Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_C23
         (473 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   5.4  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   7.2  
U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    22   9.5  
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    22   9.5  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +2

Query: 125 SNVETINNQMLYG 163
           SNVET++N+  YG
Sbjct: 826 SNVETVSNRTFYG 838


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 59  NIIHFYN*TFLVIISLIYMHLKSN 130
           NI   YN TF+ +  L  +HL++N
Sbjct: 862 NIEAIYNTTFIGLRRLTILHLENN 885


>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +1

Query: 409 TRTVKKYLTNKDIR 450
           +RTVK YL N+D++
Sbjct: 171 SRTVKCYLANQDVQ 184


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +1

Query: 409 TRTVKKYLTNKDIR 450
           +RTVK YL N+D++
Sbjct: 243 SRTVKCYLANQDVQ 256


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 395,077
Number of Sequences: 2352
Number of extensions: 6655
Number of successful extensions: 54
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41670678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)