Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_C20
(512 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein. 136 3e-32
X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein. 136 3e-32
BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor, argini... 136 3e-32
BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor, argini... 136 3e-32
BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein. 136 3e-32
BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein. 136 3e-32
AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor, argini... 136 3e-32
M90104-1|AAA60306.1| 221|Homo sapiens splicing factor protein. 133 3e-31
AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens ... 133 4e-31
BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein. 115 1e-25
AF031165-1|AAK54350.1| 282|Homo sapiens SRp46 splicing factor p... 115 1e-25
BC066958-1|AAH66958.1| 179|Homo sapiens SFRS2 protein protein. 108 1e-23
AK093626-1|BAC04206.1| 186|Homo sapiens protein ( Homo sapiens ... 108 1e-23
AF031166-1|AAK54351.1| 272|Homo sapiens SRp46 splicing factor p... 99 8e-21
L03693-1|AAA60162.1| 34|Homo sapiens splicing factor protein. 64 2e-10
BC021715-1|AAH21715.1| 261|Homo sapiens serine-arginine repress... 58 2e-08
AF449428-1|AAL57515.1| 261|Homo sapiens SRrp35 protein. 58 2e-08
BC010074-1|AAH10074.1| 173|Homo sapiens FUSIP1 protein protein. 56 6e-08
BC005039-1|AAH05039.1| 262|Homo sapiens FUS interacting protein... 56 6e-08
BC001107-1|AAH01107.1| 183|Homo sapiens FUS interacting protein... 56 6e-08
AY150181-1|AAN65381.1| 183|Homo sapiens splicing factor SRp38-2... 56 6e-08
AY150180-1|AAN65380.1| 262|Homo sapiens splicing factor SRp38 p... 56 6e-08
AY048592-2|AAL06099.1| 262|Homo sapiens TLS-associated SR prote... 56 6e-08
AY048592-1|AAL06098.1| 183|Homo sapiens TLS-associated SR prote... 56 6e-08
AL590609-10|CAI14808.1| 262|Homo sapiens FUS interacting protei... 56 6e-08
AL590609-9|CAI14807.1| 261|Homo sapiens FUS interacting protein... 56 6e-08
AL590609-8|CAI14805.1| 173|Homo sapiens FUS interacting protein... 56 6e-08
AL590609-7|CAI14806.1| 172|Homo sapiens FUS interacting protein... 56 6e-08
AL590609-6|CAI14803.1| 183|Homo sapiens FUS interacting protein... 56 6e-08
AL590609-5|CAI14804.1| 182|Homo sapiens FUS interacting protein... 56 6e-08
AK222994-1|BAD96714.1| 262|Homo sapiens FUS interacting protein... 56 6e-08
AK001286-1|BAA91601.1| 183|Homo sapiens protein ( Homo sapiens ... 56 6e-08
AF449427-1|AAL57514.1| 262|Homo sapiens SRrp40 protein. 56 6e-08
AF419332-1|AAL16666.1| 261|Homo sapiens TLS-associated protein ... 56 6e-08
AF419331-1|AAL16665.1| 183|Homo sapiens TLS-associated protein ... 56 6e-08
AF067730-1|AAC26727.1| 262|Homo sapiens TLS-associated protein ... 56 6e-08
AF047448-1|AAC70918.1| 183|Homo sapiens TLS-associated protein ... 56 6e-08
AL353135-4|CAI16247.1| 262|Homo sapiens RP11-63L7.3 protein. 53 5e-07
D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein. 48 3e-05
BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA bind... 48 3e-05
BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA bind... 48 3e-05
BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA bind... 48 3e-05
AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RN... 48 3e-05
AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein. 48 3e-05
CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein. 44 4e-04
BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein. 44 4e-04
AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1... 44 4e-04
AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1... 44 4e-04
AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens ... 44 4e-04
AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 b... 44 4e-04
AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1 a... 44 4e-04
BC071575-1|AAH71575.1| 69|Homo sapiens FUSIP1 protein protein. 41 0.002
U29943-1|AAA70417.1| 346|Homo sapiens Hel-N2 protein. 39 0.009
U12431-1|AAA69698.1| 359|Homo sapiens ELAV-like neuronal protei... 39 0.009
BC030692-1|AAH30692.1| 346|Homo sapiens ELAVL2 protein protein. 39 0.009
AL161628-4|CAI13378.1| 387|Homo sapiens ELAV (embryonic lethal,... 39 0.009
AL161628-3|CAI13377.1| 189|Homo sapiens ELAV (embryonic lethal,... 39 0.009
AL161628-2|CAC22160.1| 359|Homo sapiens ELAV (embryonic lethal,... 39 0.009
AL161628-1|CAI13376.1| 346|Homo sapiens ELAV (embryonic lethal,... 39 0.009
AB209294-1|BAD92531.1| 367|Homo sapiens ELAV (embryonic lethal,... 39 0.009
U38175-1|AAB41913.1| 326|Homo sapiens HuR RNA binding protein p... 39 0.012
M62843-1|AAA58396.1| 380|Homo sapiens brain protein protein. 39 0.012
BT009793-1|AAP88795.1| 326|Homo sapiens ELAV (embryonic lethal,... 39 0.012
BC036071-1|AAH36071.1| 366|Homo sapiens ELAVL4 protein protein. 39 0.012
BC028239-1|AAH28239.1| 616|Homo sapiens cleavage stimulation fa... 39 0.012
BC003376-1|AAH03376.1| 326|Homo sapiens ELAV (embryonic lethal,... 39 0.012
AY130299-1|AAN05429.1| 616|Homo sapiens tCstF-64 protein. 39 0.012
AY033998-1|AAK57541.1| 380|Homo sapiens HUDPRO1 protein. 39 0.012
AY033997-1|AAK57540.1| 366|Homo sapiens HUD1 protein. 39 0.012
AY033996-1|AAK57539.1| 383|Homo sapiens HUD4 protein. 39 0.012
AY033995-1|AAK57538.1| 366|Homo sapiens HUD3 protein. 39 0.012
AL592182-6|CAI15792.1| 385|Homo sapiens ELAV (embryonic lethal,... 39 0.012
AL592182-5|CAI15793.1| 371|Homo sapiens ELAV (embryonic lethal,... 39 0.012
AL592182-4|CAI15791.1| 380|Homo sapiens ELAV (embryonic lethal,... 39 0.012
AL592182-3|CAI15790.1| 366|Homo sapiens ELAV (embryonic lethal,... 39 0.012
AL592182-2|CAI15789.1| 383|Homo sapiens ELAV (embryonic lethal,... 39 0.012
AL592182-1|CAI15788.1| 366|Homo sapiens ELAV (embryonic lethal,... 39 0.012
AL583843-6|CAI14638.1| 385|Homo sapiens ELAV (embryonic lethal,... 39 0.012
AL583843-5|CAI14639.1| 371|Homo sapiens ELAV (embryonic lethal,... 39 0.012
AL583843-4|CAI14637.1| 380|Homo sapiens ELAV (embryonic lethal,... 39 0.012
AL583843-3|CAI14636.1| 366|Homo sapiens ELAV (embryonic lethal,... 39 0.012
AL583843-2|CAI14635.1| 383|Homo sapiens ELAV (embryonic lethal,... 39 0.012
AL583843-1|CAI14634.1| 366|Homo sapiens ELAV (embryonic lethal,... 39 0.012
Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation fact... 38 0.016
Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation fact... 38 0.016
Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein. 38 0.016
U28686-1|AAB17212.1| 157|Homo sapiens RNPL protein. 38 0.016
M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation fact... 38 0.016
BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation fa... 38 0.016
BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage sti... 38 0.016
BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation fa... 38 0.016
BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif prote... 38 0.016
BC006825-1|AAH06825.1| 157|Homo sapiens RNA binding motif (RNP1... 38 0.016
BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif prote... 38 0.016
AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear r... 38 0.016
AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif prote... 38 0.016
AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein. 38 0.016
DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein. 38 0.021
BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif prote... 38 0.021
AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif prote... 38 0.021
AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif prote... 38 0.021
AY547318-1|AAS55633.1| 236|Homo sapiens unknown protein. 38 0.027
AL136305-1|CAC36889.1| 236|Homo sapiens protein ( Human DNA seq... 38 0.027
AK095016-1|BAC04474.1| 211|Homo sapiens protein ( Homo sapiens ... 38 0.027
Z95327-4|CAI42681.1| 225|Homo sapiens cleavage stimulation fact... 37 0.036
AK222574-1|BAD96294.1| 616|Homo sapiens cleavage stimulation fa... 37 0.048
AF279289-1|AAF82129.1| 386|Homo sapiens testes-specific heterog... 34 0.25
M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein. 34 0.34
BC066549-1|AAH66549.1| 474|Homo sapiens RNA binding motif prote... 34 0.34
BC037837-1|AAH37837.2| 248|Homo sapiens Unknown (protein for MG... 34 0.34
BC006516-1|AAH06516.3| 482|Homo sapiens NCL protein protein. 34 0.34
BC006494-1|AAH06494.3| 482|Homo sapiens NCL protein protein. 34 0.34
BC002343-1|AAH02343.3| 482|Homo sapiens NCL protein protein. 34 0.34
AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens ... 34 0.34
AF526533-1|AAM88417.1| 328|Homo sapiens putative RNA binding pr... 34 0.34
AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein. 34 0.34
AB036991-1|BAC16207.1| 476|Homo sapiens developmentally regulat... 34 0.34
U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein. 33 0.44
M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein pr... 33 0.44
BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear r... 33 0.44
BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear r... 33 0.44
BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear r... 33 0.44
BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear r... 33 0.44
BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear r... 33 0.44
AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear r... 33 0.44
AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens ... 33 0.44
AF069682-1|AAC24858.2| 392|Homo sapiens testes specific heterog... 33 0.44
BC105582-1|AAI05583.1| 173|Homo sapiens RBMX2 protein protein. 33 0.59
BC033750-1|AAH33750.1| 322|Homo sapiens RNA binding motif prote... 33 0.59
BC003676-1|AAH03676.1| 163|Homo sapiens Unknown (protein for IM... 33 0.59
AL050405-1|CAB43745.1| 322|Homo sapiens hypothetical protein pr... 33 0.59
AL035423-8|CAI42444.1| 322|Homo sapiens RNA binding motif prote... 33 0.59
AF151837-1|AAD34074.1| 351|Homo sapiens CGI-79 protein protein. 33 0.59
AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens ... 33 0.77
U30883-1|AAA93073.1| 344|Homo sapiens SRp55-1 protein. 32 1.0
U30829-1|AAA93072.1| 335|Homo sapiens SRp55-3 protein. 32 1.0
BC006832-1|AAH06832.1| 344|Homo sapiens splicing factor, argini... 32 1.0
AL031681-3|CAB43960.1| 344|Homo sapiens splicing factor, argini... 32 1.0
AB208976-1|BAD92213.1| 279|Homo sapiens arginine/serine-rich sp... 32 1.0
BC057796-1|AAH57796.1| 392|Homo sapiens RNA binding motif prote... 32 1.4
AL450998-14|CAH70862.1| 296|Homo sapiens SMART/HDAC1 associated... 32 1.4
AL450998-10|CAH70858.1| 3664|Homo sapiens SMART/HDAC1 associated... 32 1.4
AL096858-1|CAB51072.1| 3261|Homo sapiens hypothetical protein pr... 32 1.4
AL034555-6|CAI19528.1| 296|Homo sapiens SMART/HDAC1 associated ... 32 1.4
AL034555-4|CAI19526.1| 3664|Homo sapiens SMART/HDAC1 associated ... 32 1.4
AF356524-1|AAK52750.1| 3664|Homo sapiens nuclear receptor transc... 32 1.4
BC001526-1|AAH01526.1| 328|Homo sapiens musashi homolog 2 (Dros... 31 1.8
AK093888-1|BAC04244.1| 251|Homo sapiens protein ( Homo sapiens ... 31 1.8
CR541805-1|CAG46604.1| 174|Homo sapiens RBM8A protein. 31 3.1
BC071577-1|AAH71577.1| 174|Homo sapiens RNA binding motif prote... 31 3.1
BC017088-1|AAH17088.1| 174|Homo sapiens RNA binding motif prote... 31 3.1
AF403012-1|AAL26999.1| 174|Homo sapiens ribonucleoprotein RBM8 ... 31 3.1
AF299118-1|AAG27091.1| 174|Homo sapiens RNA-binding protein Y14... 31 3.1
AF231512-1|AAG16782.1| 158|Homo sapiens RNA binding motif prote... 31 3.1
AF231511-1|AAG16781.1| 173|Homo sapiens RNA binding motif prote... 31 3.1
AF198620-1|AAF37551.1| 173|Homo sapiens RNA binding motif prote... 31 3.1
AF182415-1|AAG14951.1| 158|Homo sapiens MDS014 protein. 31 3.1
AF127761-1|AAD21089.1| 174|Homo sapiens ribonucleoprotein RBM8 ... 31 3.1
BC130001-1|AAI30002.1| 255|Homo sapiens LOC390748 protein protein. 30 4.1
BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif prote... 30 5.5
AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif prote... 30 5.5
AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens ... 30 5.5
L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein. 29 7.2
BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,... 29 7.2
BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,... 29 7.2
BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,... 29 7.2
AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor... 29 7.2
AF247662-1|AAF72519.1| 228|Homo sapiens SR-related protein LD2 ... 29 7.2
AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein. 29 7.2
U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein. 29 9.5
M94630-1|AAA35781.1| 328|Homo sapiens DNA-binding protein protein. 29 9.5
D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear rib... 29 9.5
D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear rib... 29 9.5
D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear rib... 29 9.5
D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear rib... 29 9.5
D26158-1|BAA21838.1| 350|Homo sapiens PLE21 protein protein. 29 9.5
CR541823-1|CAG46622.1| 174|Homo sapiens RBM8A protein. 29 9.5
BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear r... 29 9.5
BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear r... 29 9.5
BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear r... 29 9.5
AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear r... 29 9.5
AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear r... 29 9.5
AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear r... 29 9.5
AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear r... 29 9.5
AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein. 29 9.5
AC003982-3|AAB95636.1| 362|Homo sapiens WUGSC:H_166H1.2 protein. 29 9.5
AB073212-1|BAB70469.1| 179|Homo sapiens Musashi1 protein. 29 9.5
AB072592-1|BAB69769.1| 181|Homo sapiens Musashi1 protein. 29 9.5
AB072591-1|BAB69768.1| 181|Homo sapiens Musashi1 protein. 29 9.5
AB072590-1|BAB69767.1| 180|Homo sapiens Musashi1 protein. 29 9.5
AB012851-1|BAA33962.1| 362|Homo sapiens Musashi protein. 29 9.5
>X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein.
Length = 221
Score = 136 bits (330), Expect = 3e-32
Identities = 61/93 (65%), Positives = 73/93 (78%)
Frame = +3
Query: 96 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXX 275
MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDRYT+ES
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 276 XXXXXXXXEEALDSLDGRMLDGRELRVQMARYG 374
E+A+D++DG +LDGRELRVQMARYG
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein.
Length = 221
Score = 136 bits (330), Expect = 3e-32
Identities = 61/93 (65%), Positives = 73/93 (78%)
Frame = +3
Query: 96 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXX 275
MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDRYT+ES
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 276 XXXXXXXXEEALDSLDGRMLDGRELRVQMARYG 374
E+A+D++DG +LDGRELRVQMARYG
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 protein.
Length = 221
Score = 136 bits (330), Expect = 3e-32
Identities = 61/93 (65%), Positives = 73/93 (78%)
Frame = +3
Query: 96 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXX 275
MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDRYT+ES
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 276 XXXXXXXXEEALDSLDGRMLDGRELRVQMARYG 374
E+A+D++DG +LDGRELRVQMARYG
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 protein.
Length = 221
Score = 136 bits (330), Expect = 3e-32
Identities = 61/93 (65%), Positives = 73/93 (78%)
Frame = +3
Query: 96 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXX 275
MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDRYT+ES
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 276 XXXXXXXXEEALDSLDGRMLDGRELRVQMARYG 374
E+A+D++DG +LDGRELRVQMARYG
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein.
Length = 221
Score = 136 bits (330), Expect = 3e-32
Identities = 61/93 (65%), Positives = 73/93 (78%)
Frame = +3
Query: 96 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXX 275
MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDRYT+ES
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 276 XXXXXXXXEEALDSLDGRMLDGRELRVQMARYG 374
E+A+D++DG +LDGRELRVQMARYG
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein.
Length = 221
Score = 136 bits (330), Expect = 3e-32
Identities = 61/93 (65%), Positives = 73/93 (78%)
Frame = +3
Query: 96 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXX 275
MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDRYT+ES
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 276 XXXXXXXXEEALDSLDGRMLDGRELRVQMARYG 374
E+A+D++DG +LDGRELRVQMARYG
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 variant protein.
Length = 221
Score = 136 bits (330), Expect = 3e-32
Identities = 61/93 (65%), Positives = 73/93 (78%)
Frame = +3
Query: 96 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXX 275
MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDRYT+ES
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 276 XXXXXXXXEEALDSLDGRMLDGRELRVQMARYG 374
E+A+D++DG +LDGRELRVQMARYG
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>M90104-1|AAA60306.1| 221|Homo sapiens splicing factor protein.
Length = 221
Score = 133 bits (322), Expect = 3e-31
Identities = 60/93 (64%), Positives = 72/93 (77%)
Frame = +3
Query: 96 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXX 275
MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ VGD+YIPRDRYT+ES
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYRRVGDVYIPRDRYTKESRGFAFV 60
Query: 276 XXXXXXXXEEALDSLDGRMLDGRELRVQMARYG 374
E+A+D++DG +LDGRELRVQMARYG
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ35170 fis, clone PLACE6012942, highly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 2. ).
Length = 201
Score = 133 bits (321), Expect = 4e-31
Identities = 60/93 (64%), Positives = 72/93 (77%)
Frame = +3
Query: 96 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXX 275
MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDRYT+ES
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 276 XXXXXXXXEEALDSLDGRMLDGRELRVQMARYG 374
E+A+D++DG +LDGRELRVQMAR G
Sbjct: 61 RFHDKRDAEDAMDAMDGAVLDGRELRVQMARCG 93
>BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein.
Length = 275
Score = 115 bits (276), Expect = 1e-25
Identities = 52/93 (55%), Positives = 67/93 (72%)
Frame = +3
Query: 96 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXX 275
MS GRPPP +DGM++LKVDNLTYRT+P+ LRRVFE+ G VGD+YIPR+ +T+
Sbjct: 1 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFV 60
Query: 276 XXXXXXXXEEALDSLDGRMLDGRELRVQMARYG 374
++A ++DG LDGRELRVQ+ARYG
Sbjct: 61 RFHDRRDAQDAEAAMDGAELDGRELRVQVARYG 93
>AF031165-1|AAK54350.1| 282|Homo sapiens SRp46 splicing factor
protein.
Length = 282
Score = 115 bits (276), Expect = 1e-25
Identities = 52/93 (55%), Positives = 67/93 (72%)
Frame = +3
Query: 96 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXX 275
MS GRPPP +DGM++LKVDNLTYRT+P+ LRRVFE+ G VGD+YIPR+ +T+
Sbjct: 1 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFV 60
Query: 276 XXXXXXXXEEALDSLDGRMLDGRELRVQMARYG 374
++A ++DG LDGRELRVQ+ARYG
Sbjct: 61 RFHDRRDAQDAEAAMDGAELDGRELRVQVARYG 93
>BC066958-1|AAH66958.1| 179|Homo sapiens SFRS2 protein protein.
Length = 179
Score = 108 bits (259), Expect = 1e-23
Identities = 47/77 (61%), Positives = 58/77 (75%)
Frame = +3
Query: 96 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXX 275
MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDRYT+ES
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 276 XXXXXXXXEEALDSLDG 326
E+A+D++DG
Sbjct: 61 RFHDKRDAEDAMDAMDG 77
>AK093626-1|BAC04206.1| 186|Homo sapiens protein ( Homo sapiens
cDNA FLJ36307 fis, clone THYMU2004906, moderately
similar to SPLICING FACTOR, ARGININE/SERINE-RICH 2. ).
Length = 186
Score = 108 bits (259), Expect = 1e-23
Identities = 47/77 (61%), Positives = 58/77 (75%)
Frame = +3
Query: 96 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXX 275
MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDRYT+ES
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 276 XXXXXXXXEEALDSLDG 326
E+A+D++DG
Sbjct: 61 RFHDKRDAEDAMDAMDG 77
>AF031166-1|AAK54351.1| 272|Homo sapiens SRp46 splicing factor
protein.
Length = 272
Score = 99.1 bits (236), Expect = 8e-21
Identities = 45/83 (54%), Positives = 59/83 (71%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEE 305
DGM++LKVDNLTYRT+P+ LRRVFE+ G VGD+YIPR+ +T+ ++
Sbjct: 1 DGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQD 60
Query: 306 ALDSLDGRMLDGRELRVQMARYG 374
A ++DG LDGRELRVQ+ARYG
Sbjct: 61 AEAAMDGAELDGRELRVQVARYG 83
>L03693-1|AAA60162.1| 34|Homo sapiens splicing factor protein.
Length = 34
Score = 64.5 bits (150), Expect = 2e-10
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = +3
Query: 96 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVF 197
MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVF
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVF 34
>BC021715-1|AAH21715.1| 261|Homo sapiens serine-arginine repressor
protein (35 kDa) protein.
Length = 261
Score = 57.6 bits (133), Expect = 2e-08
Identities = 33/89 (37%), Positives = 46/89 (51%)
Frame = +3
Query: 102 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXX 281
Y RPP SL + N+ T PEDLRR F R G + D+YIP D YTR
Sbjct: 4 YTRPPN-----TSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQF 58
Query: 282 XXXXXXEEALDSLDGRMLDGRELRVQMAR 368
E+AL +L+ + + GR++ +Q A+
Sbjct: 59 EDVRGAEDALYNLNRKWVCGRQIEIQFAQ 87
>AF449428-1|AAL57515.1| 261|Homo sapiens SRrp35 protein.
Length = 261
Score = 57.6 bits (133), Expect = 2e-08
Identities = 33/89 (37%), Positives = 46/89 (51%)
Frame = +3
Query: 102 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXX 281
Y RPP SL + N+ T PEDLRR F R G + D+YIP D YTR
Sbjct: 4 YTRPPN-----TSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQF 58
Query: 282 XXXXXXEEALDSLDGRMLDGRELRVQMAR 368
E+AL +L+ + + GR++ +Q A+
Sbjct: 59 EDVRDAEDALYNLNRKWVCGRQIEIQFAQ 87
>BC010074-1|AAH10074.1| 173|Homo sapiens FUSIP1 protein protein.
Length = 173
Score = 56.4 bits (130), Expect = 6e-08
Identities = 33/89 (37%), Positives = 45/89 (50%)
Frame = +3
Query: 102 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXX 281
Y RPP SL V N+ T EDLRR F R G + D+Y+P D YTR
Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 282 XXXXXXEEALDSLDGRMLDGRELRVQMAR 368
E+AL +LD + + GR++ +Q A+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQ 87
>BC005039-1|AAH05039.1| 262|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 262
Score = 56.4 bits (130), Expect = 6e-08
Identities = 33/89 (37%), Positives = 45/89 (50%)
Frame = +3
Query: 102 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXX 281
Y RPP SL V N+ T EDLRR F R G + D+Y+P D YTR
Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 282 XXXXXXEEALDSLDGRMLDGRELRVQMAR 368
E+AL +LD + + GR++ +Q A+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQ 87
>BC001107-1|AAH01107.1| 183|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 183
Score = 56.4 bits (130), Expect = 6e-08
Identities = 33/89 (37%), Positives = 45/89 (50%)
Frame = +3
Query: 102 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXX 281
Y RPP SL V N+ T EDLRR F R G + D+Y+P D YTR
Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 282 XXXXXXEEALDSLDGRMLDGRELRVQMAR 368
E+AL +LD + + GR++ +Q A+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQ 87
>AY150181-1|AAN65381.1| 183|Homo sapiens splicing factor SRp38-2
protein.
Length = 183
Score = 56.4 bits (130), Expect = 6e-08
Identities = 33/89 (37%), Positives = 45/89 (50%)
Frame = +3
Query: 102 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXX 281
Y RPP SL V N+ T EDLRR F R G + D+Y+P D YTR
Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 282 XXXXXXEEALDSLDGRMLDGRELRVQMAR 368
E+AL +LD + + GR++ +Q A+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQ 87
>AY150180-1|AAN65380.1| 262|Homo sapiens splicing factor SRp38
protein.
Length = 262
Score = 56.4 bits (130), Expect = 6e-08
Identities = 33/89 (37%), Positives = 45/89 (50%)
Frame = +3
Query: 102 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXX 281
Y RPP SL V N+ T EDLRR F R G + D+Y+P D YTR
Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 282 XXXXXXEEALDSLDGRMLDGRELRVQMAR 368
E+AL +LD + + GR++ +Q A+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQ 87
>AY048592-2|AAL06099.1| 262|Homo sapiens TLS-associated SR protein
2 protein.
Length = 262
Score = 56.4 bits (130), Expect = 6e-08
Identities = 33/89 (37%), Positives = 45/89 (50%)
Frame = +3
Query: 102 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXX 281
Y RPP SL V N+ T EDLRR F R G + D+Y+P D YTR
Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 282 XXXXXXEEALDSLDGRMLDGRELRVQMAR 368
E+AL +LD + + GR++ +Q A+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQ 87
>AY048592-1|AAL06098.1| 183|Homo sapiens TLS-associated SR protein
1 protein.
Length = 183
Score = 56.4 bits (130), Expect = 6e-08
Identities = 33/89 (37%), Positives = 45/89 (50%)
Frame = +3
Query: 102 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXX 281
Y RPP SL V N+ T EDLRR F R G + D+Y+P D YTR
Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 282 XXXXXXEEALDSLDGRMLDGRELRVQMAR 368
E+AL +LD + + GR++ +Q A+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQ 87
>AL590609-10|CAI14808.1| 262|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 262
Score = 56.4 bits (130), Expect = 6e-08
Identities = 33/89 (37%), Positives = 45/89 (50%)
Frame = +3
Query: 102 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXX 281
Y RPP SL V N+ T EDLRR F R G + D+Y+P D YTR
Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 282 XXXXXXEEALDSLDGRMLDGRELRVQMAR 368
E+AL +LD + + GR++ +Q A+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQ 87
>AL590609-9|CAI14807.1| 261|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 261
Score = 56.4 bits (130), Expect = 6e-08
Identities = 33/89 (37%), Positives = 45/89 (50%)
Frame = +3
Query: 102 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXX 281
Y RPP SL V N+ T EDLRR F R G + D+Y+P D YTR
Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 282 XXXXXXEEALDSLDGRMLDGRELRVQMAR 368
E+AL +LD + + GR++ +Q A+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQ 87
>AL590609-8|CAI14805.1| 173|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 173
Score = 56.4 bits (130), Expect = 6e-08
Identities = 33/89 (37%), Positives = 45/89 (50%)
Frame = +3
Query: 102 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXX 281
Y RPP SL V N+ T EDLRR F R G + D+Y+P D YTR
Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 282 XXXXXXEEALDSLDGRMLDGRELRVQMAR 368
E+AL +LD + + GR++ +Q A+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQ 87
>AL590609-7|CAI14806.1| 172|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 172
Score = 56.4 bits (130), Expect = 6e-08
Identities = 33/89 (37%), Positives = 45/89 (50%)
Frame = +3
Query: 102 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXX 281
Y RPP SL V N+ T EDLRR F R G + D+Y+P D YTR
Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 282 XXXXXXEEALDSLDGRMLDGRELRVQMAR 368
E+AL +LD + + GR++ +Q A+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQ 87
>AL590609-6|CAI14803.1| 183|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 183
Score = 56.4 bits (130), Expect = 6e-08
Identities = 33/89 (37%), Positives = 45/89 (50%)
Frame = +3
Query: 102 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXX 281
Y RPP SL V N+ T EDLRR F R G + D+Y+P D YTR
Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 282 XXXXXXEEALDSLDGRMLDGRELRVQMAR 368
E+AL +LD + + GR++ +Q A+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQ 87
>AL590609-5|CAI14804.1| 182|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 182
Score = 56.4 bits (130), Expect = 6e-08
Identities = 33/89 (37%), Positives = 45/89 (50%)
Frame = +3
Query: 102 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXX 281
Y RPP SL V N+ T EDLRR F R G + D+Y+P D YTR
Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 282 XXXXXXEEALDSLDGRMLDGRELRVQMAR 368
E+AL +LD + + GR++ +Q A+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQ 87
>AK222994-1|BAD96714.1| 262|Homo sapiens FUS interacting protein
(serine-arginine rich) 1 isoform 2 variant protein.
Length = 262
Score = 56.4 bits (130), Expect = 6e-08
Identities = 33/89 (37%), Positives = 45/89 (50%)
Frame = +3
Query: 102 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXX 281
Y RPP SL V N+ T EDLRR F R G + D+Y+P D YTR
Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 282 XXXXXXEEALDSLDGRMLDGRELRVQMAR 368
E+AL +LD + + GR++ +Q A+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQ 87
>AK001286-1|BAA91601.1| 183|Homo sapiens protein ( Homo sapiens
cDNA FLJ10424 fis, clone NT2RP1000272, highly similar to
Homo sapiens TLS-associated protein TASR-2 mRNA. ).
Length = 183
Score = 56.4 bits (130), Expect = 6e-08
Identities = 33/89 (37%), Positives = 45/89 (50%)
Frame = +3
Query: 102 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXX 281
Y RPP SL V N+ T EDLRR F R G + D+Y+P D YTR
Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 282 XXXXXXEEALDSLDGRMLDGRELRVQMAR 368
E+AL +LD + + GR++ +Q A+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQ 87
>AF449427-1|AAL57514.1| 262|Homo sapiens SRrp40 protein.
Length = 262
Score = 56.4 bits (130), Expect = 6e-08
Identities = 33/89 (37%), Positives = 45/89 (50%)
Frame = +3
Query: 102 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXX 281
Y RPP SL V N+ T EDLRR F R G + D+Y+P D YTR
Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 282 XXXXXXEEALDSLDGRMLDGRELRVQMAR 368
E+AL +LD + + GR++ +Q A+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQ 87
>AF419332-1|AAL16666.1| 261|Homo sapiens TLS-associated protein
TASR-2 protein.
Length = 261
Score = 56.4 bits (130), Expect = 6e-08
Identities = 33/89 (37%), Positives = 45/89 (50%)
Frame = +3
Query: 102 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXX 281
Y RPP SL V N+ T EDLRR F R G + D+Y+P D YTR
Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 282 XXXXXXEEALDSLDGRMLDGRELRVQMAR 368
E+AL +LD + + GR++ +Q A+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQ 87
>AF419331-1|AAL16665.1| 183|Homo sapiens TLS-associated protein
TASR-1 protein.
Length = 183
Score = 56.4 bits (130), Expect = 6e-08
Identities = 33/89 (37%), Positives = 45/89 (50%)
Frame = +3
Query: 102 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXX 281
Y RPP SL V N+ T EDLRR F R G + D+Y+P D YTR
Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 282 XXXXXXEEALDSLDGRMLDGRELRVQMAR 368
E+AL +LD + + GR++ +Q A+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQ 87
>AF067730-1|AAC26727.1| 262|Homo sapiens TLS-associated protein
TASR-2 protein.
Length = 262
Score = 56.4 bits (130), Expect = 6e-08
Identities = 33/89 (37%), Positives = 45/89 (50%)
Frame = +3
Query: 102 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXX 281
Y RPP SL V N+ T EDLRR F R G + D+Y+P D YTR
Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 282 XXXXXXEEALDSLDGRMLDGRELRVQMAR 368
E+AL +LD + + GR++ +Q A+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQ 87
>AF047448-1|AAC70918.1| 183|Homo sapiens TLS-associated protein
TASR protein.
Length = 183
Score = 56.4 bits (130), Expect = 6e-08
Identities = 33/89 (37%), Positives = 45/89 (50%)
Frame = +3
Query: 102 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXX 281
Y RPP SL V N+ T EDLRR F R G + D+Y+P D YTR
Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 282 XXXXXXEEALDSLDGRMLDGRELRVQMAR 368
E+AL +LD + + GR++ +Q A+
Sbjct: 59 EDVRDAEDALHNLDRKWICGRQIEIQFAQ 87
>AL353135-4|CAI16247.1| 262|Homo sapiens RP11-63L7.3 protein.
Length = 262
Score = 53.2 bits (122), Expect = 5e-07
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +3
Query: 102 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRE-SXXXXXXX 278
Y RPP SL + N+ T PEDLRR F R G + D+YIP D YTR
Sbjct: 4 YTRPPN-----TSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYLVI 58
Query: 279 XXXXXXXEEALDSLDGRMLDGRELRVQMAR 368
E+AL +L+ + + GR++ +Q A+
Sbjct: 59 FEDVRDAEDALYNLNRKWVCGRQIEIQFAQ 88
>D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 47.6 bits (108), Expect = 3e-05
Identities = 20/75 (26%), Positives = 42/75 (56%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSL 320
L V L++ T + L +VF + G++ ++ + +DR T+ S ++A+ ++
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 321 DGRMLDGRELRVQMA 365
+G+ +DGR++RV A
Sbjct: 68 NGKSVDGRQIRVDQA 82
>BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 47.6 bits (108), Expect = 3e-05
Identities = 20/75 (26%), Positives = 42/75 (56%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSL 320
L V L++ T + L +VF + G++ ++ + +DR T+ S ++A+ ++
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 321 DGRMLDGRELRVQMA 365
+G+ +DGR++RV A
Sbjct: 68 NGKSVDGRQIRVDQA 82
>BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 47.6 bits (108), Expect = 3e-05
Identities = 20/75 (26%), Positives = 42/75 (56%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSL 320
L V L++ T + L +VF + G++ ++ + +DR T+ S ++A+ ++
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 321 DGRMLDGRELRVQMA 365
+G+ +DGR++RV A
Sbjct: 68 NGKSVDGRQIRVDQA 82
>BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 47.6 bits (108), Expect = 3e-05
Identities = 20/75 (26%), Positives = 42/75 (56%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSL 320
L V L++ T + L +VF + G++ ++ + +DR T+ S ++A+ ++
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 321 DGRMLDGRELRVQMA 365
+G+ +DGR++RV A
Sbjct: 68 NGKSVDGRQIRVDQA 82
>AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RNA
binding protein protein.
Length = 172
Score = 47.6 bits (108), Expect = 3e-05
Identities = 20/75 (26%), Positives = 42/75 (56%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSL 320
L V L++ T + L +VF + G++ ++ + +DR T+ S ++A+ ++
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 321 DGRMLDGRELRVQMA 365
+G+ +DGR++RV A
Sbjct: 68 NGKSVDGRQIRVDQA 82
>AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 47.6 bits (108), Expect = 3e-05
Identities = 20/75 (26%), Positives = 42/75 (56%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSL 320
L V L++ T + L +VF + G++ ++ + +DR T+ S ++A+ ++
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 321 DGRMLDGRELRVQMA 365
+G+ +DGR++RV A
Sbjct: 68 NGKSVDGRQIRVDQA 82
>CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein.
Length = 357
Score = 43.6 bits (98), Expect = 4e-04
Identities = 28/78 (35%), Positives = 37/78 (47%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSL 320
L V NL T ED +R+FER GE +++I RDR E A L
Sbjct: 48 LFVGNLPTDITEEDFKRLFERYGEPSEVFINRDR------GFGFIRLESRTLAEIAKAEL 101
Query: 321 DGRMLDGRELRVQMARYG 374
DG +L R LR++ A +G
Sbjct: 102 DGTILKSRPLRIRFATHG 119
>BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein.
Length = 393
Score = 43.6 bits (98), Expect = 4e-04
Identities = 28/78 (35%), Positives = 37/78 (47%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSL 320
L V NL T ED +R+FER GE +++I RDR E A L
Sbjct: 84 LFVGNLPTDITEEDFKRLFERYGEPSEVFINRDR------GFGFIRLESRTLAEIAKAEL 137
Query: 321 DGRMLDGRELRVQMARYG 374
DG +L R LR++ A +G
Sbjct: 138 DGTILKSRPLRIRFATHG 155
>AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1
protein.
Length = 248
Score = 43.6 bits (98), Expect = 4e-04
Identities = 28/78 (35%), Positives = 37/78 (47%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSL 320
L V NL T ED +R+FER GE +++I RDR E A L
Sbjct: 84 LFVGNLPTDITEEDFKRLFERYGEPSEVFINRDR------GFGFIRLESRTLAEIAKAEL 137
Query: 321 DGRMLDGRELRVQMARYG 374
DG +L R LR++ A +G
Sbjct: 138 DGTILKSRPLRIRFATHG 155
>AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1
protein.
Length = 523
Score = 43.6 bits (98), Expect = 4e-04
Identities = 28/78 (35%), Positives = 37/78 (47%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSL 320
L V NL T ED +R+FER GE +++I RDR E A L
Sbjct: 84 LFVGNLPTDITEEDFKRLFERYGEPSEVFINRDR------GFGFIRLESRTLAEIAKAEL 137
Query: 321 DGRMLDGRELRVQMARYG 374
DG +L R LR++ A +G
Sbjct: 138 DGTILKSRPLRIRFATHG 155
>AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens
cDNA FLJ10955 fis, clone PLACE1000406, moderately
similar to PTB-ASSOCIATED SPLICING FACTOR. ).
Length = 357
Score = 43.6 bits (98), Expect = 4e-04
Identities = 28/78 (35%), Positives = 37/78 (47%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSL 320
L V NL T ED +R+FER GE +++I RDR E A L
Sbjct: 48 LFVGNLPTDITEEDFKRLFERYGEPSEVFINRDR------GFGFIRLESRTLAEIAKAEL 101
Query: 321 DGRMLDGRELRVQMARYG 374
DG +L R LR++ A +G
Sbjct: 102 DGTILKSRPLRIRFATHG 119
>AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 beta
isoform protein.
Length = 393
Score = 43.6 bits (98), Expect = 4e-04
Identities = 28/78 (35%), Positives = 37/78 (47%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSL 320
L V NL T ED +R+FER GE +++I RDR E A L
Sbjct: 84 LFVGNLPTDITEEDFKRLFERYGEPSEVFINRDR------GFGFIRLESRTLAEIAKAEL 137
Query: 321 DGRMLDGRELRVQMARYG 374
DG +L R LR++ A +G
Sbjct: 138 DGTILKSRPLRIRFATHG 155
>AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1
alpha isoform protein.
Length = 523
Score = 43.6 bits (98), Expect = 4e-04
Identities = 28/78 (35%), Positives = 37/78 (47%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSL 320
L V NL T ED +R+FER GE +++I RDR E A L
Sbjct: 84 LFVGNLPTDITEEDFKRLFERYGEPSEVFINRDR------GFGFIRLESRTLAEIAKAEL 137
Query: 321 DGRMLDGRELRVQMARYG 374
DG +L R LR++ A +G
Sbjct: 138 DGTILKSRPLRIRFATHG 155
>BC071575-1|AAH71575.1| 69|Homo sapiens FUSIP1 protein protein.
Length = 69
Score = 41.1 bits (92), Expect = 0.002
Identities = 24/50 (48%), Positives = 28/50 (56%)
Frame = +3
Query: 102 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTR 251
Y RPP SL V N+ T EDLRR F R G + D+Y+P D YTR
Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTR 48
>U29943-1|AAA70417.1| 346|Homo sapiens Hel-N2 protein.
Length = 346
Score = 39.1 bits (87), Expect = 0.009
Identities = 22/81 (27%), Positives = 39/81 (48%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEE 305
D +L V+ L T E+L+ +F GE+ + RD+ T +S E+
Sbjct: 36 DSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 95
Query: 306 ALDSLDGRMLDGRELRVQMAR 368
A+++L+G L + ++V AR
Sbjct: 96 AINTLNGLRLQTKTIKVSYAR 116
Score = 31.1 bits (67), Expect = 2.4
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +3
Query: 90 IKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXX 269
IK+SY RP +L V L T ++L ++F + G + I D+ T S
Sbjct: 110 IKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVG 169
Query: 270 XXXXXXXXXXEEALDSLDGRMLDG 341
EEA+ L+G+ G
Sbjct: 170 FIRFDKRIEAEEAIKGLNGQKPPG 193
>U12431-1|AAA69698.1| 359|Homo sapiens ELAV-like neuronal protein 1
protein.
Length = 359
Score = 39.1 bits (87), Expect = 0.009
Identities = 22/81 (27%), Positives = 39/81 (48%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEE 305
D +L V+ L T E+L+ +F GE+ + RD+ T +S E+
Sbjct: 36 DSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 95
Query: 306 ALDSLDGRMLDGRELRVQMAR 368
A+++L+G L + ++V AR
Sbjct: 96 AINTLNGLRLQTKTIKVSYAR 116
Score = 31.1 bits (67), Expect = 2.4
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +3
Query: 90 IKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXX 269
IK+SY RP +L V L T ++L ++F + G + I D+ T S
Sbjct: 110 IKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVG 169
Query: 270 XXXXXXXXXXEEALDSLDGRMLDG 341
EEA+ L+G+ G
Sbjct: 170 FIRFDKRIEAEEAIKGLNGQKPPG 193
>BC030692-1|AAH30692.1| 346|Homo sapiens ELAVL2 protein protein.
Length = 346
Score = 39.1 bits (87), Expect = 0.009
Identities = 22/81 (27%), Positives = 39/81 (48%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEE 305
D +L V+ L T E+L+ +F GE+ + RD+ T +S E+
Sbjct: 36 DSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 95
Query: 306 ALDSLDGRMLDGRELRVQMAR 368
A+++L+G L + ++V AR
Sbjct: 96 AINTLNGLRLQTKTIKVSYAR 116
Score = 31.1 bits (67), Expect = 2.4
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +3
Query: 90 IKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXX 269
IK+SY RP +L V L T ++L ++F + G + I D+ T S
Sbjct: 110 IKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVG 169
Query: 270 XXXXXXXXXXEEALDSLDGRMLDG 341
EEA+ L+G+ G
Sbjct: 170 FIRFDKRIEAEEAIKGLNGQKPPG 193
>AL161628-4|CAI13378.1| 387|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 387
Score = 39.1 bits (87), Expect = 0.009
Identities = 22/81 (27%), Positives = 39/81 (48%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEE 305
D +L V+ L T E+L+ +F GE+ + RD+ T +S E+
Sbjct: 64 DSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 123
Query: 306 ALDSLDGRMLDGRELRVQMAR 368
A+++L+G L + ++V AR
Sbjct: 124 AINTLNGLRLQTKTIKVSYAR 144
Score = 31.1 bits (67), Expect = 2.4
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +3
Query: 90 IKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXX 269
IK+SY RP +L V L T ++L ++F + G + I D+ T S
Sbjct: 138 IKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVG 197
Query: 270 XXXXXXXXXXEEALDSLDGRMLDG 341
EEA+ L+G+ G
Sbjct: 198 FIRFDKRIEAEEAIKGLNGQKPPG 221
>AL161628-3|CAI13377.1| 189|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 189
Score = 39.1 bits (87), Expect = 0.009
Identities = 22/81 (27%), Positives = 39/81 (48%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEE 305
D +L V+ L T E+L+ +F GE+ + RD+ T +S E+
Sbjct: 36 DSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 95
Query: 306 ALDSLDGRMLDGRELRVQMAR 368
A+++L+G L + ++V AR
Sbjct: 96 AINTLNGLRLQTKTIKVSYAR 116
Score = 30.7 bits (66), Expect = 3.1
Identities = 22/80 (27%), Positives = 34/80 (42%)
Frame = +3
Query: 90 IKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXX 269
IK+SY RP +L V L T ++L ++F + G + I D+ T S
Sbjct: 110 IKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVG 169
Query: 270 XXXXXXXXXXEEALDSLDGR 329
EEA+ L+G+
Sbjct: 170 FIRFDKRIEAEEAIKGLNGQ 189
>AL161628-2|CAC22160.1| 359|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 359
Score = 39.1 bits (87), Expect = 0.009
Identities = 22/81 (27%), Positives = 39/81 (48%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEE 305
D +L V+ L T E+L+ +F GE+ + RD+ T +S E+
Sbjct: 36 DSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 95
Query: 306 ALDSLDGRMLDGRELRVQMAR 368
A+++L+G L + ++V AR
Sbjct: 96 AINTLNGLRLQTKTIKVSYAR 116
Score = 31.1 bits (67), Expect = 2.4
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +3
Query: 90 IKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXX 269
IK+SY RP +L V L T ++L ++F + G + I D+ T S
Sbjct: 110 IKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVG 169
Query: 270 XXXXXXXXXXEEALDSLDGRMLDG 341
EEA+ L+G+ G
Sbjct: 170 FIRFDKRIEAEEAIKGLNGQKPPG 193
>AL161628-1|CAI13376.1| 346|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 346
Score = 39.1 bits (87), Expect = 0.009
Identities = 22/81 (27%), Positives = 39/81 (48%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEE 305
D +L V+ L T E+L+ +F GE+ + RD+ T +S E+
Sbjct: 36 DSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 95
Query: 306 ALDSLDGRMLDGRELRVQMAR 368
A+++L+G L + ++V AR
Sbjct: 96 AINTLNGLRLQTKTIKVSYAR 116
Score = 31.1 bits (67), Expect = 2.4
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +3
Query: 90 IKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXX 269
IK+SY RP +L V L T ++L ++F + G + I D+ T S
Sbjct: 110 IKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVG 169
Query: 270 XXXXXXXXXXEEALDSLDGRMLDG 341
EEA+ L+G+ G
Sbjct: 170 FIRFDKRIEAEEAIKGLNGQKPPG 193
>AB209294-1|BAD92531.1| 367|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B) vari
protein.
Length = 367
Score = 39.1 bits (87), Expect = 0.009
Identities = 22/81 (27%), Positives = 39/81 (48%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEE 305
D +L V+ L T E+L+ +F GE+ + RD+ T +S E+
Sbjct: 44 DSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 103
Query: 306 ALDSLDGRMLDGRELRVQMAR 368
A+++L+G L + ++V AR
Sbjct: 104 AINTLNGLRLQTKTIKVSYAR 124
Score = 31.1 bits (67), Expect = 2.4
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +3
Query: 90 IKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXX 269
IK+SY RP +L V L T ++L ++F + G + I D+ T S
Sbjct: 118 IKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVG 177
Query: 270 XXXXXXXXXXEEALDSLDGRMLDG 341
EEA+ L+G+ G
Sbjct: 178 FIRFDKRIEAEEAIKGLNGQKPPG 201
>U38175-1|AAB41913.1| 326|Homo sapiens HuR RNA binding protein
protein.
Length = 326
Score = 38.7 bits (86), Expect = 0.012
Identities = 22/80 (27%), Positives = 36/80 (45%)
Frame = +3
Query: 129 GMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEA 308
G +L V+ L T ++LR +F GEV + RD+ S E A
Sbjct: 18 GRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERA 77
Query: 309 LDSLDGRMLDGRELRVQMAR 368
+++L+G L + ++V AR
Sbjct: 78 INTLNGLRLQSKTIKVSYAR 97
Score = 34.3 bits (75), Expect = 0.25
Identities = 22/84 (26%), Positives = 35/84 (41%)
Frame = +3
Query: 90 IKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXX 269
IK+SY RP + +L + L T +D+ +F R G + + + D+ T S
Sbjct: 91 IKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVA 150
Query: 270 XXXXXXXXXXEEALDSLDGRMLDG 341
EEA+ S +G G
Sbjct: 151 FIRFDKRSEAEEAITSFNGHKPPG 174
>M62843-1|AAA58396.1| 380|Homo sapiens brain protein protein.
Length = 380
Score = 38.7 bits (86), Expect = 0.012
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEE 305
D +L V+ L T E+ R +F GE+ + RD+ T +S E+
Sbjct: 43 DSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 102
Query: 306 ALDSLDGRMLDGRELRVQMAR 368
A+++L+G L + ++V AR
Sbjct: 103 AINTLNGLRLQTKTIKVSYAR 123
Score = 31.9 bits (69), Expect = 1.4
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +3
Query: 90 IKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXX 269
IK+SY RP +L V L T ++L ++F + G + I D+ T S
Sbjct: 117 IKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVG 176
Query: 270 XXXXXXXXXXEEALDSLDGRMLDG 341
EEA+ L+G+ G
Sbjct: 177 FIRFDKRIEAEEAIKGLNGQKPSG 200
>BT009793-1|AAP88795.1| 326|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 1 (Hu antigen R)
protein.
Length = 326
Score = 38.7 bits (86), Expect = 0.012
Identities = 22/80 (27%), Positives = 36/80 (45%)
Frame = +3
Query: 129 GMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEA 308
G +L V+ L T ++LR +F GEV + RD+ S E A
Sbjct: 18 GRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERA 77
Query: 309 LDSLDGRMLDGRELRVQMAR 368
+++L+G L + ++V AR
Sbjct: 78 INTLNGLRLQSKTIKVSYAR 97
Score = 34.3 bits (75), Expect = 0.25
Identities = 22/84 (26%), Positives = 35/84 (41%)
Frame = +3
Query: 90 IKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXX 269
IK+SY RP + +L + L T +D+ +F R G + + + D+ T S
Sbjct: 91 IKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVA 150
Query: 270 XXXXXXXXXXEEALDSLDGRMLDG 341
EEA+ S +G G
Sbjct: 151 FIRFDKRSEAEEAITSFNGHKPPG 174
>BC036071-1|AAH36071.1| 366|Homo sapiens ELAVL4 protein protein.
Length = 366
Score = 38.7 bits (86), Expect = 0.012
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEE 305
D +L V+ L T E+ R +F GE+ + RD+ T +S E+
Sbjct: 43 DSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 102
Query: 306 ALDSLDGRMLDGRELRVQMAR 368
A+++L+G L + ++V AR
Sbjct: 103 AINTLNGLRLQTKTIKVSYAR 123
Score = 29.1 bits (62), Expect = 9.5
Identities = 22/84 (26%), Positives = 34/84 (40%)
Frame = +3
Query: 90 IKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXX 269
IK+SY RP +L V L T ++L ++F + G + I + T S
Sbjct: 117 IKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVGQVTGVSRGVG 176
Query: 270 XXXXXXXXXXEEALDSLDGRMLDG 341
EEA+ L+G+ G
Sbjct: 177 FIRFDKRIEAEEAIKGLNGQKPSG 200
>BC028239-1|AAH28239.1| 616|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
protein.
Length = 616
Score = 38.7 bits (86), Expect = 0.012
Identities = 25/86 (29%), Positives = 35/86 (40%)
Frame = +3
Query: 108 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXX 287
R P + S+ V N+ Y T E L+ +F G V + DR T +
Sbjct: 7 RDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQD 66
Query: 288 XXXXEEALDSLDGRMLDGRELRVQMA 365
A+ +L+GR GR LRV A
Sbjct: 67 QETALSAMRNLNGREFSGRALRVDNA 92
>BC003376-1|AAH03376.1| 326|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 1 (Hu antigen R)
protein.
Length = 326
Score = 38.7 bits (86), Expect = 0.012
Identities = 22/80 (27%), Positives = 36/80 (45%)
Frame = +3
Query: 129 GMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEA 308
G +L V+ L T ++LR +F GEV + RD+ S E A
Sbjct: 18 GRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERA 77
Query: 309 LDSLDGRMLDGRELRVQMAR 368
+++L+G L + ++V AR
Sbjct: 78 INTLNGLRLQSKTIKVSYAR 97
Score = 34.3 bits (75), Expect = 0.25
Identities = 22/84 (26%), Positives = 35/84 (41%)
Frame = +3
Query: 90 IKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXX 269
IK+SY RP + +L + L T +D+ +F R G + + + D+ T S
Sbjct: 91 IKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVA 150
Query: 270 XXXXXXXXXXEEALDSLDGRMLDG 341
EEA+ S +G G
Sbjct: 151 FIRFDKRSEAEEAITSFNGHKPPG 174
>AY130299-1|AAN05429.1| 616|Homo sapiens tCstF-64 protein.
Length = 616
Score = 38.7 bits (86), Expect = 0.012
Identities = 25/86 (29%), Positives = 35/86 (40%)
Frame = +3
Query: 108 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXX 287
R P + S+ V N+ Y T E L+ +F G V + DR T +
Sbjct: 7 RDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQD 66
Query: 288 XXXXEEALDSLDGRMLDGRELRVQMA 365
A+ +L+GR GR LRV A
Sbjct: 67 QETALSAMRNLNGREFSGRALRVDNA 92
>AY033998-1|AAK57541.1| 380|Homo sapiens HUDPRO1 protein.
Length = 380
Score = 38.7 bits (86), Expect = 0.012
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEE 305
D +L V+ L T E+ R +F GE+ + RD+ T +S E+
Sbjct: 43 DSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 102
Query: 306 ALDSLDGRMLDGRELRVQMAR 368
A+++L+G L + ++V AR
Sbjct: 103 AINTLNGLRLQTKTIKVSYAR 123
Score = 31.9 bits (69), Expect = 1.4
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +3
Query: 90 IKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXX 269
IK+SY RP +L V L T ++L ++F + G + I D+ T S
Sbjct: 117 IKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVG 176
Query: 270 XXXXXXXXXXEEALDSLDGRMLDG 341
EEA+ L+G+ G
Sbjct: 177 FIRFDKRIEAEEAIKGLNGQKPSG 200
>AY033997-1|AAK57540.1| 366|Homo sapiens HUD1 protein.
Length = 366
Score = 38.7 bits (86), Expect = 0.012
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEE 305
D +L V+ L T E+ R +F GE+ + RD+ T +S E+
Sbjct: 43 DSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 102
Query: 306 ALDSLDGRMLDGRELRVQMAR 368
A+++L+G L + ++V AR
Sbjct: 103 AINTLNGLRLQTKTIKVSYAR 123
Score = 31.9 bits (69), Expect = 1.4
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +3
Query: 90 IKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXX 269
IK+SY RP +L V L T ++L ++F + G + I D+ T S
Sbjct: 117 IKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVG 176
Query: 270 XXXXXXXXXXEEALDSLDGRMLDG 341
EEA+ L+G+ G
Sbjct: 177 FIRFDKRIEAEEAIKGLNGQKPSG 200
>AY033996-1|AAK57539.1| 383|Homo sapiens HUD4 protein.
Length = 383
Score = 38.7 bits (86), Expect = 0.012
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEE 305
D +L V+ L T E+ R +F GE+ + RD+ T +S E+
Sbjct: 60 DSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 119
Query: 306 ALDSLDGRMLDGRELRVQMAR 368
A+++L+G L + ++V AR
Sbjct: 120 AINTLNGLRLQTKTIKVSYAR 140
Score = 31.9 bits (69), Expect = 1.4
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +3
Query: 90 IKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXX 269
IK+SY RP +L V L T ++L ++F + G + I D+ T S
Sbjct: 134 IKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVG 193
Query: 270 XXXXXXXXXXEEALDSLDGRMLDG 341
EEA+ L+G+ G
Sbjct: 194 FIRFDKRIEAEEAIKGLNGQKPSG 217
>AY033995-1|AAK57538.1| 366|Homo sapiens HUD3 protein.
Length = 366
Score = 38.7 bits (86), Expect = 0.012
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEE 305
D +L V+ L T E+ R +F GE+ + RD+ T +S E+
Sbjct: 43 DSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 102
Query: 306 ALDSLDGRMLDGRELRVQMAR 368
A+++L+G L + ++V AR
Sbjct: 103 AINTLNGLRLQTKTIKVSYAR 123
Score = 31.9 bits (69), Expect = 1.4
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +3
Query: 90 IKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXX 269
IK+SY RP +L V L T ++L ++F + G + I D+ T S
Sbjct: 117 IKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVG 176
Query: 270 XXXXXXXXXXEEALDSLDGRMLDG 341
EEA+ L+G+ G
Sbjct: 177 FIRFDKRIEAEEAIKGLNGQKPSG 200
>AL592182-6|CAI15792.1| 385|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 385
Score = 38.7 bits (86), Expect = 0.012
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEE 305
D +L V+ L T E+ R +F GE+ + RD+ T +S E+
Sbjct: 48 DSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 107
Query: 306 ALDSLDGRMLDGRELRVQMAR 368
A+++L+G L + ++V AR
Sbjct: 108 AINTLNGLRLQTKTIKVSYAR 128
Score = 31.9 bits (69), Expect = 1.4
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +3
Query: 90 IKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXX 269
IK+SY RP +L V L T ++L ++F + G + I D+ T S
Sbjct: 122 IKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVG 181
Query: 270 XXXXXXXXXXEEALDSLDGRMLDG 341
EEA+ L+G+ G
Sbjct: 182 FIRFDKRIEAEEAIKGLNGQKPSG 205
>AL592182-5|CAI15793.1| 371|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 371
Score = 38.7 bits (86), Expect = 0.012
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEE 305
D +L V+ L T E+ R +F GE+ + RD+ T +S E+
Sbjct: 48 DSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 107
Query: 306 ALDSLDGRMLDGRELRVQMAR 368
A+++L+G L + ++V AR
Sbjct: 108 AINTLNGLRLQTKTIKVSYAR 128
Score = 31.9 bits (69), Expect = 1.4
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +3
Query: 90 IKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXX 269
IK+SY RP +L V L T ++L ++F + G + I D+ T S
Sbjct: 122 IKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVG 181
Query: 270 XXXXXXXXXXEEALDSLDGRMLDG 341
EEA+ L+G+ G
Sbjct: 182 FIRFDKRIEAEEAIKGLNGQKPSG 205
>AL592182-4|CAI15791.1| 380|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 380
Score = 38.7 bits (86), Expect = 0.012
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEE 305
D +L V+ L T E+ R +F GE+ + RD+ T +S E+
Sbjct: 43 DSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 102
Query: 306 ALDSLDGRMLDGRELRVQMAR 368
A+++L+G L + ++V AR
Sbjct: 103 AINTLNGLRLQTKTIKVSYAR 123
Score = 31.9 bits (69), Expect = 1.4
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +3
Query: 90 IKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXX 269
IK+SY RP +L V L T ++L ++F + G + I D+ T S
Sbjct: 117 IKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVG 176
Query: 270 XXXXXXXXXXEEALDSLDGRMLDG 341
EEA+ L+G+ G
Sbjct: 177 FIRFDKRIEAEEAIKGLNGQKPSG 200
>AL592182-3|CAI15790.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 38.7 bits (86), Expect = 0.012
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEE 305
D +L V+ L T E+ R +F GE+ + RD+ T +S E+
Sbjct: 43 DSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 102
Query: 306 ALDSLDGRMLDGRELRVQMAR 368
A+++L+G L + ++V AR
Sbjct: 103 AINTLNGLRLQTKTIKVSYAR 123
Score = 31.9 bits (69), Expect = 1.4
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +3
Query: 90 IKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXX 269
IK+SY RP +L V L T ++L ++F + G + I D+ T S
Sbjct: 117 IKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVG 176
Query: 270 XXXXXXXXXXEEALDSLDGRMLDG 341
EEA+ L+G+ G
Sbjct: 177 FIRFDKRIEAEEAIKGLNGQKPSG 200
>AL592182-2|CAI15789.1| 383|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 383
Score = 38.7 bits (86), Expect = 0.012
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEE 305
D +L V+ L T E+ R +F GE+ + RD+ T +S E+
Sbjct: 60 DSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 119
Query: 306 ALDSLDGRMLDGRELRVQMAR 368
A+++L+G L + ++V AR
Sbjct: 120 AINTLNGLRLQTKTIKVSYAR 140
Score = 31.9 bits (69), Expect = 1.4
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +3
Query: 90 IKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXX 269
IK+SY RP +L V L T ++L ++F + G + I D+ T S
Sbjct: 134 IKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVG 193
Query: 270 XXXXXXXXXXEEALDSLDGRMLDG 341
EEA+ L+G+ G
Sbjct: 194 FIRFDKRIEAEEAIKGLNGQKPSG 217
>AL592182-1|CAI15788.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 38.7 bits (86), Expect = 0.012
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEE 305
D +L V+ L T E+ R +F GE+ + RD+ T +S E+
Sbjct: 43 DSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 102
Query: 306 ALDSLDGRMLDGRELRVQMAR 368
A+++L+G L + ++V AR
Sbjct: 103 AINTLNGLRLQTKTIKVSYAR 123
Score = 31.9 bits (69), Expect = 1.4
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +3
Query: 90 IKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXX 269
IK+SY RP +L V L T ++L ++F + G + I D+ T S
Sbjct: 117 IKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVG 176
Query: 270 XXXXXXXXXXEEALDSLDGRMLDG 341
EEA+ L+G+ G
Sbjct: 177 FIRFDKRIEAEEAIKGLNGQKPSG 200
>AL583843-6|CAI14638.1| 385|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 385
Score = 38.7 bits (86), Expect = 0.012
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEE 305
D +L V+ L T E+ R +F GE+ + RD+ T +S E+
Sbjct: 48 DSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 107
Query: 306 ALDSLDGRMLDGRELRVQMAR 368
A+++L+G L + ++V AR
Sbjct: 108 AINTLNGLRLQTKTIKVSYAR 128
Score = 31.9 bits (69), Expect = 1.4
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +3
Query: 90 IKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXX 269
IK+SY RP +L V L T ++L ++F + G + I D+ T S
Sbjct: 122 IKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVG 181
Query: 270 XXXXXXXXXXEEALDSLDGRMLDG 341
EEA+ L+G+ G
Sbjct: 182 FIRFDKRIEAEEAIKGLNGQKPSG 205
>AL583843-5|CAI14639.1| 371|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 371
Score = 38.7 bits (86), Expect = 0.012
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEE 305
D +L V+ L T E+ R +F GE+ + RD+ T +S E+
Sbjct: 48 DSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 107
Query: 306 ALDSLDGRMLDGRELRVQMAR 368
A+++L+G L + ++V AR
Sbjct: 108 AINTLNGLRLQTKTIKVSYAR 128
Score = 31.9 bits (69), Expect = 1.4
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +3
Query: 90 IKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXX 269
IK+SY RP +L V L T ++L ++F + G + I D+ T S
Sbjct: 122 IKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVG 181
Query: 270 XXXXXXXXXXEEALDSLDGRMLDG 341
EEA+ L+G+ G
Sbjct: 182 FIRFDKRIEAEEAIKGLNGQKPSG 205
>AL583843-4|CAI14637.1| 380|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 380
Score = 38.7 bits (86), Expect = 0.012
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEE 305
D +L V+ L T E+ R +F GE+ + RD+ T +S E+
Sbjct: 43 DSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 102
Query: 306 ALDSLDGRMLDGRELRVQMAR 368
A+++L+G L + ++V AR
Sbjct: 103 AINTLNGLRLQTKTIKVSYAR 123
Score = 31.9 bits (69), Expect = 1.4
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +3
Query: 90 IKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXX 269
IK+SY RP +L V L T ++L ++F + G + I D+ T S
Sbjct: 117 IKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVG 176
Query: 270 XXXXXXXXXXEEALDSLDGRMLDG 341
EEA+ L+G+ G
Sbjct: 177 FIRFDKRIEAEEAIKGLNGQKPSG 200
>AL583843-3|CAI14636.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 38.7 bits (86), Expect = 0.012
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEE 305
D +L V+ L T E+ R +F GE+ + RD+ T +S E+
Sbjct: 43 DSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 102
Query: 306 ALDSLDGRMLDGRELRVQMAR 368
A+++L+G L + ++V AR
Sbjct: 103 AINTLNGLRLQTKTIKVSYAR 123
Score = 31.9 bits (69), Expect = 1.4
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +3
Query: 90 IKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXX 269
IK+SY RP +L V L T ++L ++F + G + I D+ T S
Sbjct: 117 IKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVG 176
Query: 270 XXXXXXXXXXEEALDSLDGRMLDG 341
EEA+ L+G+ G
Sbjct: 177 FIRFDKRIEAEEAIKGLNGQKPSG 200
>AL583843-2|CAI14635.1| 383|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 383
Score = 38.7 bits (86), Expect = 0.012
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEE 305
D +L V+ L T E+ R +F GE+ + RD+ T +S E+
Sbjct: 60 DSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 119
Query: 306 ALDSLDGRMLDGRELRVQMAR 368
A+++L+G L + ++V AR
Sbjct: 120 AINTLNGLRLQTKTIKVSYAR 140
Score = 31.9 bits (69), Expect = 1.4
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +3
Query: 90 IKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXX 269
IK+SY RP +L V L T ++L ++F + G + I D+ T S
Sbjct: 134 IKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVG 193
Query: 270 XXXXXXXXXXEEALDSLDGRMLDG 341
EEA+ L+G+ G
Sbjct: 194 FIRFDKRIEAEEAIKGLNGQKPSG 217
>AL583843-1|CAI14634.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 38.7 bits (86), Expect = 0.012
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEE 305
D +L V+ L T E+ R +F GE+ + RD+ T +S E+
Sbjct: 43 DSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 102
Query: 306 ALDSLDGRMLDGRELRVQMAR 368
A+++L+G L + ++V AR
Sbjct: 103 AINTLNGLRLQTKTIKVSYAR 123
Score = 31.9 bits (69), Expect = 1.4
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +3
Query: 90 IKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXX 269
IK+SY RP +L V L T ++L ++F + G + I D+ T S
Sbjct: 117 IKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVG 176
Query: 270 XXXXXXXXXXEEALDSLDGRMLDG 341
EEA+ L+G+ G
Sbjct: 177 FIRFDKRIEAEEAIKGLNGQKPSG 200
>Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 38.3 bits (85), Expect = 0.016
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +3
Query: 117 PRID-GMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXX 293
P +D + S+ V N+ Y T E L+ +F G V + DR T +
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQE 68
Query: 294 XXEEALDSLDGRMLDGRELRVQMA 365
A+ +L+GR GR LRV A
Sbjct: 69 TALSAMRNLNGREFSGRALRVDNA 92
>Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 38.3 bits (85), Expect = 0.016
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +3
Query: 117 PRID-GMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXX 293
P +D + S+ V N+ Y T E L+ +F G V + DR T +
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQE 68
Query: 294 XXEEALDSLDGRMLDGRELRVQMA 365
A+ +L+GR GR LRV A
Sbjct: 69 TALSAMRNLNGREFSGRALRVDNA 92
>Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein.
Length = 391
Score = 38.3 bits (85), Expect = 0.016
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSL 320
L + L T + L VF + G + ++ + +DR T +S ++A +
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 321 DGRMLDGRELRVQMA 365
+G+ LDG+ ++V+ A
Sbjct: 70 NGKSLDGKAIKVEQA 84
>U28686-1|AAB17212.1| 157|Homo sapiens RNPL protein.
Length = 157
Score = 38.3 bits (85), Expect = 0.016
Identities = 20/75 (26%), Positives = 34/75 (45%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSL 320
L V L + T + L F G + ++ + +DR T+ S A+ ++
Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAM 67
Query: 321 DGRMLDGRELRVQMA 365
+G LDGR++RV A
Sbjct: 68 NGESLDGRQIRVDHA 82
>M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation factor
protein.
Length = 577
Score = 38.3 bits (85), Expect = 0.016
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +3
Query: 117 PRID-GMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXX 293
P +D + S+ V N+ Y T E L+ +F G V + DR T +
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQE 68
Query: 294 XXEEALDSLDGRMLDGRELRVQMA 365
A+ +L+GR GR LRV A
Sbjct: 69 TALSAMRNLNGREFSGRALRVDNA 92
>BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 38.3 bits (85), Expect = 0.016
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +3
Query: 117 PRID-GMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXX 293
P +D + S+ V N+ Y T E L+ +F G V + DR T +
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQE 68
Query: 294 XXEEALDSLDGRMLDGRELRVQMA 365
A+ +L+GR GR LRV A
Sbjct: 69 TALSAMRNLNGREFSGRALRVDNA 92
>BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage
stimulation factor, 3' pre-RNA, subunit 2, 64kD protein.
Length = 559
Score = 38.3 bits (85), Expect = 0.016
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +3
Query: 117 PRID-GMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXX 293
P +D + S+ V N+ Y T E L+ +F G V + DR T +
Sbjct: 8 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQE 67
Query: 294 XXEEALDSLDGRMLDGRELRVQMA 365
A+ +L+GR GR LRV A
Sbjct: 68 TALSAMRNLNGREFSGRALRVDNA 91
>BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 38.3 bits (85), Expect = 0.016
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +3
Query: 117 PRID-GMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXX 293
P +D + S+ V N+ Y T E L+ +F G V + DR T +
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQE 68
Query: 294 XXEEALDSLDGRMLDGRELRVQMA 365
A+ +L+GR GR LRV A
Sbjct: 69 TALSAMRNLNGREFSGRALRVDNA 92
>BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 38.3 bits (85), Expect = 0.016
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSL 320
L + L T + L VF + G + ++ + +DR T +S ++A +
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 321 DGRMLDGRELRVQMA 365
+G+ LDG+ ++V+ A
Sbjct: 70 NGKSLDGKAIKVEQA 84
>BC006825-1|AAH06825.1| 157|Homo sapiens RNA binding motif (RNP1,
RRM) protein 3 protein.
Length = 157
Score = 38.3 bits (85), Expect = 0.016
Identities = 20/75 (26%), Positives = 34/75 (45%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSL 320
L V L + T + L F G + ++ + +DR T+ S A+ ++
Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAM 67
Query: 321 DGRMLDGRELRVQMA 365
+G LDGR++RV A
Sbjct: 68 NGESLDGRQIRVDHA 82
>BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 38.3 bits (85), Expect = 0.016
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSL 320
L + L T + L VF + G + ++ + +DR T +S ++A +
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 321 DGRMLDGRELRVQMA 365
+G+ LDG+ ++V+ A
Sbjct: 70 NGKSLDGKAIKVEQA 84
>AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear
ribonucleoprotein G protein.
Length = 391
Score = 38.3 bits (85), Expect = 0.016
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSL 320
L + L T + L VF + G + ++ + +DR T +S ++A +
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 321 DGRMLDGRELRVQMA 365
+G+ LDG+ ++V+ A
Sbjct: 70 NGKSLDGKAIKVEQA 84
>AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 38.3 bits (85), Expect = 0.016
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSL 320
L + L T + L VF + G + ++ + +DR T +S ++A +
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 321 DGRMLDGRELRVQMA 365
+G+ LDG+ ++V+ A
Sbjct: 70 NGKSLDGKAIKVEQA 84
>AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein.
Length = 391
Score = 38.3 bits (85), Expect = 0.016
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSL 320
L + L T + L VF + G + ++ + +DR T +S ++A +
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 321 DGRMLDGRELRVQMA 365
+G+ LDG+ ++V+ A
Sbjct: 70 NGKSLDGKAIKVEQA 84
>DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein.
Length = 384
Score = 37.9 bits (84), Expect = 0.021
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSL 320
L + L T + L VF + G + ++ + +DR T +S ++A +
Sbjct: 10 LFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 321 DGRMLDGRELRVQMA 365
+G+ LDG+ ++V+ A
Sbjct: 70 NGKSLDGKAIKVEQA 84
>BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 37.9 bits (84), Expect = 0.021
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSL 320
L + L T + L VF + G + ++ + +DR T +S ++A +
Sbjct: 10 LFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 321 DGRMLDGRELRVQMA 365
+G+ LDG+ ++V+ A
Sbjct: 70 NGKSLDGKAIKVEQA 84
>AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 159
Score = 37.9 bits (84), Expect = 0.021
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSL 320
L + L T + L VF + G + ++ + +DR T +S ++A +
Sbjct: 10 LFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 321 DGRMLDGRELRVQMA 365
+G+ LDG+ ++V+ A
Sbjct: 70 NGKSLDGKAIKVEQA 84
>AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 37.9 bits (84), Expect = 0.021
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSL 320
L + L T + L VF + G + ++ + +DR T +S ++A +
Sbjct: 10 LFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 321 DGRMLDGRELRVQMA 365
+G+ LDG+ ++V+ A
Sbjct: 70 NGKSLDGKAIKVEQA 84
>AY547318-1|AAS55633.1| 236|Homo sapiens unknown protein.
Length = 236
Score = 37.5 bits (83), Expect = 0.027
Identities = 23/76 (30%), Positives = 32/76 (42%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDG 326
V L Y TT LR+ FE GE+ + + DR T +S E A
Sbjct: 15 VGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD-PN 73
Query: 327 RMLDGRELRVQMARYG 374
++DGR+ V +A G
Sbjct: 74 PIIDGRKANVNLAYLG 89
>AL136305-1|CAC36889.1| 236|Homo sapiens protein ( Human DNA
sequence from clone RP1-259A10 on chromosome 6p22.1-23
Contains the gene for an ssDNA binding protein and a CpG
island. ).
Length = 236
Score = 37.5 bits (83), Expect = 0.027
Identities = 23/76 (30%), Positives = 32/76 (42%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDG 326
V L Y TT LR+ FE GE+ + + DR T +S E A
Sbjct: 15 VGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD-PN 73
Query: 327 RMLDGRELRVQMARYG 374
++DGR+ V +A G
Sbjct: 74 PIIDGRKANVNLAYLG 89
>AK095016-1|BAC04474.1| 211|Homo sapiens protein ( Homo sapiens
cDNA FLJ37697 fis, clone BRHIP2015360, highly similar to
Xenopus laevis RRM-containing protein SEB-4 mRNA. ).
Length = 211
Score = 37.5 bits (83), Expect = 0.027
Identities = 23/76 (30%), Positives = 32/76 (42%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDG 326
V L Y TT LR+ FE GE+ + + DR T +S E A
Sbjct: 15 VGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD-PN 73
Query: 327 RMLDGRELRVQMARYG 374
++DGR+ V +A G
Sbjct: 74 PIIDGRKANVNLAYLG 89
>Z95327-4|CAI42681.1| 225|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 225
Score = 37.1 bits (82), Expect = 0.036
Identities = 22/74 (29%), Positives = 31/74 (41%)
Frame = +3
Query: 144 KVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLD 323
+V N+ Y T E L+ +F G V + DR T + A+ +L+
Sbjct: 10 RVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLN 69
Query: 324 GRMLDGRELRVQMA 365
GR GR LRV A
Sbjct: 70 GREFSGRALRVDNA 83
>AK222574-1|BAD96294.1| 616|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
variant protein.
Length = 616
Score = 36.7 bits (81), Expect = 0.048
Identities = 24/86 (27%), Positives = 35/86 (40%)
Frame = +3
Query: 108 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXX 287
R P + S+ V ++ Y T E L+ +F G V + DR T +
Sbjct: 7 RDPAMDRSLRSVFVGSIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQD 66
Query: 288 XXXXEEALDSLDGRMLDGRELRVQMA 365
A+ +L+GR GR LRV A
Sbjct: 67 QETALSAMRNLNGREFSGRALRVDNA 92
>AF279289-1|AAF82129.1| 386|Homo sapiens testes-specific
heterogenous nuclear ribonucleoprotein G-T protein.
Length = 386
Score = 34.3 bits (75), Expect = 0.25
Identities = 17/75 (22%), Positives = 34/75 (45%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSL 320
L + L T + L F + G + ++ + +DR T +S + A+ +
Sbjct: 4 LFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAVRDM 63
Query: 321 DGRMLDGRELRVQMA 365
+G+ LDG+ ++V A
Sbjct: 64 NGKSLDGKAIKVAQA 78
>M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein.
Length = 707
Score = 33.9 bits (74), Expect = 0.34
Identities = 21/75 (28%), Positives = 40/75 (53%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDS 317
+L + NL+Y T E L+ VFE+ I +P+++ +S +EAL+S
Sbjct: 487 TLVLSNLSYSATEETLQEVFEK---ATFIKVPQNQ-NGKSKGYAFIEFASFEDAKEALNS 542
Query: 318 LDGRMLDGRELRVQM 362
+ R ++GR +R+++
Sbjct: 543 CNKREIEGRAIRLEL 557
>BC066549-1|AAH66549.1| 474|Homo sapiens RNA binding motif protein
45 protein.
Length = 474
Score = 33.9 bits (74), Expect = 0.34
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +3
Query: 171 TPED-LRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRML---D 338
TPE LR F G++ DI++ RD++T+ES A++ + G+ L D
Sbjct: 36 TPESVLRERFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQACRAMEEMHGQCLGPND 95
Query: 339 GRELRVQMAR 368
+ ++V +A+
Sbjct: 96 TKPIKVFIAQ 105
>BC037837-1|AAH37837.2| 248|Homo sapiens Unknown (protein for
MGC:42237) protein.
Length = 248
Score = 33.9 bits (74), Expect = 0.34
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = +3
Query: 171 TPED-LRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRML---D 338
TPE LR F G++ DI++ RD++T+ES A++ + G+ L D
Sbjct: 36 TPESVLRERFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQACRAMEEMHGQCLGPND 95
Query: 339 GRELRVQMARYG 374
+ ++V++ G
Sbjct: 96 TKPIKVRVPGSG 107
>BC006516-1|AAH06516.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 33.9 bits (74), Expect = 0.34
Identities = 21/75 (28%), Positives = 40/75 (53%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDS 317
+L + NL+Y T E L+ VFE+ I +P+++ +S +EAL+S
Sbjct: 259 TLVLSNLSYSATEETLQEVFEK---ATFIKVPQNQ-NGKSKGYAFIEFASFEDAKEALNS 314
Query: 318 LDGRMLDGRELRVQM 362
+ R ++GR +R+++
Sbjct: 315 CNKREIEGRAIRLEL 329
>BC006494-1|AAH06494.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 33.9 bits (74), Expect = 0.34
Identities = 21/75 (28%), Positives = 40/75 (53%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDS 317
+L + NL+Y T E L+ VFE+ I +P+++ +S +EAL+S
Sbjct: 259 TLVLSNLSYSATEETLQEVFEK---ATFIKVPQNQ-NGKSKGYAFIEFASFEDAKEALNS 314
Query: 318 LDGRMLDGRELRVQM 362
+ R ++GR +R+++
Sbjct: 315 CNKREIEGRAIRLEL 329
>BC002343-1|AAH02343.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 33.9 bits (74), Expect = 0.34
Identities = 21/75 (28%), Positives = 40/75 (53%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDS 317
+L + NL+Y T E L+ VFE+ I +P+++ +S +EAL+S
Sbjct: 259 TLVLSNLSYSATEETLQEVFEK---ATFIKVPQNQ-NGKSKGYAFIEFASFEDAKEALNS 314
Query: 318 LDGRMLDGRELRVQM 362
+ R ++GR +R+++
Sbjct: 315 CNKREIEGRAIRLEL 329
>AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens
cDNA FLJ45706 fis, clone FEBRA2028457, highly similar
to Nucleolin. ).
Length = 603
Score = 33.9 bits (74), Expect = 0.34
Identities = 21/75 (28%), Positives = 40/75 (53%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDS 317
+L + NL+Y T E L+ VFE+ I +P+++ +S +EAL+S
Sbjct: 380 TLVLSNLSYSATEETLQEVFEK---ATFIKVPQNQ-NGKSKGYAFIEFASFEDAKEALNS 435
Query: 318 LDGRMLDGRELRVQM 362
+ R ++GR +R+++
Sbjct: 436 CNKREIEGRAIRLEL 450
>AF526533-1|AAM88417.1| 328|Homo sapiens putative RNA binding
protein RB-1 protein.
Length = 328
Score = 33.9 bits (74), Expect = 0.34
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +3
Query: 171 TPED-LRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRML---D 338
TPE LR F G++ DI++ RD++T+ES A++ + G+ L D
Sbjct: 36 TPESVLRERFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQACRAMEEMHGQCLGPND 95
Query: 339 GRELRVQMAR 368
+ ++V +A+
Sbjct: 96 TKPIKVFIAQ 105
>AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein.
Length = 710
Score = 33.9 bits (74), Expect = 0.34
Identities = 21/75 (28%), Positives = 40/75 (53%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDS 317
+L + NL+Y T E L+ VFE+ I +P+++ +S +EAL+S
Sbjct: 487 TLVLSNLSYSATEETLQEVFEK---ATFIKVPQNQ-NGKSKGYAFIEFASFEDAKEALNS 542
Query: 318 LDGRMLDGRELRVQM 362
+ R ++GR +R+++
Sbjct: 543 CNKREIEGRAIRLEL 557
>AB036991-1|BAC16207.1| 476|Homo sapiens developmentally regulated
RNA-binding protein 1 protein.
Length = 476
Score = 33.9 bits (74), Expect = 0.34
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +3
Query: 171 TPED-LRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRML---D 338
TPE LR F G++ DI++ RD++T+ES A++ + G+ L D
Sbjct: 36 TPESVLRERFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQACRAMEEMHGQCLGPND 95
Query: 339 GRELRVQMAR 368
+ ++V +A+
Sbjct: 96 TKPIKVFIAQ 105
>U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein.
Length = 331
Score = 33.5 bits (73), Expect = 0.44
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDS--- 317
V L++ T+ +DL+ F + GEV D I D T S E+ LD
Sbjct: 72 VGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEH 131
Query: 318 -LDGRMLDGRE 347
LDGR++D ++
Sbjct: 132 RLDGRVIDPKK 142
>M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein
protein.
Length = 284
Score = 33.5 bits (73), Expect = 0.44
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDS--- 317
V L++ T+ +DL+ F + GEV D I D T S E+ LD
Sbjct: 72 VGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEH 131
Query: 318 -LDGRMLDGRE 347
LDGR++D ++
Sbjct: 132 RLDGRVIDPKK 142
>BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 332
Score = 33.5 bits (73), Expect = 0.44
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDS--- 317
V L++ T+ +DL+ F + GEV D I D T S E+ LD
Sbjct: 74 VGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEH 133
Query: 318 -LDGRMLDGRE 347
LDGR++D ++
Sbjct: 134 RLDGRVIDPKK 144
>BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 33.5 bits (73), Expect = 0.44
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDS--- 317
V L++ T+ +DL+ F + GEV D I D T S E+ LD
Sbjct: 74 VGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEH 133
Query: 318 -LDGRMLDGRE 347
LDGR++D ++
Sbjct: 134 RLDGRVIDPKK 144
>BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 33.5 bits (73), Expect = 0.44
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDS--- 317
V L++ T+ +DL+ F + GEV D I D T S E+ LD
Sbjct: 74 VGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEH 133
Query: 318 -LDGRMLDGRE 347
LDGR++D ++
Sbjct: 134 RLDGRVIDPKK 144
>BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 33.5 bits (73), Expect = 0.44
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDS--- 317
V L++ T+ +DL+ F + GEV D I D T S E+ LD
Sbjct: 74 VGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEH 133
Query: 318 -LDGRMLDGRE 347
LDGR++D ++
Sbjct: 134 RLDGRVIDPKK 144
>BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 33.5 bits (73), Expect = 0.44
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDS--- 317
V L++ T+ +DL+ F + GEV D I D T S E+ LD
Sbjct: 74 VGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEH 133
Query: 318 -LDGRMLDGRE 347
LDGR++D ++
Sbjct: 134 RLDGRVIDPKK 144
>AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein AB isoform a variant protein.
Length = 332
Score = 33.5 bits (73), Expect = 0.44
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDS--- 317
V L++ T+ +DL+ F + GEV D I D T S E+ LD
Sbjct: 74 VGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEH 133
Query: 318 -LDGRMLDGRE 347
LDGR++D ++
Sbjct: 134 RLDGRVIDPKK 144
>AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens
cDNA FLJ40338 fis, clone TESTI2032067, highly similar to
Rattus norvegicus mRNA for type A/B hnRNP protein p40.
).
Length = 332
Score = 33.5 bits (73), Expect = 0.44
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDS--- 317
V L++ T+ +DL+ F + GEV D I D T S E+ LD
Sbjct: 74 VGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEH 133
Query: 318 -LDGRMLDGRE 347
LDGR++D ++
Sbjct: 134 RLDGRVIDPKK 144
>AF069682-1|AAC24858.2| 392|Homo sapiens testes specific
heterogenous nuclear ribonucleoprotein G-T protein.
Length = 392
Score = 33.5 bits (73), Expect = 0.44
Identities = 17/75 (22%), Positives = 33/75 (44%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSL 320
L + L T + L F + G + ++ + +DR T +S + A +
Sbjct: 10 LFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAARDM 69
Query: 321 DGRMLDGRELRVQMA 365
+G+ LDG+ ++V A
Sbjct: 70 NGKSLDGKAIKVAQA 84
>BC105582-1|AAI05583.1| 173|Homo sapiens RBMX2 protein protein.
Length = 173
Score = 33.1 bits (72), Expect = 0.59
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +3
Query: 156 LTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRML 335
L Y T D+ VF + GE+ +I + RD+ T +S A+D+ +G +
Sbjct: 43 LPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKI 102
Query: 336 DGRELRV 356
GR +RV
Sbjct: 103 KGRTIRV 109
>BC033750-1|AAH33750.1| 322|Homo sapiens RNA binding motif protein,
X-linked 2 protein.
Length = 322
Score = 33.1 bits (72), Expect = 0.59
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +3
Query: 156 LTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRML 335
L Y T D+ VF + GE+ +I + RD+ T +S A+D+ +G +
Sbjct: 43 LPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKI 102
Query: 336 DGRELRV 356
GR +RV
Sbjct: 103 KGRTIRV 109
>BC003676-1|AAH03676.1| 163|Homo sapiens Unknown (protein for
IMAGE:3686686) protein.
Length = 163
Score = 33.1 bits (72), Expect = 0.59
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +3
Query: 156 LTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRML 335
L Y T D+ VF + GE+ +I + RD+ T +S A+D+ +G +
Sbjct: 43 LPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKI 102
Query: 336 DGRELRV 356
GR +RV
Sbjct: 103 KGRTIRV 109
>AL050405-1|CAB43745.1| 322|Homo sapiens hypothetical protein
protein.
Length = 322
Score = 33.1 bits (72), Expect = 0.59
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +3
Query: 156 LTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRML 335
L Y T D+ VF + GE+ +I + RD+ T +S A+D+ +G +
Sbjct: 43 LPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKI 102
Query: 336 DGRELRV 356
GR +RV
Sbjct: 103 KGRTIRV 109
>AL035423-8|CAI42444.1| 322|Homo sapiens RNA binding motif protein,
X-linked 2 protein.
Length = 322
Score = 33.1 bits (72), Expect = 0.59
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +3
Query: 156 LTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRML 335
L Y T D+ VF + GE+ +I + RD+ T +S A+D+ +G +
Sbjct: 43 LPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKI 102
Query: 336 DGRELRV 356
GR +RV
Sbjct: 103 KGRTIRV 109
>AF151837-1|AAD34074.1| 351|Homo sapiens CGI-79 protein protein.
Length = 351
Score = 33.1 bits (72), Expect = 0.59
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +3
Query: 156 LTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRML 335
L Y T D+ VF + GE+ +I + RD+ T +S A+D+ +G +
Sbjct: 43 LPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKI 102
Query: 336 DGRELRV 356
GR +RV
Sbjct: 103 KGRTIRV 109
>AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens
cDNA FLJ34423 fis, clone HHDPC2008123, highly similar to
NUCLEOLIN. ).
Length = 687
Score = 32.7 bits (71), Expect = 0.77
Identities = 21/75 (28%), Positives = 39/75 (52%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDS 317
+L + NL+Y T E L+ VFE+ I +P+++ +S +EAL+S
Sbjct: 464 TLVLSNLSYSATEETLQEVFEK---ATFIKVPQNQ-NGKSKGYAFIEFASFEDAKEALNS 519
Query: 318 LDGRMLDGRELRVQM 362
+ R + GR +R+++
Sbjct: 520 CNKREIGGRAIRLEL 534
>U30883-1|AAA93073.1| 344|Homo sapiens SRp55-1 protein.
Length = 344
Score = 32.3 bits (70), Expect = 1.0
Identities = 27/85 (31%), Positives = 41/85 (48%)
Frame = +3
Query: 102 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXX 281
YG PP R + L V+NL+ R + +DL+ + GEV ++R T E
Sbjct: 102 YG-PPVRTE--YRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKER-TNEGVIEFRSYS 157
Query: 282 XXXXXXEEALDSLDGRMLDGRELRV 356
+ ALD LDG ++GR +R+
Sbjct: 158 DM----KRALDKLDGTEINGRNIRL 178
>U30829-1|AAA93072.1| 335|Homo sapiens SRp55-3 protein.
Length = 335
Score = 32.3 bits (70), Expect = 1.0
Identities = 27/85 (31%), Positives = 41/85 (48%)
Frame = +3
Query: 102 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXX 281
YG PP R + L V+NL+ R + +DL+ + GEV ++R T E
Sbjct: 102 YG-PPVRTE--YRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKER-TNEGVIEFRSYS 157
Query: 282 XXXXXXEEALDSLDGRMLDGRELRV 356
+ ALD LDG ++GR +R+
Sbjct: 158 DM----KRALDKLDGTEINGRNIRL 178
>BC006832-1|AAH06832.1| 344|Homo sapiens splicing factor,
arginine/serine-rich 6 protein.
Length = 344
Score = 32.3 bits (70), Expect = 1.0
Identities = 27/85 (31%), Positives = 41/85 (48%)
Frame = +3
Query: 102 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXX 281
YG PP R + L V+NL+ R + +DL+ + GEV ++R T E
Sbjct: 102 YG-PPVRTE--YRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKER-TNEGVIEFRSYS 157
Query: 282 XXXXXXEEALDSLDGRMLDGRELRV 356
+ ALD LDG ++GR +R+
Sbjct: 158 DM----KRALDKLDGTEINGRNIRL 178
>AL031681-3|CAB43960.1| 344|Homo sapiens splicing factor,
arginine/serine-rich 6 protein.
Length = 344
Score = 32.3 bits (70), Expect = 1.0
Identities = 27/85 (31%), Positives = 41/85 (48%)
Frame = +3
Query: 102 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXX 281
YG PP R + L V+NL+ R + +DL+ + GEV ++R T E
Sbjct: 102 YG-PPVRTE--YRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKER-TNEGVIEFRSYS 157
Query: 282 XXXXXXEEALDSLDGRMLDGRELRV 356
+ ALD LDG ++GR +R+
Sbjct: 158 DM----KRALDKLDGTEINGRNIRL 178
>AB208976-1|BAD92213.1| 279|Homo sapiens arginine/serine-rich
splicing factor 6 variant protein.
Length = 279
Score = 32.3 bits (70), Expect = 1.0
Identities = 27/85 (31%), Positives = 41/85 (48%)
Frame = +3
Query: 102 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXX 281
YG PP R + L V+NL+ R + +DL+ + GEV ++R T E
Sbjct: 136 YG-PPVRTE--YRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKER-TNEGVIEFRSYS 191
Query: 282 XXXXXXEEALDSLDGRMLDGRELRV 356
+ ALD LDG ++GR +R+
Sbjct: 192 DM----KRALDKLDGTEINGRNIRL 212
>BC057796-1|AAH57796.1| 392|Homo sapiens RNA binding motif protein,
X-linked-like 2 protein.
Length = 392
Score = 31.9 bits (69), Expect = 1.4
Identities = 16/75 (21%), Positives = 32/75 (42%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSL 320
L + T + L F + G + ++ + +DR T +S + A +
Sbjct: 10 LFIGGFNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAARDM 69
Query: 321 DGRMLDGRELRVQMA 365
+G+ LDG+ ++V A
Sbjct: 70 NGKSLDGKAIKVAQA 84
>AL450998-14|CAH70862.1| 296|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 296
Score = 31.9 bits (69), Expect = 1.4
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPR 236
+L + NL TT DLR +F+R GE+ DI I +
Sbjct: 178 TLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKK 210
>AL450998-10|CAH70858.1| 3664|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 3664
Score = 31.9 bits (69), Expect = 1.4
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPR 236
+L + NL TT DLR +F+R GE+ DI I +
Sbjct: 439 TLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKK 471
>AL096858-1|CAB51072.1| 3261|Homo sapiens hypothetical protein
protein.
Length = 3261
Score = 31.9 bits (69), Expect = 1.4
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPR 236
+L + NL TT DLR +F+R GE+ DI I +
Sbjct: 36 TLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKK 68
>AL034555-6|CAI19528.1| 296|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 296
Score = 31.9 bits (69), Expect = 1.4
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPR 236
+L + NL TT DLR +F+R GE+ DI I +
Sbjct: 178 TLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKK 210
>AL034555-4|CAI19526.1| 3664|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 3664
Score = 31.9 bits (69), Expect = 1.4
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPR 236
+L + NL TT DLR +F+R GE+ DI I +
Sbjct: 439 TLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKK 471
>AF356524-1|AAK52750.1| 3664|Homo sapiens nuclear receptor
transcription cofactor protein.
Length = 3664
Score = 31.9 bits (69), Expect = 1.4
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPR 236
+L + NL TT DLR +F+R GE+ DI I +
Sbjct: 439 TLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKK 471
>BC001526-1|AAH01526.1| 328|Homo sapiens musashi homolog 2
(Drosophila) protein.
Length = 328
Score = 31.5 bits (68), Expect = 1.8
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
+ L+++T+P+ LR F + GE+ + + RD T+ S
Sbjct: 25 IGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRS 61
>AK093888-1|BAC04244.1| 251|Homo sapiens protein ( Homo sapiens
cDNA FLJ36569 fis, clone TRACH2010824, highly similar to
Ribonucleoprotein. ).
Length = 251
Score = 31.5 bits (68), Expect = 1.8
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
+ L+++T+P+ LR F + GE+ + + RD T+ S
Sbjct: 21 IGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRS 57
>CR541805-1|CAG46604.1| 174|Homo sapiens RBM8A protein.
Length = 174
Score = 30.7 bits (66), Expect = 3.1
Identities = 20/82 (24%), Positives = 36/82 (43%)
Frame = +3
Query: 111 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXX 290
P ++G + L V + T ED+ F GE+ +I++ DR T
Sbjct: 66 PQRSVEGWI-LFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETY 124
Query: 291 XXXEEALDSLDGRMLDGRELRV 356
+ A++ L+G+ L G+ + V
Sbjct: 125 KEAQAAMEGLNGQDLMGQPISV 146
>BC071577-1|AAH71577.1| 174|Homo sapiens RNA binding motif protein
8A protein.
Length = 174
Score = 30.7 bits (66), Expect = 3.1
Identities = 20/82 (24%), Positives = 36/82 (43%)
Frame = +3
Query: 111 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXX 290
P ++G + L V + T ED+ F GE+ +I++ DR T
Sbjct: 66 PQRSVEGWI-LFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETY 124
Query: 291 XXXEEALDSLDGRMLDGRELRV 356
+ A++ L+G+ L G+ + V
Sbjct: 125 KEAQAAMEGLNGQDLMGQPISV 146
>BC017088-1|AAH17088.1| 174|Homo sapiens RNA binding motif protein
8A protein.
Length = 174
Score = 30.7 bits (66), Expect = 3.1
Identities = 20/82 (24%), Positives = 36/82 (43%)
Frame = +3
Query: 111 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXX 290
P ++G + L V + T ED+ F GE+ +I++ DR T
Sbjct: 66 PQRSVEGWI-LFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETY 124
Query: 291 XXXEEALDSLDGRMLDGRELRV 356
+ A++ L+G+ L G+ + V
Sbjct: 125 KEAQAAMEGLNGQDLMGQPISV 146
>AF403012-1|AAL26999.1| 174|Homo sapiens ribonucleoprotein RBM8
protein.
Length = 174
Score = 30.7 bits (66), Expect = 3.1
Identities = 20/82 (24%), Positives = 36/82 (43%)
Frame = +3
Query: 111 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXX 290
P ++G + L V + T ED+ F GE+ +I++ DR T
Sbjct: 66 PQRSVEGWI-LFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETY 124
Query: 291 XXXEEALDSLDGRMLDGRELRV 356
+ A++ L+G+ L G+ + V
Sbjct: 125 KEAQAAMEGLNGQDLMGQPISV 146
>AF299118-1|AAG27091.1| 174|Homo sapiens RNA-binding protein Y14
protein.
Length = 174
Score = 30.7 bits (66), Expect = 3.1
Identities = 20/82 (24%), Positives = 36/82 (43%)
Frame = +3
Query: 111 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXX 290
P ++G + L V + T ED+ F GE+ +I++ DR T
Sbjct: 66 PQRSVEGWI-LFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETY 124
Query: 291 XXXEEALDSLDGRMLDGRELRV 356
+ A++ L+G+ L G+ + V
Sbjct: 125 KEAQAAMEGLNGQDLMGQPISV 146
>AF231512-1|AAG16782.1| 158|Homo sapiens RNA binding motif protein
8B protein.
Length = 158
Score = 30.7 bits (66), Expect = 3.1
Identities = 20/82 (24%), Positives = 36/82 (43%)
Frame = +3
Query: 111 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXX 290
P ++G + L V + T ED+ F GE+ +I++ DR T
Sbjct: 50 PQRSVEGWI-LFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETY 108
Query: 291 XXXEEALDSLDGRMLDGRELRV 356
+ A++ L+G+ L G+ + V
Sbjct: 109 KEAQAAMEGLNGQDLMGQPISV 130
>AF231511-1|AAG16781.1| 173|Homo sapiens RNA binding motif protein
8A protein.
Length = 173
Score = 30.7 bits (66), Expect = 3.1
Identities = 20/82 (24%), Positives = 36/82 (43%)
Frame = +3
Query: 111 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXX 290
P ++G + L V + T ED+ F GE+ +I++ DR T
Sbjct: 65 PQRSVEGWI-LFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETY 123
Query: 291 XXXEEALDSLDGRMLDGRELRV 356
+ A++ L+G+ L G+ + V
Sbjct: 124 KEAQAAMEGLNGQDLMGQPISV 145
>AF198620-1|AAF37551.1| 173|Homo sapiens RNA binding motif protein
8 protein.
Length = 173
Score = 30.7 bits (66), Expect = 3.1
Identities = 20/82 (24%), Positives = 36/82 (43%)
Frame = +3
Query: 111 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXX 290
P ++G + L V + T ED+ F GE+ +I++ DR T
Sbjct: 65 PQRSVEGWI-LFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETY 123
Query: 291 XXXEEALDSLDGRMLDGRELRV 356
+ A++ L+G+ L G+ + V
Sbjct: 124 KEAQAAMEGLNGQDLMGQPISV 145
>AF182415-1|AAG14951.1| 158|Homo sapiens MDS014 protein.
Length = 158
Score = 30.7 bits (66), Expect = 3.1
Identities = 20/82 (24%), Positives = 36/82 (43%)
Frame = +3
Query: 111 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXX 290
P ++G + L V + T ED+ F GE+ +I++ DR T
Sbjct: 50 PQRSVEGWI-LFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETY 108
Query: 291 XXXEEALDSLDGRMLDGRELRV 356
+ A++ L+G+ L G+ + V
Sbjct: 109 KEAQAAMEGLNGQDLMGQPISV 130
>AF127761-1|AAD21089.1| 174|Homo sapiens ribonucleoprotein RBM8
protein.
Length = 174
Score = 30.7 bits (66), Expect = 3.1
Identities = 20/82 (24%), Positives = 36/82 (43%)
Frame = +3
Query: 111 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXX 290
P ++G + L V + T ED+ F GE+ +I++ DR T
Sbjct: 66 PQRSVEGWI-LFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETY 124
Query: 291 XXXEEALDSLDGRMLDGRELRV 356
+ A++ L+G+ L G+ + V
Sbjct: 125 KEAQAAMEGLNGQDLMGQPISV 146
>BC130001-1|AAI30002.1| 255|Homo sapiens LOC390748 protein protein.
Length = 255
Score = 30.3 bits (65), Expect = 4.1
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 105 GRPPPRIDG-MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 248
G P +++ S+ V N+ Y + E+L F RCGEV + I D+++
Sbjct: 136 GTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFS 184
>BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif protein
28 protein.
Length = 759
Score = 29.9 bits (64), Expect = 5.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPR 236
D L + NL+++ + +DL+ VF + G V ++ IPR
Sbjct: 111 DKKARLIIRNLSFKCSEDDLKTVFAQFGAVLEVNIPR 147
>AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif protein
28 variant protein.
Length = 759
Score = 29.9 bits (64), Expect = 5.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPR 236
D L + NL+++ + +DL+ VF + G V ++ IPR
Sbjct: 111 DKKARLIIRNLSFKCSEDDLKTVFAQFGAVLEVNIPR 147
>AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens
cDNA FLJ10377 fis, clone NT2RM2001989, weakly similar to
NUCLEOLAR PROTEIN NOP4. ).
Length = 759
Score = 29.9 bits (64), Expect = 5.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPR 236
D L + NL+++ + +DL+ VF + G V ++ IPR
Sbjct: 111 DKKARLIIRNLSFKCSEDDLKTVFAQFGAVLEVNIPR 147
>L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein.
Length = 305
Score = 29.5 bits (63), Expect = 7.2
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR-YTRESXXXXXXXXXXXXXXEEALDSLD 323
+ LT T + + +F G++ I +P +R + S E+AL +D
Sbjct: 165 IGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMD 224
Query: 324 GRMLDGREL 350
G +DG+E+
Sbjct: 225 GGQIDGQEI 233
>BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 29.5 bits (63), Expect = 7.2
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR-YTRESXXXXXXXXXXXXXXEEALDSLD 323
+ LT T + + +F G++ I +P +R + S E+AL +D
Sbjct: 165 IGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMD 224
Query: 324 GRMLDGREL 350
G +DG+E+
Sbjct: 225 GGQIDGQEI 233
>BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 29.5 bits (63), Expect = 7.2
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR-YTRESXXXXXXXXXXXXXXEEALDSLD 323
+ LT T + + +F G++ I +P +R + S E+AL +D
Sbjct: 165 IGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMD 224
Query: 324 GRMLDGREL 350
G +DG+E+
Sbjct: 225 GGQIDGQEI 233
>BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 29.5 bits (63), Expect = 7.2
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR-YTRESXXXXXXXXXXXXXXEEALDSLD 323
+ LT T + + +F G++ I +P +R + S E+AL +D
Sbjct: 165 IGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMD 224
Query: 324 GRMLDGREL 350
G +DG+E+
Sbjct: 225 GGQIDGQEI 233
>AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor
RNPS1 protein.
Length = 282
Score = 29.5 bits (63), Expect = 7.2
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR-YTRESXXXXXXXXXXXXXXEEALDSLD 323
+ LT T + + +F G++ I +P +R + S E+AL +D
Sbjct: 142 IGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMD 201
Query: 324 GRMLDGREL 350
G +DG+E+
Sbjct: 202 GGQIDGQEI 210
>AF247662-1|AAF72519.1| 228|Homo sapiens SR-related protein LD2
protein.
Length = 228
Score = 29.5 bits (63), Expect = 7.2
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR-YTRESXXXXXXXXXXXXXXEEALDSLD 323
+ LT T + + +F G++ I +P +R + S E+AL +D
Sbjct: 88 IGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMD 147
Query: 324 GRMLDGREL 350
G +DG+E+
Sbjct: 148 GGQIDGQEI 156
>AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein.
Length = 305
Score = 29.5 bits (63), Expect = 7.2
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR-YTRESXXXXXXXXXXXXXXEEALDSLD 323
+ LT T + + +F G++ I +P +R + S E+AL +D
Sbjct: 165 IGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMD 224
Query: 324 GRMLDGREL 350
G +DG+E+
Sbjct: 225 GGQIDGQEI 233
>U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein.
Length = 286
Score = 29.1 bits (62), Expect = 9.5
Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALD---- 314
+ L++ TT +DL+ F + GEV D + D T S ++ +D
Sbjct: 80 IGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEH 139
Query: 315 SLDGRMLDGRELRVQMAR 368
L+G+++D + + +
Sbjct: 140 KLNGKVIDPKRAKAMKTK 157
>M94630-1|AAA35781.1| 328|Homo sapiens DNA-binding protein protein.
Length = 328
Score = 29.1 bits (62), Expect = 9.5
Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALD---- 314
+ L++ TT +DL+ F + GEV D + D T S ++ +D
Sbjct: 80 IGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEH 139
Query: 315 SLDGRMLDGRELRVQMAR 368
L+G+++D + + +
Sbjct: 140 KLNGKVIDPKRAKAMKTK 157
>D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 355
Score = 29.1 bits (62), Expect = 9.5
Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALD---- 314
+ L++ TT +DL+ F + GEV D + D T S ++ +D
Sbjct: 101 IGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEH 160
Query: 315 SLDGRMLDGRELRVQMAR 368
L+G+++D + + +
Sbjct: 161 KLNGKVIDPKRAKAMKTK 178
>D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 215
Score = 29.1 bits (62), Expect = 9.5
Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALD---- 314
+ L++ TT +DL+ F + GEV D + D T S ++ +D
Sbjct: 10 IGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEH 69
Query: 315 SLDGRMLDGRELRVQMAR 368
L+G+++D + + +
Sbjct: 70 KLNGKVIDPKRAKAMKTK 87
>D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 306
Score = 29.1 bits (62), Expect = 9.5
Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALD---- 314
+ L++ TT +DL+ F + GEV D + D T S ++ +D
Sbjct: 101 IGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEH 160
Query: 315 SLDGRMLDGRELRVQMAR 368
L+G+++D + + +
Sbjct: 161 KLNGKVIDPKRAKAMKTK 178
>D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 267
Score = 29.1 bits (62), Expect = 9.5
Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALD---- 314
+ L++ TT +DL+ F + GEV D + D T S ++ +D
Sbjct: 13 IGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEH 72
Query: 315 SLDGRMLDGRELRVQMAR 368
L+G+++D + + +
Sbjct: 73 KLNGKVIDPKRAKAMKTK 90
>D26158-1|BAA21838.1| 350|Homo sapiens PLE21 protein protein.
Length = 350
Score = 29.1 bits (62), Expect = 9.5
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = +3
Query: 90 IKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXX 269
IK+SY RP +L V L + +++ ++F + G + I D+ T S
Sbjct: 101 IKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVG 160
Query: 270 XXXXXXXXXXEEALDSLDG-RMLDGRE 347
EEA+ L+G + L RE
Sbjct: 161 FIRFDKRIEAEEAIKGLNGQKPLGARE 187
>CR541823-1|CAG46622.1| 174|Homo sapiens RBM8A protein.
Length = 174
Score = 29.1 bits (62), Expect = 9.5
Identities = 19/82 (23%), Positives = 35/82 (42%)
Frame = +3
Query: 111 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXX 290
P ++G + L V + T ED+ F GE+ +I++ DR T
Sbjct: 66 PQRSVEGWI-LFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETY 124
Query: 291 XXXEEALDSLDGRMLDGRELRV 356
+ ++ L+G+ L G+ + V
Sbjct: 125 KEAQAVMEGLNGQDLMGQPISV 146
>BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 29.1 bits (62), Expect = 9.5
Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALD---- 314
+ L++ TT +DL+ F + GEV D + D T S ++ +D
Sbjct: 101 IGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEH 160
Query: 315 SLDGRMLDGRELRVQMAR 368
L+G+++D + + +
Sbjct: 161 KLNGKVIDPKRAKAMKTK 178
>BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 29.1 bits (62), Expect = 9.5
Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALD---- 314
+ L++ TT +DL+ F + GEV D + D T S ++ +D
Sbjct: 101 IGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEH 160
Query: 315 SLDGRMLDGRELRVQMAR 368
L+G+++D + + +
Sbjct: 161 KLNGKVIDPKRAKAMKTK 178
>BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 355
Score = 29.1 bits (62), Expect = 9.5
Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALD---- 314
+ L++ TT +DL+ F + GEV D + D T S ++ +D
Sbjct: 101 IGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEH 160
Query: 315 SLDGRMLDGRELRVQMAR 368
L+G+++D + + +
Sbjct: 161 KLNGKVIDPKRAKAMKTK 178
>AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear
ribonucleoprotein D0B protein.
Length = 298
Score = 29.1 bits (62), Expect = 9.5
Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALD---- 314
+ L++ TT +DL+ F + GEV D + D T S ++ +D
Sbjct: 93 IGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEH 152
Query: 315 SLDGRMLDGRELRVQMAR 368
L+G+++D + + +
Sbjct: 153 KLNGKVIDPKRAKAMKTK 170
>AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 336
Score = 29.1 bits (62), Expect = 9.5
Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALD---- 314
+ L++ TT +DL+ F + GEV D + D T S ++ +D
Sbjct: 82 IGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEH 141
Query: 315 SLDGRMLDGRELRVQMAR 368
L+G+++D + + +
Sbjct: 142 KLNGKVIDPKRAKAMKTK 159
>AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 306
Score = 29.1 bits (62), Expect = 9.5
Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALD---- 314
+ L++ TT +DL+ F + GEV D + D T S ++ +D
Sbjct: 101 IGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEH 160
Query: 315 SLDGRMLDGRELRVQMAR 368
L+G+++D + + +
Sbjct: 161 KLNGKVIDPKRAKAMKTK 178
>AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 355
Score = 29.1 bits (62), Expect = 9.5
Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALD---- 314
+ L++ TT +DL+ F + GEV D + D T S ++ +D
Sbjct: 101 IGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEH 160
Query: 315 SLDGRMLDGRELRVQMAR 368
L+G+++D + + +
Sbjct: 161 KLNGKVIDPKRAKAMKTK 178
>AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein.
Length = 355
Score = 29.1 bits (62), Expect = 9.5
Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALD---- 314
+ L++ TT +DL+ F + GEV D + D T S ++ +D
Sbjct: 101 IGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEH 160
Query: 315 SLDGRMLDGRELRVQMAR 368
L+G+++D + + +
Sbjct: 161 KLNGKVIDPKRAKAMKTK 178
>AC003982-3|AAB95636.1| 362|Homo sapiens WUGSC:H_166H1.2 protein.
Length = 362
Score = 29.1 bits (62), Expect = 9.5
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 114 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 248
P + + V L+ TT ED+++ FE+ G+V D + D+ T
Sbjct: 102 PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTT 146
>AB073212-1|BAB70469.1| 179|Homo sapiens Musashi1 protein.
Length = 179
Score = 29.1 bits (62), Expect = 9.5
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 114 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 248
P + + V L+ TT ED+++ FE+ G+V D + D+ T
Sbjct: 36 PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTT 80
>AB072592-1|BAB69769.1| 181|Homo sapiens Musashi1 protein.
Length = 181
Score = 29.1 bits (62), Expect = 9.5
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 114 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 248
P + + V L+ TT ED+++ FE+ G+V D + D+ T
Sbjct: 39 PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTT 83
>AB072591-1|BAB69768.1| 181|Homo sapiens Musashi1 protein.
Length = 181
Score = 29.1 bits (62), Expect = 9.5
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 114 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 248
P + + V L+ TT ED+++ FE+ G+V D + D+ T
Sbjct: 39 PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTT 83
>AB072590-1|BAB69767.1| 180|Homo sapiens Musashi1 protein.
Length = 180
Score = 29.1 bits (62), Expect = 9.5
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 114 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 248
P + + V L+ TT ED+++ FE+ G+V D + D+ T
Sbjct: 39 PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTT 83
>AB012851-1|BAA33962.1| 362|Homo sapiens Musashi protein.
Length = 362
Score = 29.1 bits (62), Expect = 9.5
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 114 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 248
P + + V L+ TT ED+++ FE+ G+V D + D+ T
Sbjct: 102 PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTT 146
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,998,185
Number of Sequences: 237096
Number of extensions: 1117613
Number of successful extensions: 2414
Number of sequences better than 10.0: 191
Number of HSP's better than 10.0 without gapping: 2262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2388
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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