQCIDTCNVINNIPQVAST 282
I ++ L VEK + I + N+E Q L+ ++ L++Q +I + +
Sbjct: 78 INVLEGLGYVEKVEKNNIRWIGDNNNSEEQNALEARVEMLRQQEKLLELMIRDAQAIIEL 137
Query: 283 SNEDEAAERSLSYV--EGV-KTEIQNANAIILKDEHLLTSHFFYDVKE 417
ED ER +YV E + KT N +II+K E +S F V +
Sbjct: 138 HFED-PIERPYNYVSKEDIRKTAEPNTKSIIVKSELDTSSSFEIQVTD 184
>AL117203-16|CAB60421.1| 412|Caenorhabditis elegans Hypothetical
protein Y48C3A.17a protein.
Length = 412
Score = 29.9 bits (64), Expect = 1.00
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Frame = +1
Query: 103 ITFIKYL*TVEKGRRRAINMTSNEPNTETQEVLKNEIKSLKEQCIDTCNVINNIPQVAST 282
I ++ L VEK + I + N+E Q L+ ++ L++Q +I + +
Sbjct: 78 INVLEGLGYVEKVEKNNIRWIGDNNNSEEQNALEARVEMLRQQEKLLELMIRDAQAIIEL 137
Query: 283 SNEDEAAERSLSYV--EGV-KTEIQNANAIILKDEHLLTSHFFYDVKE 417
ED ER +YV E + KT N +II+K E +S F V +
Sbjct: 138 HFED-PIERPYNYVSKEDIRKTAEPNTKSIIVKSELDTSSSFEIQVTD 184
>AF024497-4|AAO21479.1| 807|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform d protein.
Length = 807
Score = 29.9 bits (64), Expect = 1.00
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +1
Query: 127 TVEKGRRRAINMTSNEPNTETQEVLKNEIKSLKEQCIDTCNVINNIPQVASTSNEDEA 300
T+++ RRR S EP T+E NE+ + +C+ I+++ + +S S DE+
Sbjct: 151 TIDENRRRIHK--SQEPRIGTEEKALNELPRKANRRNSSCSSISSVSESSSPSALDES 206
>AF024497-3|AAO21478.1| 1036|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform c protein.
Length = 1036
Score = 29.9 bits (64), Expect = 1.00
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +1
Query: 127 TVEKGRRRAINMTSNEPNTETQEVLKNEIKSLKEQCIDTCNVINNIPQVASTSNEDEA 300
T+++ RRR S EP T+E NE+ + +C+ I+++ + +S S DE+
Sbjct: 380 TIDENRRRIHK--SQEPRIGTEEKALNELPRKANRRNSSCSSISSVSESSSPSALDES 435
>AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform a protein.
Length = 1113
Score = 29.9 bits (64), Expect = 1.00
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +1
Query: 127 TVEKGRRRAINMTSNEPNTETQEVLKNEIKSLKEQCIDTCNVINNIPQVASTSNEDEA 300
T+++ RRR S EP T+E NE+ + +C+ I+++ + +S S DE+
Sbjct: 457 TIDENRRRIHK--SQEPRIGTEEKALNELPRKANRRNSSCSSISSVSESSSPSALDES 512
>Z71266-4|CAA95843.1| 478|Caenorhabditis elegans Hypothetical
protein R06C7.5a protein.
Length = 478
Score = 29.5 bits (63), Expect = 1.3
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +1
Query: 202 KNEIKSLKEQCIDTCNVINNIPQVASTSNEDEAAERSLSYVEGVKTEIQNANAIILKDEH 381
KN +KS E+C + N PQ A T D+ ER+L G + I + ++L E
Sbjct: 292 KNPMKS--ERCCALSRKLINAPQEALTILADQGLERTLDDSAGRRMLIPD---VLLTAEA 346
Query: 382 LLTS--HFFYDVKEKNDQIEEL 441
LLT+ + F + + D ++++
Sbjct: 347 LLTTLQNIFEGLSVQTDNVKKI 368
>U40934-6|AAA81684.2| 43|Caenorhabditis elegans Hypothetical
protein F35H10.3 protein.
Length = 43
Score = 29.5 bits (63), Expect = 1.3
Identities = 9/25 (36%), Positives = 19/25 (76%)
Frame = +1
Query: 187 TQEVLKNEIKSLKEQCIDTCNVINN 261
+ ++ K E++ +K+Q +DTCN +N+
Sbjct: 18 SDQLTKEELEMVKQQIMDTCNALNS 42
>U41272-9|AAA82452.4| 1256|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 62
protein.
Length = 1256
Score = 28.3 bits (60), Expect = 3.1
Identities = 16/82 (19%), Positives = 32/82 (39%)
Frame = +1
Query: 151 AINMTSNEPNTETQEVLKNEIKSLKEQCIDTCNVINNIPQVASTSNEDEAAERSLSYVEG 330
++NM SN ++ + +KN I C N + + + +N L ++
Sbjct: 280 SLNMRSNSISSSSSSPIKNSILPSTSPCTIPMNANSTTQLLMALNNNSPITSEQLQEIQN 339
Query: 331 VKTEIQNANAIILKDEHLLTSH 396
+ T + I+L E L +
Sbjct: 340 MTTISADGTEILLMQEPRLKQY 361
>Z71266-5|CAD56593.1| 370|Caenorhabditis elegans Hypothetical
protein R06C7.5b protein.
Length = 370
Score = 27.9 bits (59), Expect = 4.0
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = +1
Query: 202 KNEIKSLKEQCIDTCNVINNIPQVASTSNEDEAAERSLSYVEGVKTEIQNANAIILKDEH 381
KN +KS E+C + N PQ A T D+ ER+L G + I + ++L E
Sbjct: 292 KNPMKS--ERCCALSRKLINAPQEALTILADQGLERTLDDSAGRRMLIPD---VLLTAEA 346
Query: 382 LLTS 393
LLT+
Sbjct: 347 LLTT 350
>AF099914-7|AAC68762.1| 220|Caenorhabditis elegans Hypothetical
protein C40A11.7 protein.
Length = 220
Score = 27.9 bits (59), Expect = 4.0
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +1
Query: 115 KYL*TVEKGRRRAINMTSNEPNTETQEVLKNEIKSLKEQCIDTCNVINNIPQVASTSNE 291
KY TV R + + + E QE+ K L EQ +D C INN + +S+E
Sbjct: 56 KYFETVLNYMRSGVTVLPDSEK-ELQELKKEAEFYLLEQLVDLCEPINNQIRTYRSSHE 113
>Z82055-10|CAB04848.2| 659|Caenorhabditis elegans Hypothetical
protein T26H2.7 protein.
Length = 659
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 435 FYLVVFFLYIIEEMASK*MLILQYNGICILNFSF 334
FYL++ FLY+I +K + L Y + L FSF
Sbjct: 149 FYLLIPFLYLIGRNFNKNLQFLYYLTLGFLAFSF 182
>Z74030-16|CAI79165.1| 481|Caenorhabditis elegans Hypothetical
protein D1054.9e protein.
Length = 481
Score = 27.5 bits (58), Expect = 5.3
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +1
Query: 157 NMTSNEPNTETQEVLKNEIKSLKEQCIDTCNVINNI 264
N+ +NEPNTE +K+ + K +D + ++
Sbjct: 391 NLLTNEPNTELLAAIKDVVAKFKVASLDEAGIDQDV 426
>Z74030-7|CAA98447.2| 559|Caenorhabditis elegans Hypothetical
protein D1054.9b protein.
Length = 559
Score = 27.5 bits (58), Expect = 5.3
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +1
Query: 157 NMTSNEPNTETQEVLKNEIKSLKEQCIDTCNVINNI 264
N+ +NEPNTE +K+ + K +D + ++
Sbjct: 418 NLLTNEPNTELLAAIKDVVAKFKVASLDEAGIDQDV 453
>Z74030-6|CAA98444.2| 508|Caenorhabditis elegans Hypothetical
protein D1054.9a protein.
Length = 508
Score = 27.5 bits (58), Expect = 5.3
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +1
Query: 157 NMTSNEPNTETQEVLKNEIKSLKEQCIDTCNVINNI 264
N+ +NEPNTE +K+ + K +D + ++
Sbjct: 418 NLLTNEPNTELLAAIKDVVAKFKVASLDEAGIDQDV 453
>U64608-2|AAB04591.1| 537|Caenorhabditis elegans Hypothetical
protein T22B7.4 protein.
Length = 537
Score = 27.5 bits (58), Expect = 5.3
Identities = 22/83 (26%), Positives = 36/83 (43%)
Frame = +1
Query: 208 EIKSLKEQCIDTCNVINNIPQVASTSNEDEAAERSLSYVEGVKTEIQNANAIILKDEHLL 387
EI LK C+ N+ N + + + R Y E V ++ N IL +
Sbjct: 118 EIMKLKHGCLPIINMEKNPEPYGAGALPLQKNTRLEKYDE-VAAFVEETNTWILAEVKGS 176
Query: 388 TSHFFYDVKEKNDQIEELTAFTR 456
S+ Y+ + +DQ ++L FTR
Sbjct: 177 ISNHRYECIDVDDQEKKLLVFTR 199
>U56965-8|AAB52663.1| 314|Caenorhabditis elegans Hypothetical
protein C15H9.3 protein.
Length = 314
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = -3
Query: 432 YLVVFFLYIIEEMASK*MLILQYNGICILNFSFHTLDIRKGSFGCFIFIRSGSNLRNVVN 253
+++V +++ + + + N +C+ F I +GS C ++ SGS LRN +
Sbjct: 249 FIIVSMFLLVQTLIYNICTLYEDNNLCL--FLLFIAPIFRGS-KCLAYMVSGSALRNAIV 305
Query: 252 NI 247
N+
Sbjct: 306 NL 307
>Z81113-7|CAI79236.1| 351|Caenorhabditis elegans Hypothetical
protein T03F6.7 protein.
Length = 351
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 139 GRRRAINMTSNEPNTETQEVLKNEIKSLKEQC 234
G+R +N+T NE +TE + V K + + + C
Sbjct: 99 GKRNGLNITKNEGSTEMRSV-KGDYRKAADDC 129
>EU068466-1|ABU49431.1| 801|Caenorhabditis elegans PRO-3 protein.
Length = 801
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 412 KEKNDQIEELTAFTRGLVHDF 474
+EK+D+ EE F R VHDF
Sbjct: 502 QEKDDEDEEYNGFARPKVHDF 522
>AL132948-40|CAD31812.3| 801|Caenorhabditis elegans Hypothetical
protein Y39B6A.14 protein.
Length = 801
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 412 KEKNDQIEELTAFTRGLVHDF 474
+EK+D+ EE F R VHDF
Sbjct: 502 QEKDDEDEEYNGFARPKVHDF 522
>Z35603-2|CAA84674.1| 418|Caenorhabditis elegans Hypothetical
protein T02C12.2 protein.
Length = 418
Score = 26.6 bits (56), Expect = 9.3
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +1
Query: 181 TETQEVLKNEIKSLKEQCIDTCNVINNIPQVASTSNEDEAAERSLSYVEGVKTEIQNANA 360
T +E+L E++ L E ID +++ +E E + SLSY++GV TE ++ A
Sbjct: 21 TVKEEML--EVRELGEVIID--RTMDDFDSKTEKEHEMEMWKNSLSYIQGV-TEEESLEA 75
Query: 361 I 363
I
Sbjct: 76 I 76
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,429,674
Number of Sequences: 27780
Number of extensions: 204015
Number of successful extensions: 624
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 624
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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