Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_C19
(439 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 25 0.48
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 25 0.48
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 25 0.48
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 22 2.6
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 22 3.4
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 22 3.4
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 22 3.4
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 3.4
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 5.9
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 5.9
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 5.9
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 24.6 bits (51), Expect = 0.48
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 161 ELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLFWRVHALEVSSALAWF 307
E ++ + VS+ + Y N V+ +PI + + LEVSS + WF
Sbjct: 91 ETRFEEIKKEVSSYIKKIGY-NPAAVAFVPISGWHGDNMLEVSSKMPWF 138
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 24.6 bits (51), Expect = 0.48
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 161 ELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLFWRVHALEVSSALAWF 307
E ++ + VS+ + Y N V+ +PI + + LEVSS + WF
Sbjct: 107 ETRFEEIKKEVSSYIKKIGY-NPAAVAFVPISGWHGDNMLEVSSKMPWF 154
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 24.6 bits (51), Expect = 0.48
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 161 ELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLFWRVHALEVSSALAWF 307
E ++ + VS+ + Y N V+ +PI + + LEVSS + WF
Sbjct: 164 ETRFEEIKKEVSSYIKKIGY-NPAAVAFVPISGWHGDNMLEVSSKMPWF 211
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 22.2 bits (45), Expect = 2.6
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +2
Query: 230 FIVSAIPIWLFWRVHALEVSS 292
F+ S P W FW + E S+
Sbjct: 21 FVTSHRPAWWFWTATSHEASA 41
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.8 bits (44), Expect = 3.4
Identities = 10/37 (27%), Positives = 16/37 (43%)
Frame = +2
Query: 254 WLFWRVHALEVSSALAWFVLVTAASTWLLALAYRNTK 364
WL R+ + L + L A+ W+ L + N K
Sbjct: 90 WLDERLRFNDFGGRLKYLTLTDASRVWMPDLFFSNEK 126
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.8 bits (44), Expect = 3.4
Identities = 10/37 (27%), Positives = 16/37 (43%)
Frame = +2
Query: 254 WLFWRVHALEVSSALAWFVLVTAASTWLLALAYRNTK 364
WL R+ + L + L A+ W+ L + N K
Sbjct: 90 WLDERLRFNDFGGRLKYLTLTDASRVWMPDLFFSNEK 126
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.8 bits (44), Expect = 3.4
Identities = 9/25 (36%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = +3
Query: 102 EYYKNIQCQAKEIKHSRRKKSY-CC 173
EYY +++ + R KK Y CC
Sbjct: 194 EYYPSVEWDILGVPAERHKKYYPCC 218
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.8 bits (44), Expect = 3.4
Identities = 9/36 (25%), Positives = 24/36 (66%)
Frame = -2
Query: 333 QVLAAVTKTNHARAELTSRACTLQNNHIGIADTMKA 226
++LAA+ +++H+R++ + A L++ +A ++A
Sbjct: 150 RILAAMQQSSHSRSQEKAVAAELEDEQRLLATVVQA 185
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.0 bits (42), Expect = 5.9
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = +3
Query: 102 EYYKNIQCQAKEIKHSRRKKSYCC 173
E+Y +++ E+ R +K Y C
Sbjct: 203 EFYMSVEWDILEVPAVRNEKFYTC 226
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.0 bits (42), Expect = 5.9
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = +3
Query: 102 EYYKNIQCQAKEIKHSRRKKSYCC 173
E+Y +++ E+ R +K Y C
Sbjct: 203 EFYMSVEWDILEVPAVRNEKFYTC 226
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.0 bits (42), Expect = 5.9
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = +3
Query: 102 EYYKNIQCQAKEIKHSRRKKSYCC 173
E+Y +++ E+ R +K Y C
Sbjct: 199 EFYTSVEWDILEVPAVRNEKFYTC 222
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,915
Number of Sequences: 438
Number of extensions: 2194
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11327868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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